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stream_watcher.py
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# Copyright (C) 2022-Present Indoc Systems
#
# Licensed under the GNU AFFERO GENERAL PUBLIC LICENSE,
# Version 3.0 (the "License") available at https://www.gnu.org/licenses/agpl-3.0.en.html.
# You may not use this file except in compliance with the License.
from enum import Enum
from enum import unique
from typing import Generator
from kubernetes import watch
from kubernetes.client import BatchV1Api
from kubernetes.client import V1Job
from pydantic import BaseModel
from pydantic import Extra
from requests import Session
from config import Settings
from logger import logger
class PipelineJobEvent(Enum):
ADDED = (0,)
MODIFIED = (1,)
DELETED = 2
class PipelineName(Enum):
dicom_edit = (0,)
data_transfer = (1,)
data_delete = 200
DATA_TRANSFER_FOLDER = 'data_transfer_folder'
DATA_DELETE_FOLDER = 'data_delete_folder'
class ActionState(Enum):
INIT = (0,)
PRE_UPLOADED = (1,)
CHUNK_UPLOADED = (2,)
FINALIZED = (3,)
SUCCEED = (4,)
TERMINATED = 5
RUNNING = 6
ZIPPING = 7
READY_FOR_DOWNLOADING = 8
@unique
class ItemZoneType(int, Enum):
GREENROOM = 0
CORE = 1
@unique
class ItemType(str, Enum):
NAME_FOLDER = 'name_folder'
FOLDER = 'folder'
FILE = 'file'
class Item(BaseModel):
id: str
zone: ItemZoneType
type: ItemType
class Config:
extra = Extra.allow
class FailHandler:
def __init__(self, settings: Settings, annotations, what) -> None:
self.settings = settings
self.metadata_service_endpoint_v1 = f'{settings.METADATA_SERVICE}/v1'
self.data_ops_service_endpoint_v1 = f'{settings.DATAOPS_SERVICE}/v1'
self.annotations = annotations
self.what = what
self.client = Session()
def update_file_operation_status(self, session_id, job_id, zone, status, payload=None) -> None:
if payload is None:
payload = {}
payload = {
'session_id': session_id,
'job_id': job_id,
'status': status,
'progress': '100',
'add_payload': {
'zone': zone,
**payload,
},
}
response = self.client.put(f'{self.data_ops_service_endpoint_v1}/tasks', json=payload)
logger.info(f'Received "{response.status_code}" status code after task update.')
def get_resource_by_id(self, id_: str) -> Item:
response = self.client.get(f'{self.metadata_service_endpoint_v1}/item/{id_}')
if response.status_code != 200:
message = f'[Fatal] Source resource not found for: {id_}'
logger.error(message)
raise Exception(message)
return Item.parse_obj(response.json()['result'])
def handle(self) -> None:
logger.debug(f'{self.what} annotations: {self.annotations}')
source_id = self.annotations.get('event_payload_source_geid', None)
if not source_id:
logger.error(f'[Fatal] None event_payload_source_geid: {self.annotations}')
raise Exception('[Fatal] None event_payload_source_geid')
session_id = self.annotations.get('event_payload_session_id', 'default_session')
job_id = self.annotations.get('event_payload_job_id', 'default_job')
resource = self.get_resource_by_id(source_id)
logger.info(f'Received resource type: {resource.type}')
zone = self.get_zone(resource)
self.update_file_operation_status(
session_id, job_id, zone, ActionState.TERMINATED.name, payload={'message': 'pipeline failed.'}
)
def get_zone(self, item: Item) -> str:
raise NotImplementedError
class DeleteFailed(FailHandler):
def get_zone(self, item: Item) -> str:
if item.zone == ItemZoneType.GREENROOM:
return self.settings.GREEN_ZONE_LABEL.lower()
return self.settings.CORE_ZONE_LABEL.lower()
class TransferFailed(FailHandler):
def get_zone(self, item: Item) -> str:
return self.settings.CORE_ZONE_LABEL.lower()
class StreamWatcher:
def __init__(self, batch_api: BatchV1Api, settings: Settings) -> None:
self.name = 'k8s_job_watch'
self.watcher = watch.Watch()
self.batch_api = batch_api
self.settings = settings
def job_filter(self, job: V1Job) -> bool:
active_pods = job.status.active
return active_pods == 0 or active_pods is None
def watch_callback(self, job: V1Job) -> None: # noqa: C901
try:
job_name = job.metadata.name
pipeline = job.metadata.labels['pipeline']
if self.job_filter(job):
logger.debug(f'Ended job_name: {job_name} pipeline: {pipeline}')
if pipeline == PipelineName.dicom_edit.name:
my_final_status = 'failed' if job.status.failed else 'succeeded'
logger.debug(f'{job_name}: {my_final_status}')
if my_final_status == 'succeeded':
self.delete_job(job_name)
else:
logger.warning('Terminating creating metadata')
elif pipeline in (PipelineName.DATA_TRANSFER_FOLDER.value, PipelineName.DATA_DELETE_FOLDER.value):
my_final_status = 'failed' if job.status.failed else 'succeeded'
logger.debug(f'{job_name}: {my_final_status}')
if my_final_status == 'succeeded':
self.delete_job(job_name)
else:
annotations = job.spec.template.metadata.annotations
if pipeline == PipelineName.DATA_TRANSFER_FOLDER.value:
TransferFailed(self.settings, annotations, 'on_data_transfer_failed').handle()
elif pipeline == PipelineName.DATA_DELETE_FOLDER.value:
DeleteFailed(self.settings, annotations, 'on_data_delete_failed').handle()
logger.warning('Terminating creating metadata')
else:
logger.warning(f'Unknown pipeline job: {pipeline}')
my_final_status = 'failed' if job.status.failed else 'succeeded'
if my_final_status == 'succeeded':
self.delete_job(job_name)
else:
logger.info(f'Job {job_name} has been skipped.')
except Exception:
logger.exception('Internal Error')
def delete_job(self, job_name) -> None:
try:
response = self.batch_api.delete_namespaced_job(
job_name, self.settings.K8S_NAMESPACE, propagation_policy='Foreground'
)
logger.info(f'Received response from delete_namespaced_job: {response}')
logger.info(f'Deleted job: {job_name}')
except Exception:
logger.exception('Internal Error')
def get_stream(self) -> Generator:
stream = self.watcher.stream(self.batch_api.list_namespaced_job, self.settings.K8S_NAMESPACE)
return stream
def run(self) -> None:
logger.info('Start Pipeline Job Stream Watching')
stream = self.get_stream()
for event in stream:
event_type = event['type']
job = event['object']
finalizers = event['object'].metadata.finalizers
if event_type == PipelineJobEvent.MODIFIED.name and not finalizers:
self.watch_callback(job)