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NAMESPACE
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# Generated by roxygen2: do not edit by hand
export(AggregationConfiguration)
export(AllAvailableTasks)
export(ApplicationRanges)
export(ConfigurationPlan)
export(DataSelectionKeys)
export(DataSource)
export(GofPlotTask)
export(LogTypes)
export(MeanModelWorkflow)
export(Output)
export(PkParameterInfo)
export(PlotTask)
export(PopulationPlotTask)
export(PopulationSimulationSet)
export(PopulationWorkflow)
export(PopulationWorkflowTypes)
export(QualificationTask)
export(QualificationVersionInfo)
export(QualificationWorkflow)
export(ResidualScales)
export(SensitivityPlotSettings)
export(SimulationSet)
export(StandardPlotTasks)
export(StandardSimulationTasks)
export(StatisticsTypes)
export(Task)
export(activateWorkflowTasks)
export(addFigureChunk)
export(addLineBreakToCaption)
export(addStudyParameters)
export(addTableChunk)
export(addTextChunk)
export(addUserDefinedTask)
export(addXParametersForDemographyPlot)
export(addXParametersForPKParametersPlot)
export(addXParametersForPkParametersPlot)
export(addYParametersForDemographyPlot)
export(addYParametersForPKParametersPlot)
export(addYParametersForPkParametersPlot)
export(adjustTitlePage)
export(analyzeCoreSensitivity)
export(analyzeSensitivity)
export(anchor)
export(calculateArithmeticErrorRange)
export(calculateGMFE)
export(calculateGeometricErrorRange)
export(checkTaskInputsExist)
export(copyReport)
export(createWorkflowFromExcelInput)
export(displayConfigurationPlanPlotInfo)
export(evalDataFilter)
export(generateResultFileNames)
export(geomean)
export(geomeanDividedBySD)
export(geomeanMultipliedBySD)
export(getAnchorName)
export(getDefaultDemographyXParameters)
export(getDefaultMCRandomSeed)
export(getDefaultMCRepetitions)
export(getDefaultPKParametersXParameters)
export(getDefaultPkParametersXParameters)
export(getDefaultRETheme)
export(getFigurePathsFromReport)
export(getMeanSensitivityAnalysisResultsFileNames)
export(getMolWeightForCompound)
export(getOutputPathsInSimulationSet)
export(getPKAnalysisResultsFileNames)
export(getPKParameterGroupsInOutput)
export(getPKParametersInOutput)
export(getPKParametersInSimulationSet)
export(getPkAnalysisResultsFileNames)
export(getPopulationPKData)
export(getPopulationPKMetaData)
export(getPopulationSensitivityAnalysisResultsFileNames)
export(getRESettings)
export(getReportingEngineInfo)
export(getResiduals)
export(getSelectedData)
export(getSelectedRows)
export(getSimulationDescriptor)
export(getSimulationParameterDisplayPaths)
export(getSimulationResultFileNames)
export(getStatisticsFromType)
export(getTaskInputs)
export(getWorkflowParameterDisplayPaths)
export(getWorkflowReferencePopulationName)
export(getXParametersForDemographyPlot)
export(getXParametersForPKParametersPlot)
export(getXParametersForPkParametersPlot)
export(getYParametersForDemographyPlot)
export(getYParametersForPKParametersPlot)
export(getYParametersForPkParametersPlot)
export(hasAnchor)
export(inactivateWorkflowTasks)
export(isLoadedPackage)
export(isLoadedPopulation)
export(isLoadedSimulation)
export(lastPathElement)
export(loadCalculatePKParametersTask)
export(loadCalculateSensitivityTask)
export(loadConfigurationPlan)
export(loadGOFMergedTask)
export(loadPlotAbsorptionTask)
export(loadPlotDDIRatioTask)
export(loadPlotDemographyTask)
export(loadPlotMassBalanceTask)
export(loadPlotPKParametersTask)
export(loadPlotPKRatioTask)
export(loadPlotSensitivityTask)
export(loadPlotTimeProfilesAndResidualsTask)
export(loadQualificationComparisonTimeProfileTask)
export(loadQualificationTimeProfilesTask)
export(loadQualificationWorkflow)
export(loadRESettings)
export(loadSimulateTask)
export(loadSimulationWithUpdatedPaths)
export(loadStudyDesign)
export(loadWorkflowPopulation)
export(logCatch)
export(logDebug)
export(logError)
export(logInfo)
export(measureValuesBetween)
export(mergeMarkdownFiles)
export(plotAbsorptionTimeProfile)
export(plotDemographyHistogram)
export(plotDemographyRange)
export(plotMeanTimeProfile)
export(plotMeanTimeProfileLog)
export(plotPopTimeProfile)
export(plotPopTimeProfileLog)
export(prettyCaption)
export(ratioBoxplot)
export(reSettingsNames)
export(readObservedDataFile)
export(removeForbiddenLetters)
export(renderReport)
export(renderWordReport)
export(resetRESettingsToDefault)
export(resetReport)
export(saveLogs)
export(saveLogsToJson)
export(saveRESettings)
export(saveTaskResults)
export(setDefaultAutoAxisLimitMargin)
export(setDefaultBins)
export(setDefaultMCRandomSeed)
export(setDefaultMCRepetitions)
export(setDefaultNumericFormat)
export(setDefaultPlotFormat)
export(setDefaultREErrorbarCapSize)
export(setDefaultStairstep)
export(setDefaultTheme)
export(setDefaultThemeFromJson)
export(setDefaultTimeProfileStatistics)
export(setPlotFormat)
export(setSimulationDescriptor)
export(setWorkflowParameterDisplayPaths)
export(setWorkflowParameterDisplayPathsFromFile)
export(setXParametersForDemographyPlot)
export(setXParametersForPKParametersPlot)
export(setXParametersForPkParametersPlot)
export(setYParametersForDemographyPlot)
export(setYParametersForPKParametersPlot)
export(setYParametersForPkParametersPlot)
export(showLogMessages)
export(simulateModelOnCore)
export(startQualificationRunner)
export(trimFileName)
export(updateSimulationIndividualParameters)
export(vpcParameterPlot)
import(dplyr)
import(ggplot2)
import(jsonlite)
import(ospsuite)
import(ospsuite.utils)
import(tidyr)
import(tlf)
import(utils)
importFrom(ospsuite.utils,"%||%")
importFrom(stats,aggregate)
importFrom(stats,approx)
importFrom(stats,median)
importFrom(stats,na.omit)
importFrom(stats,quantile)
importFrom(stats,sd)