diff --git a/template.qmd b/template.qmd index 711972c..55a8dc4 100644 --- a/template.qmd +++ b/template.qmd @@ -226,10 +226,10 @@ read mappings. ![Neighbor-joining tree based on the pairwise allele frequency-weighted distances.](`r params$tree`){#fig-tree} -To estimate the substitution rate, root-to-tip distances measured on the previous +To estimate the evolutionary rate, root-to-tip distances measured on the previous tree (@fig-tree) have been correlated with time, obtaining a $R^2$ of -$`r correlation`$ and a p-value of $`r p_value_lm`$. The estimated substitution -rate is $`r sub_rate`$ substitutions per year (@fig-tempest). +$`r correlation`$ and a p-value of $`r p_value_lm`$. The estimated evolutionary +rate is $`r sub_rate`$ number of changes per year (@fig-tempest). ![Scatterplot depicting the relationship between root-to-tip distances and the number of days passed since the first sample. The red