From 51d58745d57abc8627bbeac0b1aff3f24b2d73bf Mon Sep 17 00:00:00 2001 From: Guillaume Poirier-Morency Date: Fri, 14 Jun 2024 14:42:59 -0700 Subject: [PATCH] Remove -f flag when calling fillBatchInfo --- rnaseq_pipeline/tasks.py | 3 --- 1 file changed, 3 deletions(-) diff --git a/rnaseq_pipeline/tasks.py b/rnaseq_pipeline/tasks.py index 91f961a..d5125ce 100755 --- a/rnaseq_pipeline/tasks.py +++ b/rnaseq_pipeline/tasks.py @@ -406,9 +406,6 @@ def requires(self): else: raise NotImplementedError('Extracting batch information from {} is not supported.'.format(self.external_database)) - def subcommand_args(self): - return ['-f', self.input().path] - def output(self): return GemmaDatasetHasBatch(self.experiment_id)