fixed linting issues

Author: RabiyaF

fitbenchmarking/cli/main.py

@@ -76,68 +76,98 @@ def get_parser():
 
     root = Path(inspect.getfile(fitbenchmarking)).parent
 
-    parser.add_argument('-o', '--options-file',
-                        metavar='OPTIONS_FILE',
-                        default='',
-                        help='The path to a %(prog)s options file.')
-    parser.add_argument('-p', '--problem_sets',
-                        nargs='+',
-                        default=[root.joinpath("benchmark_problems",
-                                               "NIST",
-                                               "average_difficulty")],
-                        help='Paths to directories containing problem sets.')
-    parser.add_argument('-r', '--results_dir',
-                        metavar='RESULTS_DIR',
-                        default='',
-                        help='The directory to store resulting files in.')
-    parser.add_argument('-d', '--debug-mode',
-                        default=False,
-                        action='store_true',
-                        help='Enable debug mode (prints traceback).',)
-    parser.add_argument('-n', '--num_runs',
-                        metavar='NUM_RUNS',
-                        type=int,
-                        default=0,
-                        help="Set the number of runs to average "
-                        "each fit over.")
-    parser.add_argument('-a', '--algorithm_type',
-                        metavar='ALGORITHM_TYPE',
-                        nargs='+',
-                        type=str,
-                        default=[],
-                        help="Select what type of algorithm is used within a "
-                        "specific software.")
-    parser.add_argument('-s', '--software',
-                        metavar='SOFTWARE',
-                        nargs='+',
-                        type=str,
-                        default=[],
-                        help="Select the fitting software to benchmark.")
-    parser.add_argument('-j', '--jac_method',
-                        metavar='JAC_METHOD',
-                        nargs='+',
-                        type=str,
-                        default=[],
-                        help="Set the Jacobian to be used.")
-    parser.add_argument('-c', '--cost_func_type',
-                        metavar='COST_FUNC_TYPE',
-                        nargs='+',
-                        type=str,
-                        default=[],
-                        help="Set the cost functions to be used "
-                        "for the given data.")
-    parser.add_argument('-rt', '--runtime_metric',
-                        metavar='RUNTIME_METRIC',
-                        choices=['mean',
-                                 'minimum',
-                                 'maximum',
-                                 'first',
-                                 'median',
-                                 'harmonic',
-                                 'trim'],
-                        type=str,
-                        default='',
-                        help="Set the metric for the runtime.")
+    parser.add_argument(
+        "-o",
+        "--options-file",
+        metavar="OPTIONS_FILE",
+        default="",
+        help="The path to a %(prog)s options file.",
+    )
+    parser.add_argument(
+        "-p",
+        "--problem_sets",
+        nargs="+",
+        default=[
+            root.joinpath("benchmark_problems", "NIST", "average_difficulty")
+        ],
+        help="Paths to directories containing problem sets.",
+    )
+    parser.add_argument(
+        "-r",
+        "--results_dir",
+        metavar="RESULTS_DIR",
+        default="",
+        help="The directory to store resulting files in.",
+    )
+    parser.add_argument(
+        "-d",
+        "--debug-mode",
+        default=False,
+        action="store_true",
+        help="Enable debug mode (prints traceback).",
+    )
+    parser.add_argument(
+        "-n",
+        "--num_runs",
+        metavar="NUM_RUNS",
+        type=int,
+        default=0,
+        help="Set the number of runs to average " "each fit over.",
+    )
+    parser.add_argument(
+        "-a",
+        "--algorithm_type",
+        metavar="ALGORITHM_TYPE",
+        nargs="+",
+        type=str,
+        default=[],
+        help="Select what type of algorithm is used within a "
+        "specific software.",
+    )
+    parser.add_argument(
+        "-s",
+        "--software",
+        metavar="SOFTWARE",
+        nargs="+",
+        type=str,
+        default=[],
+        help="Select the fitting software to benchmark.",
+    )
+    parser.add_argument(
+        "-j",
+        "--jac_method",
+        metavar="JAC_METHOD",
+        nargs="+",
+        type=str,
+        default=[],
+        help="Set the Jacobian to be used.",
+    )
+    parser.add_argument(
+        "-c",
+        "--cost_func_type",
+        metavar="COST_FUNC_TYPE",
+        nargs="+",
+        type=str,
+        default=[],
+        help="Set the cost functions to be used " "for the given data.",
+    )
+    parser.add_argument(
+        "-rt",
+        "--runtime_metric",
+        metavar="RUNTIME_METRIC",
+        choices=[
+            "mean",
+            "minimum",
+            "maximum",
+            "first",
+            "median",
+            "harmonic",
+            "trim",
+        ],
+        type=str,
+        default="",
+        help="Set the metric for the runtime.",
+    )
 
     parser.add_argument(
         "--port",

fitbenchmarking/cli/tests/test_main.py

@@ -1,6 +1,7 @@
 """
 This file contains unit tests for the main CLI script
 """
+
 import inspect
 import os
 from pathlib import Path

fitbenchmarking/utils/exceptions.py

@@ -271,6 +271,7 @@ class FilePathError(FitBenchmarkException):
     """
     Indicates the filepath is invalid.
     """
+
     class_message = "The filepath is invalid."
     error_code = 25