SKL-pima-logisticregression.ipynb

{
 "cells": [
  {
   "cell_type": "code",
   "execution_count": 2,
   "metadata": {
    "collapsed": true
   },
   "outputs": [],
   "source": [
    "import pandas as pd\n",
    "import numpy as np\n",
    "\n",
    "from sklearn.linear_model import LogisticRegression\n",
    "from sklearn.ensemble import RandomForestClassifier\n",
    "from sklearn.svm import LinearSVC"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 35,
   "metadata": {},
   "outputs": [],
   "source": [
    "# Create classifiers\n",
    "lr = LogisticRegression()\n",
    "svc = LinearSVC(C=1.0)\n",
    "rfc = RandomForestClassifier(n_estimators=100)"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 36,
   "metadata": {
    "collapsed": true
   },
   "outputs": [],
   "source": [
    "pima = pd.read_csv(\"https://raw.githubusercontent.com/PyDataWorkshop/datasets/master/pima.csv\")"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 37,
   "metadata": {},
   "outputs": [
    {
     "data": {
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       "<table border=\"1\" class=\"dataframe\">\n",
       "  <thead>\n",
       "    <tr style=\"text-align: right;\">\n",
       "      <th></th>\n",
       "      <th>Preg</th>\n",
       "      <th>Gluc</th>\n",
       "      <th>Dias</th>\n",
       "      <th>Tric</th>\n",
       "      <th>2hSer</th>\n",
       "      <th>BM1</th>\n",
       "      <th>Diab</th>\n",
       "      <th>Age</th>\n",
       "      <th>Diab.1</th>\n",
       "    </tr>\n",
       "  </thead>\n",
       "  <tbody>\n",
       "    <tr>\n",
       "      <th>763</th>\n",
       "      <td>10</td>\n",
       "      <td>101</td>\n",
       "      <td>76</td>\n",
       "      <td>48</td>\n",
       "      <td>180</td>\n",
       "      <td>32.9</td>\n",
       "      <td>0.171</td>\n",
       "      <td>63</td>\n",
       "      <td>0</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>764</th>\n",
       "      <td>2</td>\n",
       "      <td>122</td>\n",
       "      <td>70</td>\n",
       "      <td>27</td>\n",
       "      <td>0</td>\n",
       "      <td>36.8</td>\n",
       "      <td>0.340</td>\n",
       "      <td>27</td>\n",
       "      <td>0</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>765</th>\n",
       "      <td>5</td>\n",
       "      <td>121</td>\n",
       "      <td>72</td>\n",
       "      <td>23</td>\n",
       "      <td>112</td>\n",
       "      <td>26.2</td>\n",
       "      <td>0.245</td>\n",
       "      <td>30</td>\n",
       "      <td>0</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>766</th>\n",
       "      <td>1</td>\n",
       "      <td>126</td>\n",
       "      <td>60</td>\n",
       "      <td>0</td>\n",
       "      <td>0</td>\n",
       "      <td>30.1</td>\n",
       "      <td>0.349</td>\n",
       "      <td>47</td>\n",
       "      <td>1</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>767</th>\n",
       "      <td>1</td>\n",
       "      <td>93</td>\n",
       "      <td>70</td>\n",
       "      <td>31</td>\n",
       "      <td>0</td>\n",
       "      <td>30.4</td>\n",
       "      <td>0.315</td>\n",
       "      <td>23</td>\n",
       "      <td>0</td>\n",
       "    </tr>\n",
       "  </tbody>\n",
       "</table>\n",
       "</div>"
      ],
      "text/plain": [
       "     Preg   Gluc  Dias  Tric  2hSer   BM1   Diab  Age  Diab.1\n",
       "763     10   101    76    48    180  32.9  0.171   63       0\n",
       "764      2   122    70    27      0  36.8  0.340   27       0\n",
       "765      5   121    72    23    112  26.2  0.245   30       0\n",
       "766      1   126    60     0      0  30.1  0.349   47       1\n",
       "767      1    93    70    31      0  30.4  0.315   23       0"
      ]
     },
     "execution_count": 37,
     "metadata": {},
     "output_type": "execute_result"
    }
   ],
   "source": [
    "pima.tail(5)"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 38,
   "metadata": {},
   "outputs": [
    {
     "name": "stdout",
     "output_type": "stream",
     "text": [
      "<class 'pandas.core.frame.DataFrame'>\n",
      "RangeIndex: 768 entries, 0 to 767\n",
      "Data columns (total 9 columns):\n",
      "Preg      768 non-null int64\n",
      "Gluc      768 non-null int64\n",
      "Dias      768 non-null int64\n",
      "Tric      768 non-null int64\n",
      "2hSer     768 non-null int64\n",
      "BM1       768 non-null float64\n",
      "Diab      768 non-null float64\n",
      "Age       768 non-null int64\n",
      "Diab.1    768 non-null int64\n",
      "dtypes: float64(2), int64(7)\n",
      "memory usage: 54.1 KB\n"
     ]
    }
   ],
   "source": [
    "pima.info()"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 39,
   "metadata": {},
   "outputs": [
    {
     "data": {
      "text/plain": [
       "(768, 9)"
      ]
     },
     "execution_count": 39,
     "metadata": {},
     "output_type": "execute_result"
    }
   ],
   "source": [
    "pima.shape"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 40,
   "metadata": {
    "collapsed": true
   },
   "outputs": [],
   "source": [
    "from sklearn.model_selection import train_test_split\n",
    "\n",
    "train, test = train_test_split(pima, test_size=0.2)"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 41,
   "metadata": {},
   "outputs": [
    {
     "data": {
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       "</style>\n",
       "<table border=\"1\" class=\"dataframe\">\n",
       "  <thead>\n",
       "    <tr style=\"text-align: right;\">\n",
       "      <th></th>\n",
       "      <th>Preg</th>\n",
       "      <th>Gluc</th>\n",
       "      <th>Dias</th>\n",
       "      <th>Tric</th>\n",
       "      <th>2hSer</th>\n",
       "      <th>BM1</th>\n",
       "      <th>Diab</th>\n",
       "      <th>Age</th>\n",
       "      <th>Diab.1</th>\n",
       "    </tr>\n",
       "  </thead>\n",
       "  <tbody>\n",
       "    <tr>\n",
       "      <th>408</th>\n",
       "      <td>8</td>\n",
       "      <td>197</td>\n",
       "      <td>74</td>\n",
       "      <td>0</td>\n",
       "      <td>0</td>\n",
       "      <td>25.9</td>\n",
       "      <td>1.191</td>\n",
       "      <td>39</td>\n",
       "      <td>1</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>441</th>\n",
       "      <td>2</td>\n",
       "      <td>83</td>\n",
       "      <td>66</td>\n",
       "      <td>23</td>\n",
       "      <td>50</td>\n",
       "      <td>32.2</td>\n",
       "      <td>0.497</td>\n",
       "      <td>22</td>\n",
       "      <td>0</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>746</th>\n",
       "      <td>1</td>\n",
       "      <td>147</td>\n",
       "      <td>94</td>\n",
       "      <td>41</td>\n",
       "      <td>0</td>\n",
       "      <td>49.3</td>\n",
       "      <td>0.358</td>\n",
       "      <td>27</td>\n",
       "      <td>1</td>\n",
       "    </tr>\n",
       "  </tbody>\n",
       "</table>\n",
       "</div>"
      ],
      "text/plain": [
       "     Preg   Gluc  Dias  Tric  2hSer   BM1   Diab  Age  Diab.1\n",
       "408      8   197    74     0      0  25.9  1.191   39       1\n",
       "441      2    83    66    23     50  32.2  0.497   22       0\n",
       "746      1   147    94    41      0  49.3  0.358   27       1"
      ]
     },
     "execution_count": 41,
     "metadata": {},
     "output_type": "execute_result"
    }
   ],
   "source": [
    "train.head(3)"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 42,
   "metadata": {},
   "outputs": [
    {
     "data": {
      "text/plain": [
       "(614, 9)"
      ]
     },
     "execution_count": 42,
     "metadata": {},
     "output_type": "execute_result"
    }
   ],
   "source": [
    "train.shape"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 43,
   "metadata": {},
   "outputs": [
    {
     "data": {
      "text/plain": [
       "(154, 9)"
      ]
     },
     "execution_count": 43,
     "metadata": {},
     "output_type": "execute_result"
    }
   ],
   "source": [
    "test.shape"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 44,
   "metadata": {},
   "outputs": [
    {
     "data": {
      "text/html": [
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       "</style>\n",
       "<table border=\"1\" class=\"dataframe\">\n",
       "  <thead>\n",
       "    <tr style=\"text-align: right;\">\n",
       "      <th></th>\n",
       "      <th>Preg</th>\n",
       "      <th>Gluc</th>\n",
       "      <th>Dias</th>\n",
       "      <th>Tric</th>\n",
       "      <th>2hSer</th>\n",
       "      <th>BM1</th>\n",
       "      <th>Diab</th>\n",
       "      <th>Age</th>\n",
       "    </tr>\n",
       "  </thead>\n",
       "  <tbody>\n",
       "    <tr>\n",
       "      <th>408</th>\n",
       "      <td>8</td>\n",
       "      <td>197</td>\n",
       "      <td>74</td>\n",
       "      <td>0</td>\n",
       "      <td>0</td>\n",
       "      <td>25.9</td>\n",
       "      <td>1.191</td>\n",
       "      <td>39</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>441</th>\n",
       "      <td>2</td>\n",
       "      <td>83</td>\n",
       "      <td>66</td>\n",
       "      <td>23</td>\n",
       "      <td>50</td>\n",
       "      <td>32.2</td>\n",
       "      <td>0.497</td>\n",
       "      <td>22</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>746</th>\n",
       "      <td>1</td>\n",
       "      <td>147</td>\n",
       "      <td>94</td>\n",
       "      <td>41</td>\n",
       "      <td>0</td>\n",
       "      <td>49.3</td>\n",
       "      <td>0.358</td>\n",
       "      <td>27</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>418</th>\n",
       "      <td>1</td>\n",
       "      <td>83</td>\n",
       "      <td>68</td>\n",
       "      <td>0</td>\n",
       "      <td>0</td>\n",
       "      <td>18.2</td>\n",
       "      <td>0.624</td>\n",
       "      <td>27</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>214</th>\n",
       "      <td>9</td>\n",
       "      <td>112</td>\n",
       "      <td>82</td>\n",
       "      <td>32</td>\n",
       "      <td>175</td>\n",
       "      <td>34.2</td>\n",
       "      <td>0.260</td>\n",
       "      <td>36</td>\n",
       "    </tr>\n",
       "  </tbody>\n",
       "</table>\n",
       "</div>"
      ],
      "text/plain": [
       "     Preg   Gluc  Dias  Tric  2hSer   BM1   Diab  Age\n",
       "408      8   197    74     0      0  25.9  1.191   39\n",
       "441      2    83    66    23     50  32.2  0.497   22\n",
       "746      1   147    94    41      0  49.3  0.358   27\n",
       "418      1    83    68     0      0  18.2  0.624   27\n",
       "214      9   112    82    32    175  34.2  0.260   36"
      ]
     },
     "execution_count": 44,
     "metadata": {},
     "output_type": "execute_result"
    }
   ],
   "source": [
    "train.iloc[:,:8].head(5)"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 45,
   "metadata": {
    "collapsed": true
   },
   "outputs": [],
   "source": [
    "train_feat = train.iloc[:,:8]\n",
    "train_targ = train[\"Diab.1\"]"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 46,
   "metadata": {},
   "outputs": [
    {
     "data": {
      "text/plain": [
       "(614, 8)"
      ]
     },
     "execution_count": 46,
     "metadata": {},
     "output_type": "execute_result"
    }
   ],
   "source": [
    "train_feat.shape"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 47,
   "metadata": {},
   "outputs": [
    {
     "data": {
      "text/plain": [
       "pandas.core.series.Series"
      ]
     },
     "execution_count": 47,
     "metadata": {},
     "output_type": "execute_result"
    }
   ],
   "source": [
    "type(train_targ)"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 48,
   "metadata": {},
   "outputs": [
    {
     "data": {
      "text/plain": [
       "pandas.core.series.Series"
      ]
     },
     "execution_count": 48,
     "metadata": {},
     "output_type": "execute_result"
    }
   ],
   "source": [
    "#train_targ.info()\n",
    "\n",
    "type(train_targ)"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 49,
   "metadata": {},
   "outputs": [
    {
     "data": {
      "text/plain": [
       "pandas.core.frame.DataFrame"
      ]
     },
     "execution_count": 49,
     "metadata": {},
     "output_type": "execute_result"
    }
   ],
   "source": [
    "type(train[[\"Diab.1\"]])"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 91,
   "metadata": {},
   "outputs": [
    {
     "name": "stdout",
     "output_type": "stream",
     "text": [
      "<class 'pandas.core.frame.DataFrame'>\n",
      "Int64Index: 614 entries, 408 to 307\n",
      "Data columns (total 1 columns):\n",
      "Diab.1    614 non-null int64\n",
      "dtypes: int64(1)\n",
      "memory usage: 29.6 KB\n"
     ]
    }
   ],
   "source": [
    "train[[\"Diab.1\"]].info()"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "### Set up Testing Data"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 92,
   "metadata": {
    "collapsed": true
   },
   "outputs": [],
   "source": [
    "test_feat = test.iloc[:,:8]\n",
    "test_targ = test[\"Diab.1\"]"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "### 1. Logistic Regression"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 142,
   "metadata": {},
   "outputs": [
    {
     "data": {
      "text/plain": [
       "LogisticRegression(C=1.0, class_weight=None, dual=False, fit_intercept=True,\n",
       "          intercept_scaling=1, max_iter=100, multi_class='ovr', n_jobs=1,\n",
       "          penalty='l2', random_state=None, solver='liblinear', tol=0.0001,\n",
       "          verbose=0, warm_start=False)"
      ]
     },
     "execution_count": 142,
     "metadata": {},
     "output_type": "execute_result"
    }
   ],
   "source": [
    "lr.fit(train_feat, train_targ)"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 144,
   "metadata": {},
   "outputs": [
    {
     "data": {
      "text/plain": [
       "0.76872964169381108"
      ]
     },
     "execution_count": 144,
     "metadata": {},
     "output_type": "execute_result"
    }
   ],
   "source": [
    "lr.score(train_feat, train_targ)"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 145,
   "metadata": {},
   "outputs": [
    {
     "data": {
      "text/plain": [
       "0.74675324675324672"
      ]
     },
     "execution_count": 145,
     "metadata": {},
     "output_type": "execute_result"
    }
   ],
   "source": [
    "lr.score(test_feat, test_targ)"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 147,
   "metadata": {
    "collapsed": true
   },
   "outputs": [],
   "source": [
    "## log-Odds / Logits / Odds Ratio"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 148,
   "metadata": {},
   "outputs": [
    {
     "data": {
      "text/plain": [
       "array([[  1.39038596e-01,   2.97083673e-02,  -1.88504815e-02,\n",
       "         -7.07639767e-04,  -3.17537218e-04,   4.87959450e-02,\n",
       "          6.52255796e-01,   6.14822195e-03]])"
      ]
     },
     "execution_count": 148,
     "metadata": {},
     "output_type": "execute_result"
    }
   ],
   "source": [
    "lr.coef_"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 149,
   "metadata": {},
   "outputs": [
    {
     "data": {
      "text/plain": [
       "array([[  1.39038596e-01],\n",
       "       [  2.97083673e-02],\n",
       "       [ -1.88504815e-02],\n",
       "       [ -7.07639767e-04],\n",
       "       [ -3.17537218e-04],\n",
       "       [  4.87959450e-02],\n",
       "       [  6.52255796e-01],\n",
       "       [  6.14822195e-03]])"
      ]
     },
     "execution_count": 149,
     "metadata": {},
     "output_type": "execute_result"
    }
   ],
   "source": [
    "np.transpose(lr.coef_)"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 150,
   "metadata": {},
   "outputs": [
    {
     "data": {
      "text/plain": [
       "array([0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 0, 0, 1, 0, 0, 1, 0, 0,\n",
       "       0, 0, 0, 0, 1, 0, 0, 1, 0, 0, 1, 0, 0, 0, 1, 0, 0, 0, 0, 1, 0, 0, 0,\n",
       "       0, 0, 0, 0, 0, 0, 0, 0, 1, 0, 0, 0, 0, 1, 0, 1, 0, 1, 0, 1, 0, 0, 1,\n",
       "       0, 1, 0, 0, 1, 0, 0, 0, 1, 0, 0, 0, 1, 0, 1, 0, 0, 1, 0, 0, 0, 0, 0,\n",
       "       0, 0, 0, 1, 0, 0, 1, 1, 0, 0, 0, 0, 0, 1, 0, 0, 1, 0, 1, 0, 0, 1, 1,\n",
       "       0, 0, 1, 0, 0, 0, 1, 0, 0, 1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 1, 0, 0,\n",
       "       0, 1, 0, 1, 0, 0, 1, 0, 1, 0, 0, 0, 0, 0, 1, 0])"
      ]
     },
     "execution_count": 150,
     "metadata": {},
     "output_type": "execute_result"
    }
   ],
   "source": [
    "lr.predict(test_feat)"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 151,
   "metadata": {
    "collapsed": true
   },
   "outputs": [],
   "source": [
    "preds = lr.predict(test_feat)"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 152,
   "metadata": {},
   "outputs": [
    {
     "data": {
      "text/html": [
       "<div>\n",
       "<style>\n",
       "    .dataframe thead tr:only-child th {\n",
       "        text-align: right;\n",
       "    }\n",
       "\n",
       "    .dataframe thead th {\n",
       "        text-align: left;\n",
       "    }\n",
       "\n",
       "    .dataframe tbody tr th {\n",
       "        vertical-align: top;\n",
       "    }\n",
       "</style>\n",
       "<table border=\"1\" class=\"dataframe\">\n",
       "  <thead>\n",
       "    <tr style=\"text-align: right;\">\n",
       "      <th>Diab.1</th>\n",
       "      <th>0</th>\n",
       "      <th>1</th>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>row_0</th>\n",
       "      <th></th>\n",
       "      <th></th>\n",
       "    </tr>\n",
       "  </thead>\n",
       "  <tbody>\n",
       "    <tr>\n",
       "      <th>0</th>\n",
       "      <td>93</td>\n",
       "      <td>23</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>1</th>\n",
       "      <td>16</td>\n",
       "      <td>22</td>\n",
       "    </tr>\n",
       "  </tbody>\n",
       "</table>\n",
       "</div>"
      ],
      "text/plain": [
       "Diab.1   0   1\n",
       "row_0         \n",
       "0       93  23\n",
       "1       16  22"
      ]
     },
     "execution_count": 152,
     "metadata": {},
     "output_type": "execute_result"
    }
   ],
   "source": [
    "pd.crosstab(preds,test_targ)"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 154,
   "metadata": {
    "collapsed": true
   },
   "outputs": [],
   "source": [
    "from sklearn.metrics import confusion_matrix"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 156,
   "metadata": {},
   "outputs": [
    {
     "data": {
      "text/plain": [
       "array([[345,  96],\n",
       "       [ 46, 127]])"
      ]
     },
     "execution_count": 156,
     "metadata": {},
     "output_type": "execute_result"
    }
   ],
   "source": [
    "confusion_matrix(lr.predict(train_feat),train_targ)"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 157,
   "metadata": {},
   "outputs": [
    {
     "data": {
      "text/plain": [
       "array([[93, 23],\n",
       "       [16, 22]])"
      ]
     },
     "execution_count": 157,
     "metadata": {},
     "output_type": "execute_result"
    }
   ],
   "source": [
    "confusion_matrix(lr.predict(test_feat),test_targ)"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "### 2. Random Forest Classifier"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 164,
   "metadata": {},
   "outputs": [
    {
     "data": {
      "text/plain": [
       "RandomForestClassifier(bootstrap=True, class_weight=None, criterion='gini',\n",
       "            max_depth=None, max_features='auto', max_leaf_nodes=None,\n",
       "            min_impurity_decrease=0.0, min_impurity_split=None,\n",
       "            min_samples_leaf=1, min_samples_split=2,\n",
       "            min_weight_fraction_leaf=0.0, n_estimators=100, n_jobs=1,\n",
       "            oob_score=False, random_state=None, verbose=0,\n",
       "            warm_start=False)"
      ]
     },
     "execution_count": 164,
     "metadata": {},
     "output_type": "execute_result"
    }
   ],
   "source": [
    "rfc.fit(train_feat, train_targ)"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 169,
   "metadata": {},
   "outputs": [
    {
     "data": {
      "text/plain": [
       "1.0"
      ]
     },
     "execution_count": 169,
     "metadata": {},
     "output_type": "execute_result"
    }
   ],
   "source": [
    "rfc.score(train_feat, train_targ)"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 170,
   "metadata": {},
   "outputs": [
    {
     "data": {
      "text/plain": [
       "0.74675324675324672"
      ]
     },
     "execution_count": 170,
     "metadata": {},
     "output_type": "execute_result"
    }
   ],
   "source": [
    "rfc.score(test_feat, test_targ)"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 109,
   "metadata": {},
   "outputs": [
    {
     "data": {
      "text/plain": [
       "array([1, 0, 1, 0, 1, 0, 1, 1, 0, 0])"
      ]
     },
     "execution_count": 109,
     "metadata": {},
     "output_type": "execute_result"
    }
   ],
   "source": [
    "rfc.predict(train_feat)[:10]"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 171,
   "metadata": {},
   "outputs": [
    {
     "data": {
      "text/plain": [
       "array([[391,   0],\n",
       "       [  0, 223]])"
      ]
     },
     "execution_count": 171,
     "metadata": {},
     "output_type": "execute_result"
    }
   ],
   "source": [
    "confusion_matrix(rfc.predict(train_feat),train_targ)"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 172,
   "metadata": {},
   "outputs": [
    {
     "data": {
      "text/plain": [
       "array([[89, 19],\n",
       "       [20, 26]])"
      ]
     },
     "execution_count": 172,
     "metadata": {},
     "output_type": "execute_result"
    }
   ],
   "source": [
    "confusion_matrix(rfc.predict(test_feat),test_targ)"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "### 3. Linear SVC Model"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 173,
   "metadata": {},
   "outputs": [
    {
     "data": {
      "text/plain": [
       "LinearSVC(C=1.0, class_weight=None, dual=True, fit_intercept=True,\n",
       "     intercept_scaling=1, loss='squared_hinge', max_iter=1000,\n",
       "     multi_class='ovr', penalty='l2', random_state=None, tol=0.0001,\n",
       "     verbose=0)"
      ]
     },
     "execution_count": 173,
     "metadata": {},
     "output_type": "execute_result"
    }
   ],
   "source": [
    "svc.fit(train_feat, train_targ)"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 176,
   "metadata": {},
   "outputs": [
    {
     "data": {
      "text/plain": [
       "0.64169381107491852"
      ]
     },
     "execution_count": 176,
     "metadata": {},
     "output_type": "execute_result"
    }
   ],
   "source": [
    "svc.score(train_feat, train_targ)"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 177,
   "metadata": {},
   "outputs": [
    {
     "data": {
      "text/plain": [
       "0.72077922077922074"
      ]
     },
     "execution_count": 177,
     "metadata": {},
     "output_type": "execute_result"
    }
   ],
   "source": [
    "svc.score(test_feat,test_targ)"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 178,
   "metadata": {},
   "outputs": [
    {
     "data": {
      "text/plain": [
       "array([[ 0.05006139,  0.00652587, -0.01092286, -0.0049177 ,  0.00081938,\n",
       "         0.00947821,  0.2188775 , -0.00120588]])"
      ]
     },
     "execution_count": 178,
     "metadata": {},
     "output_type": "execute_result"
    }
   ],
   "source": [
    "svc.coef_"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 179,
   "metadata": {},
   "outputs": [
    {
     "data": {
      "text/plain": [
       "array([[ 0.05006139],\n",
       "       [ 0.00652587],\n",
       "       [-0.01092286],\n",
       "       [-0.0049177 ],\n",
       "       [ 0.00081938],\n",
       "       [ 0.00947821],\n",
       "       [ 0.2188775 ],\n",
       "       [-0.00120588]])"
      ]
     },
     "execution_count": 179,
     "metadata": {},
     "output_type": "execute_result"
    }
   ],
   "source": [
    "np.transpose(svc.coef_)"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 125,
   "metadata": {},
   "outputs": [
    {
     "data": {
      "text/plain": [
       "array([1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 0, 0, 0, 0,\n",
       "       0, 0, 1, 0, 0, 0, 0, 0, 0, 0, 1, 0, 0, 0, 0, 0, 0, 0, 1, 1, 0, 0, 0,\n",
       "       0, 0, 0, 0, 0, 0, 1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0,\n",
       "       0, 1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 0, 0, 0, 0, 0, 0,\n",
       "       0, 0, 0, 0, 0, 0, 0, 0, 1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 0, 0, 0,\n",
       "       0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 0, 0, 0, 0, 0, 0, 0, 0,\n",
       "       0, 1, 0, 0, 0, 0, 0, 1, 0, 0, 0, 0, 0, 1, 0, 0, 0, 0, 0, 0, 0, 0, 0,\n",
       "       0, 1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 0, 0, 0, 0, 0, 0, 0, 0,\n",
       "       1, 0, 0, 0, 1, 1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 0, 0, 0,\n",
       "       0, 0, 0, 1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 0, 0, 0, 0, 0, 0, 0, 0,\n",
       "       0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 0, 0, 0,\n",
       "       0, 0, 0, 0, 0, 0, 0, 0, 1, 0, 0, 0, 1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0,\n",
       "       0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 0, 1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0,\n",
       "       0, 0, 1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0,\n",
       "       0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 0, 0, 0, 0, 0, 0, 1, 1, 0, 0, 0, 0,\n",
       "       0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 0, 0, 0, 0, 0, 0,\n",
       "       0, 0, 0, 0, 0, 1, 0, 0, 0, 0, 0, 0, 0, 0, 1, 0, 0, 0, 1, 0, 0, 0, 0,\n",
       "       0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 0, 0, 0, 0, 0,\n",
       "       0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 0, 1, 0, 0, 0, 0, 1, 1, 0, 1, 0, 0, 0,\n",
       "       1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0,\n",
       "       0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 0, 1, 0, 0, 1, 0, 0,\n",
       "       0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0,\n",
       "       0, 0, 1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 0, 1, 0,\n",
       "       0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 0, 0, 0, 0, 0, 0, 0, 0, 0,\n",
       "       0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0,\n",
       "       0, 0, 0, 0, 0, 0, 0, 0, 1, 0, 0, 0, 0, 0, 0, 0, 0, 1, 0, 0, 0, 0, 1,\n",
       "       0, 1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0])"
      ]
     },
     "execution_count": 125,
     "metadata": {},
     "output_type": "execute_result"
    }
   ],
   "source": [
    "svc.predict(train_feat)"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 126,
   "metadata": {
    "collapsed": true
   },
   "outputs": [],
   "source": [
    "preds = svc.predict(train_feat)"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 127,
   "metadata": {},
   "outputs": [
    {
     "data": {
      "text/html": [
       "<div>\n",
       "<style>\n",
       "    .dataframe thead tr:only-child th {\n",
       "        text-align: right;\n",
       "    }\n",
       "\n",
       "    .dataframe thead th {\n",
       "        text-align: left;\n",
       "    }\n",
       "\n",
       "    .dataframe tbody tr th {\n",
       "        vertical-align: top;\n",
       "    }\n",
       "</style>\n",
       "<table border=\"1\" class=\"dataframe\">\n",
       "  <thead>\n",
       "    <tr style=\"text-align: right;\">\n",
       "      <th>Diab.1</th>\n",
       "      <th>0</th>\n",
       "      <th>1</th>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>row_0</th>\n",
       "      <th></th>\n",
       "      <th></th>\n",
       "    </tr>\n",
       "  </thead>\n",
       "  <tbody>\n",
       "    <tr>\n",
       "      <th>0</th>\n",
       "      <td>381</td>\n",
       "      <td>178</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>1</th>\n",
       "      <td>10</td>\n",
       "      <td>45</td>\n",
       "    </tr>\n",
       "  </tbody>\n",
       "</table>\n",
       "</div>"
      ],
      "text/plain": [
       "Diab.1    0    1\n",
       "row_0           \n",
       "0       381  178\n",
       "1        10   45"
      ]
     },
     "execution_count": 127,
     "metadata": {},
     "output_type": "execute_result"
    }
   ],
   "source": [
    "pd.crosstab(preds,train_targ)"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 128,
   "metadata": {},
   "outputs": [
    {
     "data": {
      "text/plain": [
       "426"
      ]
     },
     "execution_count": 128,
     "metadata": {},
     "output_type": "execute_result"
    }
   ],
   "source": [
    "np.sum(np.diag(pd.crosstab(preds,train_targ)))"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 129,
   "metadata": {
    "collapsed": true
   },
   "outputs": [],
   "source": [
    "from sklearn.metrics import confusion_matrix"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 180,
   "metadata": {},
   "outputs": [
    {
     "data": {
      "text/plain": [
       "array([[389, 218],\n",
       "       [  2,   5]])"
      ]
     },
     "execution_count": 180,
     "metadata": {},
     "output_type": "execute_result"
    }
   ],
   "source": [
    "confusion_matrix(svc.predict(train_feat),train_targ)"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 181,
   "metadata": {},
   "outputs": [
    {
     "data": {
      "text/plain": [
       "array([[109,  43],\n",
       "       [  0,   2]])"
      ]
     },
     "execution_count": 181,
     "metadata": {},
     "output_type": "execute_result"
    }
   ],
   "source": [
    "confusion_matrix(svc.predict(test_feat),test_targ)"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": null,
   "metadata": {
    "collapsed": true
   },
   "outputs": [],
   "source": []
  }
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