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environment.yml
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environment.yml
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name: mpathic_env
channels:
- wireland
- conda-forge
- bioconda
- defaults
dependencies:
- appnope=0.1.3
- backcall=0.2.0
- backports=1.1
- backports.functools_lru_cache=1.6.4
- biopython=1.77
- ca-certificates=2022.6.15
- certifi=2021.5.30
- cycler=0.11.0
- decorator=5.1.1
- entrypoints=0.4
- freetype=2.11.0
- ipykernel=5.5.5
- ipython=7.16.1
- ipython_genutils=0.2.0
- jedi=0.17.0
- joblib=1.1.0
- jpeg=9e
- jupyter_client=7.1.2
- jupyter_core=4.8.1
- kiwisolver=1.3.1
- lcms2=2.12
- lerc=3.0
- libblas=3.9.0
- libcblas=3.9.0
- libcxx=14.0.5
- libdeflate=1.12
- libffi=3.4.2
- libgfortran=5.0.0
- libgfortran5=11.2.0
- liblapack=3.9.0
- libopenblas=0.3.20
- libpng=1.6.37
- libsodium=1.0.18
- libtiff=4.4.0
- libwebp-base=1.2.2
- libzlib=1.2.12
- llvm-openmp=14.0.4
- lz4-c=1.9.3
- matplotlib=3.3.4
- matplotlib-base=3.3.4
- mpathic=0.1.20
- mpmath=1.2.1
- ncurses=6.3
- nest-asyncio=1.5.5
- numpy=1.19.5
- olefile=0.46
- openjpeg=2.5.0
- openssl=1.1.1o
- pandas=1.1.5
- parso=0.8.3
- patsy=0.5.2
- pexpect=4.8.0
- pickleshare=0.7.5
- pillow=8.3.1
- pip=21.3.1
- prompt-toolkit=3.0.29
- ptyprocess=0.7.0
- pygments=2.12.0
- pymc=2.3.8
- pyparsing=3.0.9
- python=3.6.15
- python-dateutil=2.8.2
- python_abi=3.6
- pytz=2022.1
- pyzmq=22.3.0
- readline=8.1.2
- scikit-learn=0.24.2
- scipy=1.5.3
- seaborn=0.11.2
- seaborn-base=0.11.2
- setuptools=58.0.4
- six=1.16.0
- sqlite=3.38.5
- statsmodels=0.12.2
- threadpoolctl=3.1.0
- tk=8.6.12
- tornado=6.1
- traitlets=4.3.3
- wcwidth=0.2.5
- wheel=0.37.1
- xz=5.2.5
- zeromq=4.3.4
- zlib=1.2.12
- zstd=1.5.2
- pip:
- attrs==21.4.0
- importlib-metadata==4.8.3
- iniconfig==1.1.1
- logomaker==0.8
- packaging==21.3
- pluggy==1.0.0
- py==1.11.0
- pytest==7.0.1
- tomli==1.2.3
- typing-extensions==4.1.1
- watermark==2.0.2
- zipp==3.6.0
prefix: /Users/tomroeschinger/opt/anaconda3/envs/mpathic_env