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cpe-23.09-rhel-8-7-ReleaseNotes.txt
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HPE Cray Programming Environment 23.09 Release Notes
====================================================
HPE Cray Compiling Environment (CCE) 16.0.1
===========================================
Release Date:
-------------
September 2023
Purpose:
--------
CCE 16.0.1 provides Fortran, C, and C++ compilers for
HPE Cray supercomputer and HPE Apollo 2000 Gen10Plus systems.
Key Changes and Support with CCE 16.0.1:
----------------------------------------
CCE 16.0.1:
-----------
CCE-16.0.1
- Bug fixes
- binutils updated to version 2.40
------------
CCE-16.0.0
- LLVM 16 base
- RHEL gcc-toolset-10 support/integration
- On RHEL, CCE uses headers and libraries from RHEL gcc-toolset-10 instead of
cray-gcc-10.3.0; other operating systems are unchanged
- OpenMP 5.0 full support, including the following new features:
- taskloop cancellation (Fortran)
- conditional lastprivate (Fortran)
- "if" clause on "simd" constructs (Fortran)
- iterators in "depend" clauses (Fortran)
- depend objects (Fortran)
- task reductions (Fortran)
- non-rectangular loop collapse (Fortran) - functional
- inclusive and exclusive scan operations (Fortran) - functional
- "declare mapper" (Fortran) - limited
- "loop" construct (C/C++) - limited
- Optimized OpenMP GPU parallelism mapping policy
- "omp teams" still maps to GPU coarse-grained parallelism (threadblocks or work groups)
- "omp parallel" now maps to GPU fine-grained parallelism (threads or work items)
- "omp simd" can still map to fine-grained parallelism (Fortran only)
- TCMalloc is removed in Fortran
- CCE no longer provides TCMalloc as an option replacement for the GLIBC
allocator. The related Fortran options (-htcmalloc/-hsystem_alloc) have been
removed.
- Tuned Support for AMD Genoa
- Grace SVE Support
- DWARF5 Enhancements
- Support for split DWARF
- Support for compressed DWARF
- Support for inline functions to depth 1
- Beta support for variables in OpenMP regions that are offloaded to AMD GPU
User and Application Impact:
----------------------------
CCE 16.0.1:
-----------
CCE-16.0.1
------------
CCE-16.0.0
On RHEL, CCE 16 uses headers and libraries from RHEL gcc-toolset-10. Prior
versions of CCE use headers and libraries from cray-gcc-10.3.0. Binaries built
with prior versions of CCE may need to be rebuilt. Users who are not using the
RHEL operating system are unaffected.
While the optional tcmalloc allocator provided a significant performance boost to some
multi-threaded applications, many third-party libraries and tools expect applications
to use the glibc allocator and do not work or work well with it so CCE is no longer
providing it. Users who still wish to use it will need to build it themselves.
Issues or Bugs Resolved:
------------------------
CCE 16.0.1:
-----------
CCE-16.0.1
CAST-30592 Memory Sanitizer
CAST-30921 (ELCAP-169) CCE 14.0.2 fails compiling Trillinos STK test with out of registers with no backtrace - Elevation of Case 5367010990
CAST-32040 Cray Compiler OpenACC - Hundreds of .acc.s and .acc.o files left after compiling
CAST-32937 crayftn error parsing type(double precision)
CAST-33123 ftn compile error for print in omp target loop if -R b
CAST-33380 FVCOM raises CCE internal compiler error
CAST-33381 ONETEP raises a CCE internal compiler error (segfault)
CAST-33445 UK Met Office climate benchmark crashes with segfault with CPE 23.05 (CCE 16.0)
CAST-33511 Logical transfers within an OMP region in cce16.0.0
------------
CCE-16.0.0
CAST-29703 CCE - internal compiler error
CAST-30549 LAMMPS CCE build failure when perftools or perftools-lite are loaded
CAST-30570 (CESM) fails to execute with CCE 14
CAST-30965 RFE: crayftn should respect LIBRARY_PATH
CAST-31156 Several problems with Cray CCE compiler version 14.0.3 and GFS weather code
CAST-31322 setonix - MultiGPU management with OpenMP multiple threads in a single task fails for Cray-clang compiler
CAST-31444 OpenACC unsupported call to variadic function
CAST-31567 Cray Fortran compiler error when compiling function with BIND
CAST-31568 Spurious CAUTION messages from Cray Fortran with O1 or higher optimization
CAST-31719 cce 15.0.0 ftn routine call in target offload loop gets unsupported call to variadic function - Elevation of Case 5369535423
CAST-31723 Function in target region linking error in CCE 15.0.0.3
CAST-31726 Crayftn bug: zero-sized array assignment
CAST-31809 Cray compiler optimization bug at -O2 and above
CAST-31813 ftn internal compiler error
CAST-31877 Compiler abort with simple OpenMP TARGET usage
CAST-31953 cce/15.0.0 internal compiler error
CAST-31998 Parameters and fixed values as optional arguments
CAST-32107 Cray Fortran Problem
CAST-32355 Build failure when using cce/15.0.0 and rocm/5.4.0
CAST-32360 Incorrect OpenMP Fortran compiler error
CAST-32415 CCE Assertion error when compiling rng.cc - Elevation of case 5371904261
CAST-32450 Pointer variables and class dummy variables fails with ACC: find_in_present_table failed for 'XXX (dope vector)'
CAST-32458 The DART application gives wrong answers when compiled with CCE
CAST-32485 Tioga - CCE 15.0.1 fails with Assertion `DwarfReg > = 0 && "Invalid dwarf register number"' failed compiling E3SM HIP source with -O0 -g - Elevation of Case 5372060962
CAST-32612 crayftn reports an error for recursive elemental procedures.
CAST-32040 Cray Compiler OpenACC - Hundreds of .acc.s and .acc.o files left after compiling
Product and OS Dependencies:
----------------------------
This CCE release is supported on
- HPE Cray supercomputer systems running CSM with COS 2.4.X or COS 2.5.X (SLES15 SP4)
- HPE Cray supercomputer systems running HPCM with SLES15 SP4
- HPE Cray supercomputer systems running HPCM with RHEL 8.6
- HPE Apollo 2000 Gen10Plus systems running RHEL 8.6
- AMD GPU offloading support requires at least ROCm 5.5.1
Notes and Limitations:
----------------------
Documentation:
--------------
- S-5212 Cray Compiling Environment Release Overview (16.0)
- S-3901 Cray Fortran Reference Manual
- S-2179 Cray C and C++ Quick Reference
- Basic man pages: crayftn(1), craycc(1), crayCC(1), intro_openmp()
- Please see https://clang.llvm.org/docs/UsersManual.html or use the -help command line option for
more information on using Clang
Modulefile:
-----------
The following will load the modules necessary to use CCE:
module load PrgEnv-cray
The following will switch to x.y.z version of CCE:
module swap cce cce/x.y.z
Installation instructions:
--------------------------
rpm -ivh cce-16.0.1-202308051334.68fa09927f4eb-1.el8.x86_64.rpm.x86_64.rpm
The following script will set CCE version 16.0.1 default:
/opt/cray/pe/admin-pe/set_default_files/set_default_cce_16.0.1
License:
--------
Except for the third party components and software licensed by HPE through
proprietary agreements, components, files or programs contained within this
package or product are Copyright -2023 Hewlett Packard Enterprise Development LP.
Attribution notices for open source licensed software for this
package are detailed in the file:
/opt/cray/pe/cce/16.0.1/ATTRIBUTIONS_16.0.txt
CrayPE 2.7.23
==============
Release Date:
--------------
April 2022
Purpose:
--------
Add support for mixed Programming Environments PrgEnv-cray-amd and
PrgEnv-gnu-amd, to support using the AMD ROCm C/C++ compiler with
the Cray CCE and GNU Fortran compilers, respectively.
Bugs fixed in this release:
---------------------------
- CAST-29420 - Cray Wrappers optimized for Zen2 and not Zen3
Dependencies:
---------------------------------------------
The CrayPE 2.7.23 release is dependent on .pc files in the following
software products:
ATP 1.6.3 or later
FFTW 3.3.0.4 or later
FFTW 2.1.5.6 or later
Global Arrays 5.1.0.2 or later
HDF5 1.8.11 or later
iobuf 2.0.5 or later
LibSci 12.1.01 or later
MPT 6.0.2 or later
NetCDF 4.3.0 or later
Parallel-NetCDF 1.3.1.1 or later
PMI 4.0.1 or later
PETSc 3.4.2.0 or later
Trilinos 11.4.1.0 or later
TPSL 1.3.04 or later
TotalView 8.12-totalview-support-1.1.5 or later
Documentation:
---------------
See manpages for cc, CC, ftn, intro_craype-api, intro_hugepages and pkg-config
See section 2.6 Using Targeting Modules of the Cray Programming Environment
User's Guide (S-2529-116)
See http://www.freedesktop.org/wiki/Software/pkg-config for a pkg-config
introduction.
Installation instructions:
--------------------------
rpm -ivh craype-2.7.23-202308030531.56cb54942b4bd-0.el8.x86_64.rpm
To make this the default version, execute:
/opt/cray/pe/admin-pe/set_default_files/set_default_craype_2.7.23
Product description:
--------------------
CrayPE contains drivers, cc, CC, and ftn to compile for the CCE, PGI, GNU,
and Intel Programming Environments.
The craype-* targeting modules are also provided in this product.
Certain components, files or programs contained within this package or product
are Copyright 2013-2022 Hewlett Packard Enterprise Development LP.
Cray PE DL Plugin with Resiliency Support 22.06.1.2:
Release Date:
-------------
June 2022
Purpose:
--------
The following changes have been made since Cray PE DL Plugin 21.04.1:
o Updated DL framework support
o Introduction of resiliency support
o BFloat16 data type support
Supported Configurations:
-------------------------
Shasta/EX: CPU and AMD GPU support with PrgEnv-gnu
The following Deep Learning frameworks and versions are supported:
* TensorFlow v2.6
* PyTorch v1.10.2
Documentation:
--------------
For more information see the intro_dl_plugin man pages.
For info regarding use of the new resiliency feature, see the examples
and README.md in ${CRAYPE_ML_PLUGIN_BASEDIR}/examples/resiliency
Sample Installation instructions:
---------------------------------
Note: Package must be installed or sym linked in the default /opt/cray/pe path.,
ie: use of the --prefix flag for rpm is not supported.
rpm -ivh craype-dl-plugin-ftr-22.06.1.2*.x86_64.rpm
The "*" in the install command represents date and hash specific information.
Modulefile:
-----------
Shasta/EX:
module load craype-dl-plugin-ftr/22.06.1.2
Certain components, files or programs contained within this package or
product are Copyright 2017-2022 Hewlett Packard Enterprise Development LP.
Cray PE DL Plugin 21.02.1.3:
Release Date:
-------------
February 2021
Purpose:
--------
The following changes have been made since Cray PE DL Plugin 20.10.1:
o Bug fixes for CUDA 11 support and pip install of include source dist
o Initial CUDA 11.1 support
o Updated DL framework support
Supported Configurations:
-------------------------
CS: OpenMPI 4.0.2 and cray-mvapich 2.3.2 or newer with CPU and GPU support
XC CLE 7: CPU and GPU support
Shasta: CPU-only support
Apollo: CPU-only support
The following Deep Learning frameworks and versions are supported:
* TensorFlow v2.4
* PyTorch v1.7.1
Documentation:
--------------
For more information see the intro_dl_plugin man pages.
Known Issues:
-------------
* Using Tensorflow 1.14 binaries distributed by Google and Intel require portions of the DL
Plugin to be compiled with gcc 4.8. If using the included source distribution of the
DL Plugin to install the Python packagesinto a given Python installation, gcc 4.8
will need to be used to install said packages, assuming Google and Intel distributed
Tensorflow 1.14 binaries are used. For TensorFlow 1.15 and greater, use of gcc 7.x
is required instead.
Sample Installation instructions:
rpm -ivh craype-dl-plugin-py3-21.02.1.3*.x86_64.rpm
The "*" in the install command represents date and hash specific information.
Modulefile:
-----------
XC/Shasta:
module load craype-dl-plugin-py3/21.02.1.3
CS:
module load craype-dl-plugin-py3/openmpi/21.02.1.3
module load craype-dl-plugin-py3/mvapich/21.02.1.3
Certain components, files or programs contained within this package or
product are Copyright 2017-2021 Hewlett Packard Enterprise Development LP.
Cray PE DL Plugin 22.09.1:
Release Date:
-------------
September 2022
Purpose:
--------
The following changes have been made since Cray PE DL Plugin 22.08.1:
o Keras callbacks bug fixes
Supported Configurations:
-------------------------
CS: OpenMPI 4.0.2 and cray-mvapich 2.3.2 or newer with CPU and GPU support
XC: CLE 7 CPU and GPU support
EX: CPU and GPU support
Apollo: CPU-only support
The following Deep Learning frameworks and versions are supported:
* TensorFlow v2.6
* PyTorch v1.10
Documentation:
--------------
For more information see the intro_dl_plugin man pages.
Known Issues:
-------------
* Using Tensorflow 1.14 binaries distributed by Google and Intel require portions of the DL
Plugin to be compiled with gcc 4.8. If using the included source distribution of the
DL Plugin to install the Python packagesinto a given Python installation, gcc 4.8
will need to be used to install said packages, assuming Google and Intel distributed
Tensorflow 1.14 binaries are used. For TensorFlow 1.15 and greater, use of gcc 7.x
is required instead.
Sample Installation instructions:
rpm -ivh craype-dl-plugin-py3-22.09.1*.x86_64.rpm
The "*" in the install command represents date and hash specific information.
Modulefile:
-----------
XC/EX:
module load craype-dl-plugin-py3/22.09.1
CS:
module load craype-dl-plugin-py3/openmpi/21.04.1
module load craype-dl-plugin-py3/mvapich/21.04.1
Certain components, files or programs contained within this package or
product are Copyright 2017-2021 Hewlett Packard Enterprise Development LP.
Cray PE DL Plugin 22.12.1:
Release Date:
-------------
December 2022
Purpose:
--------
The following changes have been made since Cray PE DL Plugin 22.09.1:
o TF v2.9 Support
Supported Configurations:
-------------------------
CS: OpenMPI 4.0.2 and cray-mvapich 2.3.2 or newer with CPU and GPU support
XC: CLE 7 CPU and GPU support
EX: CPU and GPU support
Apollo: RHEL8.6 CPU and GPU support
The following Deep Learning frameworks and versions are supported:
* TensorFlow v2.9
* PyTorch v1.10
Documentation:
--------------
For more information see the intro_dl_plugin man pages.
Known Issues:
-------------
* Using Tensorflow 1.14 binaries distributed by Google and Intel require portions of the DL
Plugin to be compiled with gcc 4.8. If using the included source distribution of the
DL Plugin to install the Python packagesinto a given Python installation, gcc 4.8
will need to be used to install said packages, assuming Google and Intel distributed
Tensorflow 1.14 binaries are used. For TensorFlow 1.15 and greater, use of gcc 7.x
is required instead.
Sample Installation instructions:
rpm -ivh craype-dl-plugin-py3-22.12.1*.x86_64.rpm
The "*" in the install command represents date and hash specific information.
Modulefile:
-----------
XC/EX:
module load craype-dl-plugin-py3/22.12.1
CS:
module load craype-dl-plugin-py3/openmpi/21.04.1
module load craype-dl-plugin-py3/mvapich/21.04.1
Certain components, files or programs contained within this package or
product are Copyright 2017-2021 Hewlett Packard Enterprise Development LP.
CrayPE Targets 1.11.0
================================================================================
Release Date:
--------------------------------------------------------------------------------
May, 2023
Purpose:
--------------------------------------------------------------------------------
Adds pre-release modules craype-accel-amd-gfx940 and craype-accel-intel-max
Bugs fixed in this release:
--------------------------------------------------------------------------------
None
Dependencies:
--------------------------------------------------------------------------------
The CrayPE Targets 1.11.0 release is dependent on the following
software products:
CrayPE
set_default_3
lmod_scripts
Documentation:
--------------------------------------------------------------------------------
See manpages for cc, CC, ftn, intro_craype-api and pkg-config
See section 2.6 Using Targeting Modules of the Cray Programming Environment
User's Guide (S-2529-116)
See http://www.freedesktop.org/wiki/Software/pkg-config for a pkg-config
introduction.
Installation instructions:
--------------------------------------------------------------------------------
rpm -Uvh craype-targets-ex-hpcm-1.11.0-202304121936.e90d71ebf65e5-1.ex.hpcm.noarch.rpm
To make this the default version, execute:
/opt/cray/pe/admin-pe/set_default_files/set_default_craype-targets_1.11.0-tcl
/opt/cray/pe/admin-pe/set_default_files/set_default_craype-targets_1.11.0-lua
Product description:
--------------------------------------------------------------------------------
CrayPE Targets contains the modules for CrayPE targets.
TCL Modules - craype-accel-host craype-accel-amd-gfx90a craype-accel-amd-gfx908 craype-accel-amd-gfx940 craype-accel-intel-max craype-accel-nvidia70 craype-accel-nvidia80 craype-hugepages2M craype-hugepages4M craype-hugepages8M craype-hugepages16M craype-hugepages32M craype-hugepages64M craype-hugepages128M craype-hugepages256M craype-hugepages512M craype-hugepages1G craype-hugepages2G craype-arm-grace craype-x86-milan craype-x86-milan-x craype-x86-rome craype-x86-spr craype-x86-spr-hbm craype-x86-trento craype-x86-genoa craype-network-none craype-network-ofi craype-network-ucx
Lmod Modules - craype-accel-host craype-accel-amd-gfx90a craype-accel-amd-gfx908 craype-accel-amd-gfx940 craype-accel-intel-max craype-accel-nvidia70 craype-accel-nvidia80 craype-hugepages2M craype-hugepages4M craype-hugepages8M craype-hugepages16M craype-hugepages32M craype-hugepages64M craype-hugepages128M craype-hugepages256M craype-hugepages512M craype-hugepages1G craype-hugepages2G craype-arm-grace craype-x86-milan craype-x86-milan-x craype-x86-rome craype-x86-spr craype-x86-spr-hbm craype-x86-trento craype-x86-genoa craype-network-none craype-network-ofi craype-network-ucx
Copyright 2013-2022 Hewlett Packard Enterprise Development LP
Craypkg-gen 1.3.30
==============
Release date
------------
August 2023
Purpose
-------
Bug fix release.
Bugs fixed in this release
--------------------------
- Implement a setuptools build and install for craypkg-gen
- Remove rpmbuild functionality of craypkg-gen
- Switch front end cli from deprecated optparse to ArgumentParser
- Fix PREFIX in craypkg-gen lua modulefile
- Implement better methods for discovering version strings
- Add better support for generating GNU compiler modulefiles
- Add better support for determining compat versions for lmod hierarchy
Dependencies
------------
The craypkg-gen 1.3.30 release is supported on the following HPE
Cray systems:
- Cray EX systems SLE 15.0 or later and RHEL 8.0 or later.
Driver support for integrating Third Party C, C++, and Fortran libraries
through .pc files using pkg-config is used in CrayPE 2.x and later.
Limitation
----------
- Library dependencies for static libraries are not added to the .pc files
for keywords Requires.private and Libs.private. A warning is issued by
the craypkg-gen tool to advise users to add this information to the
libraries .pc files.
- RPM limits packages to 4GB
Documentation
-------------
Man pages for craypkg-gen are found by executing `module load craypkg-gen`
and then `man craypkg-gen`. See
http://www.freedesktop.org/wiki/Software/pkg-config for a pkg-config
introduction.
Examples for creating modulefiles for Intel, PGI and Python are included in
the craypkg-gen ‘doc’ directory:
/opt/cray/craypkg-gen/1.3.30/doc/intel_example.txt
/opt/cray/craypkg-gen/1.3.30/doc/pgi_example.txt
/opt/cray/craypkg-gen/1.3.30/doc/python_example.txt
Example:
- As an example, the Intel 16.0.3.210 compiler was recently released.
After installing the compiler the administrator creates a modulefile for
this release by executing the following commands:
# module load craypkg-gen
# craypkg-gen -m /opt/intel/compilers_and_libraries_2016.3.210
This version of the Intel compiler is made default by executing the
command:
# /opt/admin-pe/set_default_craypkg/set_default_intel_16.0.3.210
Installation instructions
-------------------------
rpm -ivh craypkg-gen-1.3.30-1.3.30^18^g9d02289-1.el8.noarch.rpm
To change the product version to default after installation:
/opt/cray/pe/admin-pe/set_default_files/set_default_craypkg-gen_1.3.30
Product description
-------------------
The craypkg-gen 1.3.30 utility provides the system administrator
a tool to integrate third party software with the Cray software stack.
Craypkg-gen assists with integration by creating .pc files for C, C++, and
Fortran libraries, pkg-config enabled modulefiles and RPMs.
The workflow for using craypkg-gen is
1) Build the open source software
2) Create .pc files for libraries
3) Create pkg-config enabled modulefiles
4) Customize pkg-config and modulefiles if needed
Certain components, files or programs contained within this package or product
are Copyright 2013-2023 Hewlett Packard Enterprise Development LP.
Cray DSMML 0.2.2:
==========================
Release Date:
-------------
October, 2021
Product Information:
--------------------
DSMML is a stand-alone memory management library for maintaining distributed
shared symmetric memory heaps for top level PGAS languages and libraries like
Coarray Fortran, UPC, and OpenSHMEM. DSMML allows user libraries to create
multiple symmetric heaps and share information with other libraries. Through
DSMML, we could extract interoperability between PGAS programming models.
Announcements, release informations, supported environments, and backward
compatibility informations about this product can be viewed in the following
location: https://pe-cray.github.io/cray-dsmml/
Purpose:
--------
Cray DSMML 0.2.2 supports the following features:
- Create symmetric heap segments for being used by PGAS languages and
libraries
- Allows options to allocate, deallocate memory buffers from previously
created symmetric heap segments
- Enables sharing information about the symmetric heap segments between
different programming models
- Added support for shared symmetric heap (SSHEAP) that can be used to
provide enhanced SMP data transport in user-libraries like SHMEM, CAF, UPC
The following features are fixed in Cray DSMML 0.2.2 when compared
to Cray DSMML 0.2.1:
- Internal bug fixes involving hugepage cleanups
Refer intro_dsmml(3) manpage for more information on the supported features
and syntax for different routines
Product and OS Dependencies:
----------------------------
The Cray DSMML 0.2.2 release is supported on the following
Cray systems:
* HPE Cray EX systems with CLE
Product and OS Dependencies by network type:
--------------------------------------------------+
| Shasta |
----------------------------+---------------------+
craype | >= 2.7.3 |
----------------------------+---------------------+
One or more compilers:
* AOCC 2.2 or later
* CCE 9.1 or later
* GNU 9.1 or later
* Intel 19.0 or later
* Nvidia 20.7 or later
Documentation:
--------------
Use the Cray DSMML man pages for more information on the library
functions and use intro_dsmml(3) man page for general information.
Use https://pe-cray.github.io/whitepapers/ for access to different
Cray DSMML specific whitepapers
Announcements, release informations, supported environments, and backward
compatibility informations about this product can be viewed in the following
location: https://pe-cray.github.io/cray-dsmml/
Modulefile:
-----------
module load cray-dsmml/0.2.2
Certain components, files or programs contained within this package or
product have the following Copyright:
Copyright 2018-2021 Hewlett Packard Enterprise Development LP.
FFTW 3.3.10.5
============
Release Date:
-------------
September 2023
Purpose:
--------
This Cray FFTW 3.3.10.5 release is supported on Cray EX (formerly
Shasta) systems. FFTW is supported on the host CPU but not on the
accelerator of Cray systems.
The Cray FFTW 3.3.10.5 release provides the following:
- Compiler and dependency updates
See the Product and OS Dependencies section for details.
Product and OS Dependencies:
----------------------------
The Cray FFTW 3.3.10.5 release is supported on the following Cray systems:
Cray EX Systems with SLES 15 SP3 or later based OS
The FFTW 3.3.10.5 release requires the following software products:
craype 2.7.5 or later
MPT 8.0 or later
One or more of the following major compiler versions:
CCE 15, 16
GCC 10, 11, 12
AOCC 3, 4
Intel 2021 or later
Notes and Limitations:
----------------------
Starting with cray-fftw/3.3.6.1 the fftw module has been renamed from fftw
to cray-fftw.
Documentation:
--------------
http://www.fftw.org/index.html#documentation
See the intro_fftw3 manual page for additional information.
Modulefile:
-----------
module load cray-fftw
Installation
------------
To install the rpm, execute:
rpm -ivh cray-fftw-3.3.10.5-202308072035.1f10cbf899fcf-1.shasta.el8.x86_64.rpm
To make this the default version, execute:
/opt/cray/pe/admin-pe/set_default_files/set_default_fftw_3.3.10.5
Certain components, files or programs contained within this package or
product are Copyright 2011-2023 Hewlett Packard Enterprise Development LP
HDF5 1.12.2.5
=============
Release Date:
-------------
May 2023
Purpose:
--------
This HDF5 release contains the following:
* Support for RHEL gcc-toolset-10
Product and OS Dependencies:
----------------------------
The HDF5 release is supported on the following systems:
* Cray systems with RHEL 8
The HDF5 1.12.2.5 release requires the following software products:
Cray MPT 8.0 or later, or cray-mvapich 2.3.2 or later for A64FX-based systems
One or more compilers:
CCE 15.0 or later
GCC RHEL Toolset 10.3.1-1
Intel 2022.2.0 or later
AOCC 3.2 or later
AMD 5.0 or later
Nvidia 22.0 or later
Notes and Limitations:
----------------------
Users are encouraged to use the Cray compiler scripts (cc, ftn, CC)
to include the HDF5 header files and link in the HDF5 libraries,
rather than the HDF5 compiler scripts (h5cc, h5fc, h5c++) included
in the release.
Documentation:
--------------
http://www.hdfgroup.org/HDF5/doc/index.html
Modulefile:
-----------
module load cray-hdf5
OR
module load cray-hdf5-parallel
Product description:
--------------------
HDF5 is a data model, library, and file format for storing and managing data.
It supports an unlimited variety of datatypes, and is designed for flexible
and efficient I/O and for high volume and complex data. HDF5 is portable and
is extensible, allowing applications to evolve in their use of HDF5. The HDF5
Technology suite includes tools and applications for managing, manipulating,
viewing, and analyzing data in the HDF5 format.
Installation:
-------------
Installation instructions for CLE 7.0 and later:
================================================
rpm -ivh cray-hdf5-1.12.2.5-*202304192234.3d35b3dfde0df-3.el8.x86_64.rpm
The "*" in the install command represents compiler version combinations.
To make this the default version, execute:
/opt/cray/pe/admin-pe/set_default_files/set_default_hdf5_1.12.2.5
Certain components, files or programs contained within this package or product
are Copyright 2019-2023 Hewlett Packard Enterprise Development LP.
Cray LibSci 23.09.1.1
=====================
Release Date:
-------------
September 2023
Purpose:
--------
Cray LibSci 23.09.1.1 provides scientific libraries for Cray
HPC systems. Cray LibSci is supported on the host CPU but
not on the accelerator of these systems.
The Cray LibSci 23.09.1.1 release provides the following:
* misc packaging updates
Cray LibSci 23.09.1.1 includes the following versions of publicly
available libraries:
* LAPACK 3.10.1 - For further information, see
http://www.netlib.org/lapack
* ScaLAPACK 2.2.0 - (Scalable LAPACK) For further information, see
http://www.netlib.org/scalapack.
* QDWH 2.0.0 KSVD 1.0.0 - Polar decomposition and SVD packages, see
https://github.com/ecrc/qdwh
https://github.com/ecrc/ksvd
Product and OS Dependencies:
----------------------------
The Cray LibSci 23.09.1.1 release requires the following:
SLE 15 or RHEL 8
craype/2.7.3 or later
cray-mpich/8.1.0 or later
One or more of the following compiler major versions:
CCE 15.x, 16.x
GCC 10.x, 11.x, 12.x (SLES)
gcc-toolset-10.3.1-1 (RHEL)
AOCC 3.x, 4.x
AMD ROCm 5.x
Intel 2023.x
Nvidia 22.x
Notes and Limitations:
----------------------
OMP threaded versions:
The CrayPE 2.1.2 and later releases add support for link line generation
for the multi-threaded versions of the libsci library based on the OpenMP
flags the user specifies for each compiler:
* CCE by default links to the OpenMP LibSci library. CrayPE will link in
the serial version of LibSci when the CCE flag -hnoomp is used.
* GNU by default links serial LibSci library. CrayPE will link in the
OpenMP version of LibSci when the GNU flag -fopenmp is used.
* INTEL by default links serial LibSci library. CrayPE will link in the
OpenMP version of LibSci when the INTEL flag -qopenmp is used.
Stack size limit:
The 'ulimit -s unlimited' system stack size setting is required for
cray-libsci on all supported Cray platforms. This is typically set as a
system default by admin but may otherwise need to be set at runtime.
QDWH and KSVD:
These packages are currently included for CCE, GNU, and Intel compilers.
Non-default dynamic linking:
When using a non-default version of cray-libsci with dynamic linking
users should set at runtime and at linktime after loading the desired
cray-libsci module--or set the equivalent for their linux shell:
export LD_LIBRARY_PATH=$CRAY_LD_LIBRARY_PATH:$LD_LIBRARY_PATH
Documentation:
--------------
See the intro_libsci man page for additional information.
See the csmlversion man page for information to display version information
on the currently loaded scientific libraries.
Modulefile:
-----------
module load cray-libsci
Installation instructions:
--------------------------
LibSci is now packaged into separate compiler specific RPMs to allow
rpmbuild to correctly include compiler dependencies.
License:
--------
Except for the third party components and software licensed by HPE
through proprietary agreements, components, files or programs
contained within this package or product are Copyright 2001-2023
Hewlett Packard Enterprise Development LP.
Attribution notices for open source licensed software contained in this
package are detailed in the file:
/opt/cray/libsci/23.09.1.1/ATTRIBUTIONS_libsci23.09.1.1.txt
LibSci_ACC 23.09.2.1
====================
Release Date:
-------------
September 2023
Purpose and Misc:
-----------------
The Cray LibSci_ACC 23.09.2.1 release provides accelerated versions of
scientific libraries for Cray systems with AMD MI100 or MI200 targets.
Product and OS Dependencies:
----------------------------
Cray LibSci_ACC 23.09.2.1 requires the following platform:
HPE Cray EX system with AMD MI100 or MI200 support
Cray LibSci_ACC 23.09.2.1 also requires:
For SLES rpms:
CCE 14.0 or later
AMD ROCm 5.0 or later
Cray MPICH 8.1.15 or later
Cray LIBSCI 22.08 or later
For RHEL rpms:
CCE 16.0 or later
AMD ROCm 5.0 or later
Cray MPICH 8.1.26 or later
Cray LIBSCI 23.05 or later
Notes and Limitations:
----------------------
Cray LibSci_ACC 23.09.2.1 supports AMD MI100 and MI200 targets.
LAPACK workspace calculations from other implementations or hard-coded
values may not be compatible with libsci_acc. Workspaces reported from
a query to the corresponding libsci_acc function should be used.
The current supported usecase is a one-rank to one-gpu mapping for apps.
Performance improvements can be achieved in programs calling libsci_acc
subroutines by using pinned memory. See the intro_libsci_acc man page for
details.
Use of the aprun option "-cc none" or the srun option "--cpu_bind=none"
to disable core affinity is strongly suggested to maintain performance.
When using non-default cray-libsci_acc versions users should set equivalent
at runtime and linktime after loading the desired cray-libsci_acc module:
export LD_LIBRARY_PATH=$CRAY_LD_LIBRARY_PATH:$LD_LIBRARY_PATH
Documentation:
--------------------------------
See the intro_libsci_acc man page for additional information.
Modulefile:
-----------
module load cray-libsci_acc