From af84a5e088ddf176de611b397adcf2b49fa8a450 Mon Sep 17 00:00:00 2001
From: Michael Pollmeier <michael@michaelpollmeier.com>
Date: Tue, 27 Aug 2024 08:28:24 +0200
Subject: [PATCH 1/8] upgrade deps (#1784)

---
 build.sbt | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/build.sbt b/build.sbt
index cbaf5733a..0bb9bfe39 100644
--- a/build.sbt
+++ b/build.sbt
@@ -1,7 +1,7 @@
 name := "codepropertygraph"
 
 // parsed by project/Versions.scala, updated by updateDependencies.sh
-val flatgraphVersion = "0.0.86"
+val flatgraphVersion = "0.0.87"
 
 inThisBuild(
   List(

From 8f975f853c056f3b8d0d119f9b1e8c367ea5a753 Mon Sep 17 00:00:00 2001
From: maltek <1694194+maltek@users.noreply.github.com>
Date: Thu, 12 Sep 2024 11:32:13 +0200
Subject: [PATCH 2/8] update flatgraph (#1785)

also make updateDependencies.sh compatible with non-GNU sed variants
---
 build.sbt             |  2 +-
 updateDependencies.sh | 14 ++++++++++++--
 2 files changed, 13 insertions(+), 3 deletions(-)

diff --git a/build.sbt b/build.sbt
index 0bb9bfe39..4756cd411 100644
--- a/build.sbt
+++ b/build.sbt
@@ -1,7 +1,7 @@
 name := "codepropertygraph"
 
 // parsed by project/Versions.scala, updated by updateDependencies.sh
-val flatgraphVersion = "0.0.87"
+val flatgraphVersion = "0.0.88"
 
 inThisBuild(
   List(
diff --git a/updateDependencies.sh b/updateDependencies.sh
index f5c02c42b..f0f988f7b 100755
--- a/updateDependencies.sh
+++ b/updateDependencies.sh
@@ -9,6 +9,16 @@ check_installed() {
   fi
 }
 
+function sedi() {
+  if sed --version 2> /dev/null | grep -q 'GNU' ; then
+    # GNU sed does not like a second argument for -i
+    sed -i "$@"
+  else
+    # but macOS (FreeBSD) sed needs it
+    sed -i '' "$@"
+  fi
+}
+
 check_installed curl
 
 # check if xmllint is installed
@@ -57,13 +67,13 @@ function update {
     if [ "$NON_INTERACTIVE_OPTION" == "--non-interactive" ]
     then
       echo "non-interactive mode, auto-updating $NAME: $OLD_VERSION -> $VERSION"
-      sed -i "s/$SEARCH/$REPLACE/" build.sbt
+      sedi "s/$SEARCH/$REPLACE/" build.sbt
     else
       echo "update $NAME: $OLD_VERSION -> $VERSION? [Y/n]"
       read ANSWER
       if [ -z $ANSWER ] || [ "y" == $ANSWER ] || [ "Y" == $ANSWER ]
       then
-        sed -i "s/$SEARCH/$REPLACE/" build.sbt
+        sedi "s/$SEARCH/$REPLACE/" build.sbt
       fi
     fi
   fi

From 25e82b1681d717176c43dd15c0a33007fe0b0bab Mon Sep 17 00:00:00 2001
From: bbrehm <bernhard@shiftleft.io>
Date: Mon, 16 Sep 2024 19:12:32 +0200
Subject: [PATCH 3/8] bump flatgraph, properly log transitive changes (#1786)

---
 build.sbt                                                  | 2 +-
 .../src/main/scala/io/shiftleft/passes/CpgPass.scala       | 7 +------
 2 files changed, 2 insertions(+), 7 deletions(-)

diff --git a/build.sbt b/build.sbt
index 4756cd411..986af0300 100644
--- a/build.sbt
+++ b/build.sbt
@@ -1,7 +1,7 @@
 name := "codepropertygraph"
 
 // parsed by project/Versions.scala, updated by updateDependencies.sh
-val flatgraphVersion = "0.0.88"
+val flatgraphVersion = "0.0.89"
 
 inThisBuild(
   List(
diff --git a/codepropertygraph/src/main/scala/io/shiftleft/passes/CpgPass.scala b/codepropertygraph/src/main/scala/io/shiftleft/passes/CpgPass.scala
index 42228d6cd..58509d6f3 100644
--- a/codepropertygraph/src/main/scala/io/shiftleft/passes/CpgPass.scala
+++ b/codepropertygraph/src/main/scala/io/shiftleft/passes/CpgPass.scala
@@ -75,12 +75,7 @@ abstract class ForkJoinParallelCpgPass[T <: AnyRef](cpg: Cpg, @nowarn outName: S
       nanosBuilt = System.nanoTime()
       nDiff = diffGraph.size
 
-      // TODO how about `nDiffT` which seems to count the number of modifications..
-      //      nDiffT = overflowdb.BatchedUpdate
-      //        .applyDiff(cpg.graph, diffGraph, null)
-      //        .transitiveModifications()
-
-      flatgraph.DiffGraphApplier.applyDiff(cpg.graph, diffGraph)
+      nDiffT = flatgraph.DiffGraphApplier.applyDiff(cpg.graph, diffGraph)
     } catch {
       case exc: Exception =>
         baseLogger.error(s"Pass ${name} failed", exc)

From 9d3a2e2a539fdcd8d205272ab88cf15a52d92ee7 Mon Sep 17 00:00:00 2001
From: Michael Pollmeier <michael@michaelpollmeier.com>
Date: Thu, 17 Oct 2024 11:18:47 +0200
Subject: [PATCH 4/8] upgrade deps (#1787)

---
 build.sbt                | 2 +-
 project/build.properties | 2 +-
 2 files changed, 2 insertions(+), 2 deletions(-)

diff --git a/build.sbt b/build.sbt
index 986af0300..30e900949 100644
--- a/build.sbt
+++ b/build.sbt
@@ -1,7 +1,7 @@
 name := "codepropertygraph"
 
 // parsed by project/Versions.scala, updated by updateDependencies.sh
-val flatgraphVersion = "0.0.89"
+val flatgraphVersion = "0.0.90"
 
 inThisBuild(
   List(
diff --git a/project/build.properties b/project/build.properties
index ee4c672cd..0b699c305 100644
--- a/project/build.properties
+++ b/project/build.properties
@@ -1 +1 @@
-sbt.version=1.10.1
+sbt.version=1.10.2

From 4044a85e07848b249a6fb1df2fde99e0afccb371 Mon Sep 17 00:00:00 2001
From: Michael Pollmeier <michael@michaelpollmeier.com>
Date: Tue, 5 Nov 2024 15:19:33 +0100
Subject: [PATCH 5/8] upgrade deps (#1790)

---
 build.sbt                                                | 4 ++--
 .../generated/neighboraccessors/Binding.scala            | 6 ++++--
 .../generated/neighboraccessors/Block.scala              | 6 ++++--
 .../generated/neighboraccessors/Call.scala               | 3 ++-
 .../generated/neighboraccessors/FieldIdentifier.scala    | 9 ++++++---
 .../generated/neighboraccessors/Literal.scala            | 3 ++-
 .../generated/neighboraccessors/Member.scala             | 3 ++-
 .../generated/neighboraccessors/Method.scala             | 6 ++++--
 .../generated/neighboraccessors/MethodParameterIn.scala  | 6 ++++--
 .../generated/neighboraccessors/MethodParameterOut.scala | 3 ++-
 .../generated/neighboraccessors/MethodRef.scala          | 6 ++++--
 .../generated/neighboraccessors/MethodReturn.scala       | 3 ++-
 .../generated/neighboraccessors/Modifier.scala           | 6 ++++--
 .../generated/neighboraccessors/Return.scala             | 3 ++-
 .../generated/neighboraccessors/TypeParameter.scala      | 3 ++-
 project/build.properties                                 | 2 +-
 project/plugins.sbt                                      | 6 +++---
 17 files changed, 50 insertions(+), 28 deletions(-)

diff --git a/build.sbt b/build.sbt
index 30e900949..433c8abb4 100644
--- a/build.sbt
+++ b/build.sbt
@@ -1,12 +1,12 @@
 name := "codepropertygraph"
 
 // parsed by project/Versions.scala, updated by updateDependencies.sh
-val flatgraphVersion = "0.0.90"
+val flatgraphVersion = "0.0.97"
 
 inThisBuild(
   List(
     organization       := "io.shiftleft",
-    scalaVersion       := "3.4.2",
+    scalaVersion       := "3.4.3",
     resolvers ++= Seq(Resolver.mavenLocal, "Sonatype OSS" at "https://oss.sonatype.org/content/repositories/public"),
     packageDoc / publishArtifact := true,
     packageSrc / publishArtifact := true,
diff --git a/domainClasses/src/main/generated/io/shiftleft/codepropertygraph/generated/neighboraccessors/Binding.scala b/domainClasses/src/main/generated/io/shiftleft/codepropertygraph/generated/neighboraccessors/Binding.scala
index 5634b1c79..710922305 100644
--- a/domainClasses/src/main/generated/io/shiftleft/codepropertygraph/generated/neighboraccessors/Binding.scala
+++ b/domainClasses/src/main/generated/io/shiftleft/codepropertygraph/generated/neighboraccessors/Binding.scala
@@ -16,8 +16,9 @@ final class AccessNeighborsForBinding(val node: nodes.Binding) extends AnyVal {
     try { refOut.collectAll[nodes.Method].next() }
     catch {
       case e: java.util.NoSuchElementException =>
+        val nodeInfo = String.format("id=%d, (seq=%d)", node.id, node.seq)
         throw new flatgraph.SchemaViolationException(
-          "OUT edge with label REF to an adjacent METHOD is mandatory, but not defined for this BINDING node with seq=" + node.seq,
+          "OUT edge with label REF to an adjacent METHOD is mandatory, but not defined for this BINDING node with " + nodeInfo,
           e
         )
     }
@@ -34,8 +35,9 @@ final class AccessNeighborsForBinding(val node: nodes.Binding) extends AnyVal {
     try { bindsIn.collectAll[nodes.TypeDecl].next() }
     catch {
       case e: java.util.NoSuchElementException =>
+        val nodeInfo = String.format("id=%d, (seq=%d)", node.id, node.seq)
         throw new flatgraph.SchemaViolationException(
-          "IN edge with label BINDS to an adjacent TYPE_DECL is mandatory, but not defined for this BINDING node with seq=" + node.seq,
+          "IN edge with label BINDS to an adjacent TYPE_DECL is mandatory, but not defined for this BINDING node with " + nodeInfo,
           e
         )
     }
diff --git a/domainClasses/src/main/generated/io/shiftleft/codepropertygraph/generated/neighboraccessors/Block.scala b/domainClasses/src/main/generated/io/shiftleft/codepropertygraph/generated/neighboraccessors/Block.scala
index f88110eac..63e3bd591 100644
--- a/domainClasses/src/main/generated/io/shiftleft/codepropertygraph/generated/neighboraccessors/Block.scala
+++ b/domainClasses/src/main/generated/io/shiftleft/codepropertygraph/generated/neighboraccessors/Block.scala
@@ -11,8 +11,9 @@ final class AccessNeighborsForBlock(val node: nodes.Block) extends AnyVal {
     try { astIn.collectAll[nodes.Block].next() }
     catch {
       case e: java.util.NoSuchElementException =>
+        val nodeInfo = String.format("id=%d, (seq=%d)", node.id, node.seq)
         throw new flatgraph.SchemaViolationException(
-          "IN edge with label AST to an adjacent BLOCK is mandatory, but not defined for this BLOCK node with seq=" + node.seq,
+          "IN edge with label AST to an adjacent BLOCK is mandatory, but not defined for this BLOCK node with " + nodeInfo,
           e
         )
     }
@@ -268,8 +269,9 @@ final class AccessNeighborsForBlock(val node: nodes.Block) extends AnyVal {
     try { astIn.collectAll[nodes.Method].next() }
     catch {
       case e: java.util.NoSuchElementException =>
+        val nodeInfo = String.format("id=%d, (seq=%d)", node.id, node.seq)
         throw new flatgraph.SchemaViolationException(
-          "IN edge with label AST to an adjacent METHOD is mandatory, but not defined for this BLOCK node with seq=" + node.seq,
+          "IN edge with label AST to an adjacent METHOD is mandatory, but not defined for this BLOCK node with " + nodeInfo,
           e
         )
     }
diff --git a/domainClasses/src/main/generated/io/shiftleft/codepropertygraph/generated/neighboraccessors/Call.scala b/domainClasses/src/main/generated/io/shiftleft/codepropertygraph/generated/neighboraccessors/Call.scala
index 090aabd50..33e10e97a 100644
--- a/domainClasses/src/main/generated/io/shiftleft/codepropertygraph/generated/neighboraccessors/Call.scala
+++ b/domainClasses/src/main/generated/io/shiftleft/codepropertygraph/generated/neighboraccessors/Call.scala
@@ -119,8 +119,9 @@ final class AccessNeighborsForCall(val node: nodes.Call) extends AnyVal {
     try { astIn.collectAll[nodes.ControlStructure].next() }
     catch {
       case e: java.util.NoSuchElementException =>
+        val nodeInfo = String.format("id=%d, (seq=%d)", node.id, node.seq)
         throw new flatgraph.SchemaViolationException(
-          "IN edge with label AST to an adjacent CONTROL_STRUCTURE is mandatory, but not defined for this CALL node with seq=" + node.seq,
+          "IN edge with label AST to an adjacent CONTROL_STRUCTURE is mandatory, but not defined for this CALL node with " + nodeInfo,
           e
         )
     }
diff --git a/domainClasses/src/main/generated/io/shiftleft/codepropertygraph/generated/neighboraccessors/FieldIdentifier.scala b/domainClasses/src/main/generated/io/shiftleft/codepropertygraph/generated/neighboraccessors/FieldIdentifier.scala
index d0d9f5a72..574497884 100644
--- a/domainClasses/src/main/generated/io/shiftleft/codepropertygraph/generated/neighboraccessors/FieldIdentifier.scala
+++ b/domainClasses/src/main/generated/io/shiftleft/codepropertygraph/generated/neighboraccessors/FieldIdentifier.scala
@@ -35,8 +35,9 @@ final class AccessNeighborsForFieldIdentifier(val node: nodes.FieldIdentifier) e
     try { argumentIn.collectAll[nodes.Call].next() }
     catch {
       case e: java.util.NoSuchElementException =>
+        val nodeInfo = String.format("id=%d, (seq=%d)", node.id, node.seq)
         throw new flatgraph.SchemaViolationException(
-          "IN edge with label ARGUMENT to an adjacent CALL is mandatory, but not defined for this FIELD_IDENTIFIER node with seq=" + node.seq,
+          "IN edge with label ARGUMENT to an adjacent CALL is mandatory, but not defined for this FIELD_IDENTIFIER node with " + nodeInfo,
           e
         )
     }
@@ -48,8 +49,9 @@ final class AccessNeighborsForFieldIdentifier(val node: nodes.FieldIdentifier) e
     try { astIn.collectAll[nodes.Call].next() }
     catch {
       case e: java.util.NoSuchElementException =>
+        val nodeInfo = String.format("id=%d, (seq=%d)", node.id, node.seq)
         throw new flatgraph.SchemaViolationException(
-          "IN edge with label AST to an adjacent CALL is mandatory, but not defined for this FIELD_IDENTIFIER node with seq=" + node.seq,
+          "IN edge with label AST to an adjacent CALL is mandatory, but not defined for this FIELD_IDENTIFIER node with " + nodeInfo,
           e
         )
     }
@@ -69,8 +71,9 @@ final class AccessNeighborsForFieldIdentifier(val node: nodes.FieldIdentifier) e
     try { cfgOut.collectAll[nodes.Call].next() }
     catch {
       case e: java.util.NoSuchElementException =>
+        val nodeInfo = String.format("id=%d, (seq=%d)", node.id, node.seq)
         throw new flatgraph.SchemaViolationException(
-          "OUT edge with label CFG to an adjacent CALL is mandatory, but not defined for this FIELD_IDENTIFIER node with seq=" + node.seq,
+          "OUT edge with label CFG to an adjacent CALL is mandatory, but not defined for this FIELD_IDENTIFIER node with " + nodeInfo,
           e
         )
     }
diff --git a/domainClasses/src/main/generated/io/shiftleft/codepropertygraph/generated/neighboraccessors/Literal.scala b/domainClasses/src/main/generated/io/shiftleft/codepropertygraph/generated/neighboraccessors/Literal.scala
index 32946b36a..84b733e1e 100644
--- a/domainClasses/src/main/generated/io/shiftleft/codepropertygraph/generated/neighboraccessors/Literal.scala
+++ b/domainClasses/src/main/generated/io/shiftleft/codepropertygraph/generated/neighboraccessors/Literal.scala
@@ -99,8 +99,9 @@ final class AccessNeighborsForLiteral(val node: nodes.Literal) extends AnyVal {
     try { astIn.collectAll[nodes.ControlStructure].next() }
     catch {
       case e: java.util.NoSuchElementException =>
+        val nodeInfo = String.format("id=%d, (seq=%d)", node.id, node.seq)
         throw new flatgraph.SchemaViolationException(
-          "IN edge with label AST to an adjacent CONTROL_STRUCTURE is mandatory, but not defined for this LITERAL node with seq=" + node.seq,
+          "IN edge with label AST to an adjacent CONTROL_STRUCTURE is mandatory, but not defined for this LITERAL node with " + nodeInfo,
           e
         )
     }
diff --git a/domainClasses/src/main/generated/io/shiftleft/codepropertygraph/generated/neighboraccessors/Member.scala b/domainClasses/src/main/generated/io/shiftleft/codepropertygraph/generated/neighboraccessors/Member.scala
index d8a69ce2b..2ae74df83 100644
--- a/domainClasses/src/main/generated/io/shiftleft/codepropertygraph/generated/neighboraccessors/Member.scala
+++ b/domainClasses/src/main/generated/io/shiftleft/codepropertygraph/generated/neighboraccessors/Member.scala
@@ -36,8 +36,9 @@ final class AccessNeighborsForMember(val node: nodes.Member) extends AnyVal {
     try { astIn.collectAll[nodes.TypeDecl].next() }
     catch {
       case e: java.util.NoSuchElementException =>
+        val nodeInfo = String.format("id=%d, (seq=%d)", node.id, node.seq)
         throw new flatgraph.SchemaViolationException(
-          "IN edge with label AST to an adjacent TYPE_DECL is mandatory, but not defined for this MEMBER node with seq=" + node.seq,
+          "IN edge with label AST to an adjacent TYPE_DECL is mandatory, but not defined for this MEMBER node with " + nodeInfo,
           e
         )
     }
diff --git a/domainClasses/src/main/generated/io/shiftleft/codepropertygraph/generated/neighboraccessors/Method.scala b/domainClasses/src/main/generated/io/shiftleft/codepropertygraph/generated/neighboraccessors/Method.scala
index 932490b5a..e76fc91e5 100644
--- a/domainClasses/src/main/generated/io/shiftleft/codepropertygraph/generated/neighboraccessors/Method.scala
+++ b/domainClasses/src/main/generated/io/shiftleft/codepropertygraph/generated/neighboraccessors/Method.scala
@@ -257,8 +257,9 @@ final class AccessNeighborsForMethod(val node: nodes.Method) extends AnyVal {
     try { astOut.collectAll[nodes.MethodReturn].next() }
     catch {
       case e: java.util.NoSuchElementException =>
+        val nodeInfo = String.format("id=%d, (seq=%d)", node.id, node.seq)
         throw new flatgraph.SchemaViolationException(
-          "OUT edge with label AST to an adjacent METHOD_RETURN is mandatory, but not defined for this METHOD node with seq=" + node.seq,
+          "OUT edge with label AST to an adjacent METHOD_RETURN is mandatory, but not defined for this METHOD node with " + nodeInfo,
           e
         )
     }
@@ -293,8 +294,9 @@ final class AccessNeighborsForMethod(val node: nodes.Method) extends AnyVal {
     try { astOut.collectAll[nodes.Block].next() }
     catch {
       case e: java.util.NoSuchElementException =>
+        val nodeInfo = String.format("id=%d, (seq=%d)", node.id, node.seq)
         throw new flatgraph.SchemaViolationException(
-          "OUT edge with label AST to an adjacent BLOCK is mandatory, but not defined for this METHOD node with seq=" + node.seq,
+          "OUT edge with label AST to an adjacent BLOCK is mandatory, but not defined for this METHOD node with " + nodeInfo,
           e
         )
     }
diff --git a/domainClasses/src/main/generated/io/shiftleft/codepropertygraph/generated/neighboraccessors/MethodParameterIn.scala b/domainClasses/src/main/generated/io/shiftleft/codepropertygraph/generated/neighboraccessors/MethodParameterIn.scala
index 921e39a38..1cacc10c3 100644
--- a/domainClasses/src/main/generated/io/shiftleft/codepropertygraph/generated/neighboraccessors/MethodParameterIn.scala
+++ b/domainClasses/src/main/generated/io/shiftleft/codepropertygraph/generated/neighboraccessors/MethodParameterIn.scala
@@ -87,8 +87,9 @@ final class AccessNeighborsForMethodParameterIn(val node: nodes.MethodParameterI
     try { astIn.collectAll[nodes.Method].next() }
     catch {
       case e: java.util.NoSuchElementException =>
+        val nodeInfo = String.format("id=%d, (seq=%d)", node.id, node.seq)
         throw new flatgraph.SchemaViolationException(
-          "IN edge with label AST to an adjacent METHOD is mandatory, but not defined for this METHOD_PARAMETER_IN node with seq=" + node.seq,
+          "IN edge with label AST to an adjacent METHOD is mandatory, but not defined for this METHOD_PARAMETER_IN node with " + nodeInfo,
           e
         )
     }
@@ -105,8 +106,9 @@ final class AccessNeighborsForMethodParameterIn(val node: nodes.MethodParameterI
     try { evalTypeOut.collectAll[nodes.Type].next() }
     catch {
       case e: java.util.NoSuchElementException =>
+        val nodeInfo = String.format("id=%d, (seq=%d)", node.id, node.seq)
         throw new flatgraph.SchemaViolationException(
-          "OUT edge with label EVAL_TYPE to an adjacent TYPE is mandatory, but not defined for this METHOD_PARAMETER_IN node with seq=" + node.seq,
+          "OUT edge with label EVAL_TYPE to an adjacent TYPE is mandatory, but not defined for this METHOD_PARAMETER_IN node with " + nodeInfo,
           e
         )
     }
diff --git a/domainClasses/src/main/generated/io/shiftleft/codepropertygraph/generated/neighboraccessors/MethodParameterOut.scala b/domainClasses/src/main/generated/io/shiftleft/codepropertygraph/generated/neighboraccessors/MethodParameterOut.scala
index 4f384adc6..919ef30a1 100644
--- a/domainClasses/src/main/generated/io/shiftleft/codepropertygraph/generated/neighboraccessors/MethodParameterOut.scala
+++ b/domainClasses/src/main/generated/io/shiftleft/codepropertygraph/generated/neighboraccessors/MethodParameterOut.scala
@@ -49,8 +49,9 @@ final class AccessNeighborsForMethodParameterOut(val node: nodes.MethodParameter
     try { astIn.collectAll[nodes.Method].next() }
     catch {
       case e: java.util.NoSuchElementException =>
+        val nodeInfo = String.format("id=%d, (seq=%d)", node.id, node.seq)
         throw new flatgraph.SchemaViolationException(
-          "IN edge with label AST to an adjacent METHOD is mandatory, but not defined for this METHOD_PARAMETER_OUT node with seq=" + node.seq,
+          "IN edge with label AST to an adjacent METHOD is mandatory, but not defined for this METHOD_PARAMETER_OUT node with " + nodeInfo,
           e
         )
     }
diff --git a/domainClasses/src/main/generated/io/shiftleft/codepropertygraph/generated/neighboraccessors/MethodRef.scala b/domainClasses/src/main/generated/io/shiftleft/codepropertygraph/generated/neighboraccessors/MethodRef.scala
index 3f02cef0b..7f9dd5c51 100644
--- a/domainClasses/src/main/generated/io/shiftleft/codepropertygraph/generated/neighboraccessors/MethodRef.scala
+++ b/domainClasses/src/main/generated/io/shiftleft/codepropertygraph/generated/neighboraccessors/MethodRef.scala
@@ -99,8 +99,9 @@ final class AccessNeighborsForMethodRef(val node: nodes.MethodRef) extends AnyVa
     try { astIn.collectAll[nodes.ControlStructure].next() }
     catch {
       case e: java.util.NoSuchElementException =>
+        val nodeInfo = String.format("id=%d, (seq=%d)", node.id, node.seq)
         throw new flatgraph.SchemaViolationException(
-          "IN edge with label AST to an adjacent CONTROL_STRUCTURE is mandatory, but not defined for this METHOD_REF node with seq=" + node.seq,
+          "IN edge with label AST to an adjacent CONTROL_STRUCTURE is mandatory, but not defined for this METHOD_REF node with " + nodeInfo,
           e
         )
     }
@@ -449,8 +450,9 @@ final class AccessNeighborsForMethodRef(val node: nodes.MethodRef) extends AnyVa
     try { refOut.collectAll[nodes.Method].next() }
     catch {
       case e: java.util.NoSuchElementException =>
+        val nodeInfo = String.format("id=%d, (seq=%d)", node.id, node.seq)
         throw new flatgraph.SchemaViolationException(
-          "OUT edge with label REF to an adjacent METHOD is mandatory, but not defined for this METHOD_REF node with seq=" + node.seq,
+          "OUT edge with label REF to an adjacent METHOD is mandatory, but not defined for this METHOD_REF node with " + nodeInfo,
           e
         )
     }
diff --git a/domainClasses/src/main/generated/io/shiftleft/codepropertygraph/generated/neighboraccessors/MethodReturn.scala b/domainClasses/src/main/generated/io/shiftleft/codepropertygraph/generated/neighboraccessors/MethodReturn.scala
index df4d2d43c..28476e63a 100644
--- a/domainClasses/src/main/generated/io/shiftleft/codepropertygraph/generated/neighboraccessors/MethodReturn.scala
+++ b/domainClasses/src/main/generated/io/shiftleft/codepropertygraph/generated/neighboraccessors/MethodReturn.scala
@@ -97,8 +97,9 @@ final class AccessNeighborsForMethodReturn(val node: nodes.MethodReturn) extends
     try { astIn.collectAll[nodes.Method].next() }
     catch {
       case e: java.util.NoSuchElementException =>
+        val nodeInfo = String.format("id=%d, (seq=%d)", node.id, node.seq)
         throw new flatgraph.SchemaViolationException(
-          "IN edge with label AST to an adjacent METHOD is mandatory, but not defined for this METHOD_RETURN node with seq=" + node.seq,
+          "IN edge with label AST to an adjacent METHOD is mandatory, but not defined for this METHOD_RETURN node with " + nodeInfo,
           e
         )
     }
diff --git a/domainClasses/src/main/generated/io/shiftleft/codepropertygraph/generated/neighboraccessors/Modifier.scala b/domainClasses/src/main/generated/io/shiftleft/codepropertygraph/generated/neighboraccessors/Modifier.scala
index bf0cf4046..926a6b3af 100644
--- a/domainClasses/src/main/generated/io/shiftleft/codepropertygraph/generated/neighboraccessors/Modifier.scala
+++ b/domainClasses/src/main/generated/io/shiftleft/codepropertygraph/generated/neighboraccessors/Modifier.scala
@@ -19,8 +19,9 @@ final class AccessNeighborsForModifier(val node: nodes.Modifier) extends AnyVal
     try { astIn.collectAll[nodes.Method].next() }
     catch {
       case e: java.util.NoSuchElementException =>
+        val nodeInfo = String.format("id=%d, (seq=%d)", node.id, node.seq)
         throw new flatgraph.SchemaViolationException(
-          "IN edge with label AST to an adjacent METHOD is mandatory, but not defined for this MODIFIER node with seq=" + node.seq,
+          "IN edge with label AST to an adjacent METHOD is mandatory, but not defined for this MODIFIER node with " + nodeInfo,
           e
         )
     }
@@ -32,8 +33,9 @@ final class AccessNeighborsForModifier(val node: nodes.Modifier) extends AnyVal
     try { astIn.collectAll[nodes.TypeDecl].next() }
     catch {
       case e: java.util.NoSuchElementException =>
+        val nodeInfo = String.format("id=%d, (seq=%d)", node.id, node.seq)
         throw new flatgraph.SchemaViolationException(
-          "IN edge with label AST to an adjacent TYPE_DECL is mandatory, but not defined for this MODIFIER node with seq=" + node.seq,
+          "IN edge with label AST to an adjacent TYPE_DECL is mandatory, but not defined for this MODIFIER node with " + nodeInfo,
           e
         )
     }
diff --git a/domainClasses/src/main/generated/io/shiftleft/codepropertygraph/generated/neighboraccessors/Return.scala b/domainClasses/src/main/generated/io/shiftleft/codepropertygraph/generated/neighboraccessors/Return.scala
index 58a3a79d5..7a58913dc 100644
--- a/domainClasses/src/main/generated/io/shiftleft/codepropertygraph/generated/neighboraccessors/Return.scala
+++ b/domainClasses/src/main/generated/io/shiftleft/codepropertygraph/generated/neighboraccessors/Return.scala
@@ -311,8 +311,9 @@ final class AccessNeighborsForReturn(val node: nodes.Return) extends AnyVal {
     try { cfgOut.collectAll[nodes.MethodReturn].next() }
     catch {
       case e: java.util.NoSuchElementException =>
+        val nodeInfo = String.format("id=%d, (seq=%d)", node.id, node.seq)
         throw new flatgraph.SchemaViolationException(
-          "OUT edge with label CFG to an adjacent METHOD_RETURN is mandatory, but not defined for this RETURN node with seq=" + node.seq,
+          "OUT edge with label CFG to an adjacent METHOD_RETURN is mandatory, but not defined for this RETURN node with " + nodeInfo,
           e
         )
     }
diff --git a/domainClasses/src/main/generated/io/shiftleft/codepropertygraph/generated/neighboraccessors/TypeParameter.scala b/domainClasses/src/main/generated/io/shiftleft/codepropertygraph/generated/neighboraccessors/TypeParameter.scala
index 1b1b7adc7..8caffc569 100644
--- a/domainClasses/src/main/generated/io/shiftleft/codepropertygraph/generated/neighboraccessors/TypeParameter.scala
+++ b/domainClasses/src/main/generated/io/shiftleft/codepropertygraph/generated/neighboraccessors/TypeParameter.scala
@@ -11,8 +11,9 @@ final class AccessNeighborsForTypeParameter(val node: nodes.TypeParameter) exten
     try { astIn.collectAll[nodes.Method].next() }
     catch {
       case e: java.util.NoSuchElementException =>
+        val nodeInfo = String.format("id=%d, (seq=%d)", node.id, node.seq)
         throw new flatgraph.SchemaViolationException(
-          "IN edge with label AST to an adjacent METHOD is mandatory, but not defined for this TYPE_PARAMETER node with seq=" + node.seq,
+          "IN edge with label AST to an adjacent METHOD is mandatory, but not defined for this TYPE_PARAMETER node with " + nodeInfo,
           e
         )
     }
diff --git a/project/build.properties b/project/build.properties
index 0b699c305..09feeeed5 100644
--- a/project/build.properties
+++ b/project/build.properties
@@ -1 +1 @@
-sbt.version=1.10.2
+sbt.version=1.10.4
diff --git a/project/plugins.sbt b/project/plugins.sbt
index 89b523b44..45ec859f9 100644
--- a/project/plugins.sbt
+++ b/project/plugins.sbt
@@ -1,7 +1,7 @@
 addSbtPlugin("com.github.sbt"    % "sbt-protobuf"         % "0.7.1")
 addSbtPlugin("org.scalameta"     % "sbt-scalafmt"         % "2.4.6")
 addSbtPlugin("com.github.sbt"    % "sbt-findbugs"         % "2.0.0")
-addSbtPlugin("io.shiftleft"      % "sbt-ci-release-early" % "2.0.18")
-addSbtPlugin("com.dwijnand"      % "sbt-dynver"           % "4.1.1")
-addSbtPlugin("com.typesafe.sbt"  % "sbt-native-packager"  % "1.3.5")
+addSbtPlugin("io.shiftleft"      % "sbt-ci-release-early" % "2.0.48")
+addSbtPlugin("com.github.sbt"    % "sbt-dynver"           % "5.1.0")
+addSbtPlugin("com.github.sbt"    % "sbt-native-packager"  % "1.10.4")
 addSbtPlugin("io.joern"          % "sbt-flatgraph"        % Versions.flatgraph)

From 7dbc1711e480657d501ac34cf10d5c143a5fdcf8 Mon Sep 17 00:00:00 2001
From: Michael Pollmeier <michael@michaelpollmeier.com>
Date: Thu, 7 Nov 2024 09:34:21 +0100
Subject: [PATCH 6/8] upgrade deps (#1791)

---
 build.sbt                | 2 +-
 project/build.properties | 2 +-
 2 files changed, 2 insertions(+), 2 deletions(-)

diff --git a/build.sbt b/build.sbt
index 433c8abb4..9f911ab66 100644
--- a/build.sbt
+++ b/build.sbt
@@ -1,7 +1,7 @@
 name := "codepropertygraph"
 
 // parsed by project/Versions.scala, updated by updateDependencies.sh
-val flatgraphVersion = "0.0.97"
+val flatgraphVersion = "0.0.99"
 
 inThisBuild(
   List(
diff --git a/project/build.properties b/project/build.properties
index 09feeeed5..db1723b08 100644
--- a/project/build.properties
+++ b/project/build.properties
@@ -1 +1 @@
-sbt.version=1.10.4
+sbt.version=1.10.5

From 3e49ed19e4c7a46f9f9b6e827afde628303ca736 Mon Sep 17 00:00:00 2001
From: Michael Pollmeier <michael@michaelpollmeier.com>
Date: Wed, 11 Dec 2024 16:56:30 +0100
Subject: [PATCH 7/8] upgrade deps, scala 3.5.2 (#1793)

---
 build.sbt                | 4 ++--
 project/build.properties | 2 +-
 2 files changed, 3 insertions(+), 3 deletions(-)

diff --git a/build.sbt b/build.sbt
index 9f911ab66..b4fe642e3 100644
--- a/build.sbt
+++ b/build.sbt
@@ -1,12 +1,12 @@
 name := "codepropertygraph"
 
 // parsed by project/Versions.scala, updated by updateDependencies.sh
-val flatgraphVersion = "0.0.99"
+val flatgraphVersion = "0.1.1"
 
 inThisBuild(
   List(
     organization       := "io.shiftleft",
-    scalaVersion       := "3.4.3",
+    scalaVersion       := "3.5.2",
     resolvers ++= Seq(Resolver.mavenLocal, "Sonatype OSS" at "https://oss.sonatype.org/content/repositories/public"),
     packageDoc / publishArtifact := true,
     packageSrc / publishArtifact := true,
diff --git a/project/build.properties b/project/build.properties
index db1723b08..e88a0d817 100644
--- a/project/build.properties
+++ b/project/build.properties
@@ -1 +1 @@
-sbt.version=1.10.5
+sbt.version=1.10.6

From 9ef1ccbe4ca3531c3a63eabf0e3a3489e7d111b5 Mon Sep 17 00:00:00 2001
From: Michael Pollmeier <michael@michaelpollmeier.com>
Date: Mon, 16 Dec 2024 16:37:49 +0100
Subject: [PATCH 8/8] upgrade deps (#1795)

---
 build.sbt | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/build.sbt b/build.sbt
index b4fe642e3..218d9f658 100644
--- a/build.sbt
+++ b/build.sbt
@@ -1,7 +1,7 @@
 name := "codepropertygraph"
 
 // parsed by project/Versions.scala, updated by updateDependencies.sh
-val flatgraphVersion = "0.1.1"
+val flatgraphVersion = "0.1.2"
 
 inThisBuild(
   List(