From 40527220b89df5e9697964a46c0dcb5a28620df7 Mon Sep 17 00:00:00 2001
From: Vaishnavi Bhandari <vaishnavibhandari.128@gmail.com>
Date: Sun, 26 Jan 2025 18:04:14 +0000
Subject: [PATCH] Functionality for setting size of ghost atom

Signed-off-by: Vaishnavi Bhandari <vaishnavibhandari.128@gmail.com>
---
 avogadro/core/elements.cpp | 7 ++++---
 avogadro/core/elements.h   | 4 ++--
 2 files changed, 6 insertions(+), 5 deletions(-)

diff --git a/avogadro/core/elements.cpp b/avogadro/core/elements.cpp
index cb22229c15..f8256972b7 100644
--- a/avogadro/core/elements.cpp
+++ b/avogadro/core/elements.cpp
@@ -26,7 +26,8 @@ static std::vector<std::string> CustomElementSymbols;
 static std::vector<std::string> CustomElementNames;
 
 // Match carbon's radii
-
+static std::vector<double> CustomElementCovalentRadii;
+static std::vector<double> CustomElementVDWRadii;
 
 inline std::string encodeCustomElement(unsigned char atomicNumber)
 {
@@ -126,14 +127,14 @@ void setCustomElementVDWRadius(unsigned char atomicNumber, double radius)
   }
 }
 } // end anon namespace
-void Elements::setCustomElementCovalentRadius(unsigned char atomicNumber, double radius)
+void setCustomElementCovalentRadius(unsigned char atomicNumber, double radius)
 {
   if (isCustomElement(atomicNumber)) {
     CustomElementCovalentRadii[atomicNumber - CustomElementMin] = radius;
   }
 }
 
-void Elements::setCustomElementVDWRadius(unsigned char atomicNumber, double radius)
+void setCustomElementVDWRadius(unsigned char atomicNumber, double radius)
 {
   if (isCustomElement(atomicNumber)) {
     CustomElementVDWRadii[atomicNumber - CustomElementMin] = radius;
diff --git a/avogadro/core/elements.h b/avogadro/core/elements.h
index 4c76c02022..5ba1b0d5d4 100644
--- a/avogadro/core/elements.h
+++ b/avogadro/core/elements.h
@@ -76,8 +76,8 @@ class AVOGADROCORE_EXPORT Elements
 
   /** @return the mass of the element with the supplied @p atomicNumber. */
   static double mass(unsigned char atomicNumber);
-  static void setCustomElementVDWRadius(unsigned char atomicNumber, double radius);
-  static void setCustomElementCovalentRadius(unsigned char atomicNumber, double radius);
+  static void setCustomElementVDWRadii(unsigned char atomicNumber, double radius);
+  static void setCustomElementCovalentRadii(unsigned char atomicNumber, double radius);
   /**
    * @return the Van der Waals radius of the element with the supplied
    * @p atomicNumber.