construct_snp_labels
:- Ensure data gets melted first.
- Implement
rworkflows
- New exports:
get_palettes
list_namespace
plot_locus
:- pass up
subset_labels
arg.
- pass up
- Make
pals
an Import, and removeRColorBrewer
. - Fix
Can't combine ..1$Method <factor<2f980>> and ..4$Method <ordered<4e1b3>>.
error. - Get rid of
ggrepel: 7 unlabeled data points (too many overlaps). Consider increasing max.overlaps
warnings. - Fixed potential issue with getting top SNPs per Method in
construct_snp_labels
. - Fixed
colours encodes as numbers must be positive
errors. - Fix
dot_summary_plot
afterconstruct_snp_labels
updates.
plot_locus_multi
: New function to plot multi-GWAS/multi-ancestry results.get_transcripts_biotypes
: New exported function to help users determine available biotypes.get_transcripts
: new argumenttx_biotypes=
allows user to filter by biotypes. Passes up toplot_locus
.plot_locus
: changedqtl_prefixes
-->qtl_suffixes
to be consistent withmerge
naming strategy.- Export
snp_track_merged
. - Move functions from
echoplot
:ROADMAP_plot
and plotting subfunctions.XGR_plot
and plotting subfunctions.
transcript_model_track
: Handle when 0 transcripts are returned, without error.get_transcripts_biotypes
==>get_tx_biotypes
in all places.- Document all functions.
- Fix GHA: @master --> @v2
- Replace "PLOT::" with "echoplot::"
- Add Issues templates.
- Fix
slice_max
bug intranscript_model_track
.
- Removed
echotabix
as dep since these functions are now handled byechoannot
. - Updated GHA workflow.
- Nott2019 tracks working again.
- Added a
NEWS.md
file to track changes to the package.