@@ -17,13 +17,14 @@ available [here](https://docs.docker.com/engine/install/).
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Then, you will need to set up the [ ` forklift ` ] ( https://github.com/PlanktoScope/forklift ) tool on
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your computer. Setup instructions are available
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[ here] ( https://github.com/PlanktoScope/forklift?tab=readme-ov-file#downloadinstall-forklift ) . Note
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- that currently ` forklift ` is only tested for Linux computers.
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+ that currently ` forklift ` is only tested for Linux computers, and that Forklift is still an
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+ experimental prototype.
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### Deployment
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The instructions below assume that you are using a version of the ` forklift ` tool which is greater
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- than or equal to v0.7.0 (but less than v0.8.0, which has not yet been released yet); other versions
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- of the ` forklift ` tool may behave differently and thus may require different commands than what is
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+ than or equal to v0.7.0 (but less than v0.8.0, which has not been released yet); other versions of
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+ the ` forklift ` tool may behave differently and thus may require different commands than what is
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described below:
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#### First-time deployment
@@ -39,8 +40,8 @@ specified by this pallet and delete any Docker containers not specified by this
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deployments.
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If your user is [ in the ` docker ` group] ( https://docs.docker.com/engine/install/linux-postinstall/#manage-docker-as-a-non-root-user )
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- (so that you don't need to use ` sudo ` when running ` docker ` commands), then you can avoid using
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- ` sudo ` with the ` forklift ` command :
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+ (so that you don't need to use ` sudo ` when running ` docker ` commands), then you don't need to use
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+ ` sudo ` with ` forklift ` :
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```
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forklift pallet switch --apply github.com/PlanktoScope/pallet-segmenter@edge
@@ -72,7 +73,7 @@ forklift stage apply
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After you have applied the pallet so that the containers are running, you can access the Node-RED
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dashboard from your web browser at < http://localhost:1880/ui > , or you can programmatically interact
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- with the segmenter over MQTT via < mqtt://localhost:1883 > (e.g. using
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+ with the segmenter over MQTT via ` mqtt://localhost:1883 ` (e.g. using
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[ github.com/PlanktoScope/cli] ( https://github.com/PlanktoScope/cli ) ).
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You can also access the Node-RED dashboard editor from your web browser at
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< http://localhost:1880/admin > .
@@ -87,10 +88,9 @@ used for running the segmenter) will be to use the filebrowser app in your web b
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Before you can use the Node-RED dashboard, you will need to create a folder at
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` ~/.local/share/planktoscope/data/img ` (which you can do by just using the filebrowser app to create
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- a new folder named ` img ` in the top level, at < http://localhost:9000/files/ > ), and then you should
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- upload/copy your input datasets into that folder. Then you can press the "Update acquisition's
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- folder list" button in the Node-RED dashboard, which should cause your input datasets to be listed
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- in the dashboard.
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+ a new folder named ` img ` at < http://localhost:9000/files/ > ), and then you should upload/copy your
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+ input datasets into that folder. Then you can press the "Update acquisition's folder list" button in
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+ the Node-RED dashboard, which should cause your input datasets to be listed in the dashboard.
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### Forking
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