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DESCRIPTION
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Package: nestor
Title: Network inference from Species counTs with missing actORs
Version: 1.0.0
Authors@R:
person(given = "Raphaelle",
family = "Momal",
role = c("aut", "cre"),
email = "rmomaleisenring@gmail.com",
comment = c(ORCID = "0000-0002-1550-4530"))
Description: Implements a variational method using an average on spanning trees to infer the conditional dependency structure from abundance data, while accounting for missing actors.
License: GPL-3 + file LICENSE
Encoding: UTF-8
LazyData: true
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.1.1
Imports:
MASS,
parallel,
ROCR,
dplyr,
tidyr,
mvtnorm,
PLNmodels,
sparsepca,
huge,
Matrix,
EMtree,
blockmodels,
rcdd,
ggplot2,
gridExtra,
magrittr,
tibble,
reshape2,
gmp,
stringr,
graphics,
mclust,
useful
Suggests:
covr,
testthat (>= 2.1.0),
knitr,
rmarkdown
Remotes: github::Rmomal/EMtree
VignetteBuilder: knitr