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NEWS.md

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PhosR 1.9.1

  • Bug fixes

PhosR 1.5.2

  • Bug fix in plotQC
  • Minor improvements in documentations of functions
  • Included motif list for other species in KinaseSubstrateScore function
  • Added plotting parameters in kinaseSubstrateHeatmap function

PhosR 1.5.1

  • Development version

PhosR 1.4.1

  • Bug fix in PCA plot variance

PhosR 1.4.0

  • BioC release 3.14

PhosR 1.3.1

  • Bug fixes in the vignette

PhosR 1.3.0

  • Bioconductor development version

PhosR 1.2.1

  • Included Cell Report citation
  • rainbow colour palette is used for plotQC function

PhosR 1.2.0

  • Bioconductor release version

PhosR 1.1.9

  • Fixes in documentation, examples and styles to meet BioC requirements

PhosR 1.1.8

  • Fixes in documentation and examples to meet BioC requirements

PhosR 1.1.7

  • Fixed getSPS to expect residue information.

PhosR 1.1.6

  • Included warning signs to creating PhosphoExperiment object without attributes.

PhosR 1.1.5

  • Fixed the warning message generated in plotQC for dendrograms. (Warning message: Vectorized input to element_text() is not officially supported.).

PhosR 1.1.4

  • Fixed the parameter of plotQC from cols to grps

PhosR 1.1.3

  • Fixed a bug in ptImpute function
  • Edited medianScaling documentation to be more specific

PhosR 0.1.5

  • Significant updates and addition to the documentation
  • Major changes to code writing style to comply with BioC
  • Updated TC example data