diff --git a/README.md b/README.md index cd91a40..bbb62f9 100644 --- a/README.md +++ b/README.md @@ -228,7 +228,7 @@ options: -I, --in2 read2 input file name (string [=]) -O, --out2 read2 output file name (string [=]) -6, --phred64 indicate the input is using phred64 scoring (it'll be converted to phred33, so the output will still be phred33) - -z, --compression compression level for gzip output (1 ~ 9). 1 is fastest, 9 is smallest, default is 2. (int [=2]) + -z, --compression compression level for gzip output (1 ~ 9). 1 is fastest, 9 is smallest, default is 4. (int [=4]) --stdout output passing-filters reads to STDOUT. This option will result in interleaved FASTQ output for paired-end input. Disabled by defaut. --interleaved_in indicate that is an interleaved FASTQ which contains both read1 and read2. Disabled by defaut. --reads_to_process specify how many reads/pairs to be processed. Default 0 means process all reads. (int [=0]) @@ -302,7 +302,7 @@ options: -R, --report_title should be quoted with ' or ", default is "fastp report" (string [=fastp report]) # threading options - -w, --thread worker thread number, default is 3 (int [=3]) + -w, --thread worker thread number, default is 2 (int [=2]) # output splitting options -s, --split split output by limiting total split file number with this option (2~999), a sequential number prefix will be added to output name ( 0001.out.fq, 0002.out.fq...), disabled by default (int [=0])