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extract-pdbs.md

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[[extract_pdbs]]

[[TOC]]

Algorithm Description

This app extracts poses from a silent file and exports them as a PDB file, based on the tag(s). The tag is written under the 'description' column (24th column) in the silent file, and has a format of 'result_xxxx'.

ROSETTA='path/to/rosetta'
silent_file_path='out.silent'
tags='result_0001 result_0002'

$ROSETTA/main/source/bin/extract_pdbs.linuxgccrelease -in:file:silent $silent_file_path -in:file:tags $tags

Options

General options

Flag Short Flag Description Type
-in:file:silent Input silent file String
-in:file:tags Tags of desired poses String