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@@ -6,6 +6,13 @@ Collection of scripts to interact with the Papyrus bioactivity dataset.
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**Associated Article:** <a href="https://doi.org/10.1186/s13321-022-00672-x">10.1186/s13321-022-00672-x</a>
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Béquignon OJM, Bongers BJ, Jespers W, IJzerman AP, van de Water B, van Westen GJP.
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Papyrus - A large scale curated dataset aimed at bioactivity predictions.
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J Cheminform 15, 3 (2023). https://doi.org/10.1186/s13321-022-00672-x
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**Associated Preprint:** <a href="https://doi.org/10.33774/chemrxiv-2021-1rxhk">10.33774/chemrxiv-2021-1rxhk</a>
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Béquignon OJM, Bongers BJ, Jespers W, IJzerman AP, van de Water B, van Westen GJP.
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- [x] Substructure and similarity molecular searches
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- [x] ability to use DNN models
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- [ ] adapt models to QSPRpred
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- [x] ability to repeat model training over multiple seeds
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- [ ] y-scrambling
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- [x] y-scrambling
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- [ ] adapt models to QSPRpred
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## Examples to come
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