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<!DOCTYPE HTML>
<html lang="" >
<head>
<title>Python · GitBook</title>
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Introduction
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<a href="PsicquicSpecification.html">
Specification
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<li class="chapter " data-level="1.1.1.1" data-path="PsicquicSpec_1_4_Soap.html">
<a href="PsicquicSpec_1_4_Soap.html">
SOAP
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<li class="chapter " data-level="1.1.1.2" data-path="PsicquicSpec_1_4_Rest.html">
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REST
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Registry
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Registry Service Tags
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Java client
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MIQL Reference 2.5
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MIQL Extension 2.7
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MIQL Extension 2.8
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Clients
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R Bioconductor package
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Java
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Perl
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Python
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Cytoscape
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Formats
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PSI-MI TAB
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MITAB 2.5
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MITAB 2.6
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MITAB 2.7
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MITAB 2.8
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PSI-MI XML
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PSI-MI XML 2.5
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PSI-MI XML 3.0
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Java Examples
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Service providers
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How to install PSICQUIC Solr (recommened)
</a>
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Single jetty server
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Using a solr server independent from the PSICQUIC server
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How to install PSICQUIC using LUCENE
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Using LUCENE
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Data Distribution Best Practices
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Data Enricher
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FAQ
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Who uses PSICQUIC?
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How to release the project
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<h1 id="python-examples">Python examples</h1>
<p>All the Python examples in this page use the REST access as it is straight-forward to use for scripting languages.</p>
<h2 id="accessing-the-registry">Accessing the registry</h2>
<h3 id="python-27-examples">Python 2.7 examples</h3>
<ul>
<li><a href="https://github.com/PSICQUIC/psicquic-registry-client/blob/master/src/example/python/read-registry.py" target="_blank">List all the Services and its base URL</a>.</li>
<li><a href="https://github.com/PSICQUIC/psicquic-registry-client/blob/master/src/example/python/read-registry-more-info.py" target="_blank">List all the Services showing more details about the service</a>.</li>
</ul>
<h3 id="python-3-examples">Python 3 examples</h3>
<ul>
<li><a href="https://github.com/PSICQUIC/psicquic-registry-client/blob/master/src/example/python/read-registry-python3.py" target="_blank">List all the Services and its base URL</a>.</li>
<li><a href="https://github.com/PSICQUIC/psicquic-registry-client/blob/master/src/example/python/read-registry-more-info-python3.py" target="_blank">List all the Services showing more details about the service</a>.</li>
</ul>
<h2 id="querying-psicquic-services">Querying PSICQUIC services</h2>
<p>The following examples can be used to access PSICQUIC services.</p>
<h3 id="python-27-examples">Python 2.7 examples</h3>
<ul>
<li><a href="https://github.com/PSICQUIC/psicquic-solr-ws/blob/master/src/example/python/read-single-psicquic.py" target="_blank">Query one service</a>.</li>
<li><a href="https://github.com/PSICQUIC/psicquic-solr-ws/blob/master/src/example/python/read-all-psicquic.py" target="_blank">Query all the services</a>: It queries the registry to get all the services and then executes a query for each one of them.</li>
</ul>
<h3 id="python-3-examples">Python 3 examples</h3>
<ul>
<li><a href="https://github.com/PSICQUIC/psicquic-solr-ws/blob/master/src/example/python/read-single-psicquic-python3.py" target="_blank">Query one service</a>.</li>
<li><a href="https://github.com/PSICQUIC/psicquic-solr-ws/blob/master/src/example/python/read-all-psicquic-python3.py" target="_blank">Query all the services</a>: It queries the registry to get all the services and then executes a query for each one of them.</li>
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