CHANGELOG.md

Changelog

All notable changes to this project will be documented in this file. Dates are displayed in UTC.

Generated by auto-changelog.

v5.1.23

• updating generateSequenceData to pass annotation numbers e0a90fa

v5.1.22

17 June 2022

• adding window.tg_allowNonStandardGenbankTypes variable for easy control of allowing non standard genbank types - TeselaGen/openVectorEditor#831 86236b0

v5.1.21

17 June 2022

• adding allowNonStandardGenbankTypes option to tidyUpSequenceData/tidyUpAnnotation - TeselaGen/openVectorEditor#831 7debc6d

v5.1.20

15 June 2022

• adding option to filter off CDS translations to tidyUpSequenceData 0f9ffcf

v5.1.18

15 June 2022

v5.1.17

15 June 2022

• reverting reverse sequence string c6d714c

v5.1.16

19 May 2022

• Adding in a Reverse Function #197
• adding reverseSequenceString fn 3c4660b

v5.1.14

13 January 2022

• updating primer mapping to split primers above and below the sequence instead of mapping them all to be above ccab5ef

v5.1.13

20 December 2021

• updating to improve baseCalls handling with chromatogramData editing be73ee0
• adding a homepage link to package.json f1b706a

v5.1.12

11 November 2021

• adding in chromatogramData insert/delete/update handling 98c8279

v5.1.11

20 October 2021

• improving coloring of proteinAlphabet hydrophobicity scale 411576a

v5.1.10

19 October 2021

• fixing tidyUpAnnotation logic and adding a test 1d37492

v5.1.9

19 October 2021

• adding doNotProvideIdsForAnnotations flag for tidyUpSequencData; adding alternate colorByFamily colors to amino acids edad0ce

v5.1.8

13 October 2021

• updating npmignore and annotateSingleSeq export pattern a32306b

v5.1.7

13 October 2021

• adding an annotateSingleSeq function 02316fa

v5.1.6

23 September 2021

• updating deps; removing validate.io-nonnegative-integer-array e5e0f6d

v5.1.5

17 September 2021

• update aminoAcidToDegenerateDnaMap.js and add aminoAcidToDegenerateRnaMap.js #196
• CLN-32292: update aminoAcidToDegenerateDnaMap.js b5d0b49
• update 31e19e1

v5.1.4

16 August 2021

• updating getSequenceDataBetweenRange to properly handle annotations that overlap themselves d846f2d

v5.1.3

11 August 2021

• updating mapAnnotationsToRows to handle overlapsSelf flag 6e34bd6

v5.1.2

9 August 2021

• updating getSequenceDataBetweenRange to handle range.overlapsSelf flag 81bafbe
• Merge pull request #194 from TeselaGen/dependabot/npm_and_yarn/tar-4.4.15 0e2af20
• [Security] Bump tar from 4.4.8 to 4.4.15 9b7e9d0

v5.1.1

29 June 2021

• adding autoAnnotate and convertApELikeRegexToRegex 8027d0d
• Merge pull request #176 from TeselaGen/dependabot/npm_and_yarn/npm-check-5.9.2 40e0e6c
• Bump npm-check from 5.9.0 to 5.9.2 cb190b2

v5.0.2

17 March 2021

v5.0.1

15 March 2021

• [Security] Bump mixin-deep from 1.3.1 to 1.3.2 #27
• added ve-range-utils version with flipContainedRange bug fix...added … #10
• Aligningshortseqreads #9
• Added more feature types #8
• Added U to filterAminoAcidSequenceString #6
• Add option for to include stop codon #1
• fixing issue with location copying in getSequenceDataBetweenRange and adding tests; links TeselaGen/openVectorEditor#634 af6d514
• Merge pull request #154 from TeselaGen/dependabot/npm_and_yarn/elliptic-6.5.4 df7f203
• adding aliasedEnzymesByName and defaultEnzymesByName; removing old enzymeList a9fa562

1.0.8

2 March 2016

• added t as acceptable amino acid char 03c3dc4

1.0.7

2 March 2016

• updating gitignore, adding test file ea7e125
• added x as an acceptable AA char 443bcb2

1.0.6

1 March 2016

• removing api-checks, adding ids to annotations by default in tidyUpSequenceData d87b98a

1.0.5

10 February 2016

• fixing es6 incompatibilities b894843

1.0.4

10 February 2016

• Release 1.0.4 4277ae0

1.0.3

10 February 2016

• fixing tests, adding gitignore 96869cc
• Update package.json 3c4589b

1.0.2

10 February 2016

• moving to Teselagen's github afbc761
• fixing tests, adding gitignore fa359f4