diff --git a/workflow/rules/vaf.smk b/workflow/rules/vaf.smk index 53edb30..9883db6 100644 --- a/workflow/rules/vaf.smk +++ b/workflow/rules/vaf.smk @@ -142,7 +142,7 @@ rule variants_effect: shell: """ snpeff {params.ref_name} {input.vcf} > {output.ann_vcf} - rm snpEff_genes.txt snpEff_summary.html + """ rule vcf_to_tsv: