diff --git a/README.md b/README.md index 9e67a257..7159b5c0 100644 --- a/README.md +++ b/README.md @@ -5,7 +5,7 @@ PX Submission Tool is a desktop application to submit the data to proteomeXchang # Quick Download -[](https://github.com/PRIDE-Archive/px-submission-tool/releases/download/2.4.17/px-submission-tool-2.4.17.zip) +[](https://github.com/PRIDE-Archive/px-submission-tool/releases/download/2.4.18/px-submission-tool-2.4.18.zip) Please unzip and run `px-submission-tool-.jar` file! diff --git a/pom.xml b/pom.xml index 702f39c3..e0e8ba45 100644 --- a/pom.xml +++ b/pom.xml @@ -4,7 +4,7 @@ uk.ac.ebi.pride.px px-submission-tool jar - 2.4.17 + 2.4.18 px-submission-tool https://github.com/proteomexchange/px-submission-tool diff --git a/src/main/java/uk/ac/ebi/pride/gui/task/FileScanAndValidationTask.java b/src/main/java/uk/ac/ebi/pride/gui/task/FileScanAndValidationTask.java index 46eca419..f9765d5a 100755 --- a/src/main/java/uk/ac/ebi/pride/gui/task/FileScanAndValidationTask.java +++ b/src/main/java/uk/ac/ebi/pride/gui/task/FileScanAndValidationTask.java @@ -341,17 +341,17 @@ private Map> checkMzTabFileReferences(List mzTab errorEntry = mzTabFile.getMzTabDocument().getMetaData().getMsRunEntry(msRunIndex).getLocation().toString(); } else { // The file is in the list of files part of the current submission process - // Check that the referenced file is a Peak List file - if (dataFiles.get(referencedFile).getFileType() != ProjectFileType.PEAK) { + // Check that the referenced file is a Raw file + if (dataFiles.get(referencedFile.toLowerCase()).getFileType() != ProjectFileType.RAW) { // Flag the error errorFlagged = true; // Log the error errorLogMsg = "mzTab file '" + mzTabFile.getFilePath() - + "' references NON-Peak List file '" + + "' references NON-RAW file '" + referencedFile + "', which is NOT ALLOWED"; // Report the error - errorEntry = "NON-Peak List referenced file '" + errorEntry = "NON-RAW file '" + referencedFile + "', is NOT ALLOWED"; }