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trees_report/README.md
@@ -30,8 +30,8 @@ work/conflict.csv and work/synthesis_tree_list.csv.
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* phylesystem-1
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* Install peyotl
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* Go to the reference-taxonomy repo and say `make compile bin/jython` (as of 2016-05-09,
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- the `amendments` branch of the reference-taxonomy repo is required, but
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- I expect this to get merged to master in the future)
+ the `cleanups-for-writeup` branch of the reference-taxonomy repo is required, but
+ I expect this to get merged to master in the near future)
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* Adjust SYNTH in the Makefile or put synthesis files in that location. It
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needs the files `output/labelled_supertree/labelled_supertree.tre` and
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`output/grafted_solution/grafted_solution.tre`
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