From f640de3b80742b0852ba042626b354173cded7be Mon Sep 17 00:00:00 2001 From: ASinanSaglam Date: Fri, 5 Aug 2022 22:53:30 -0400 Subject: [PATCH] version tick to 2.8.4 and changelog update --- bng2/CHANGES.txt | 12 ++++++++++++ bng2/VERSION | 2 +- 2 files changed, 13 insertions(+), 1 deletion(-) diff --git a/bng2/CHANGES.txt b/bng2/CHANGES.txt index a736b828..8ec1a22b 100644 --- a/bng2/CHANGES.txt +++ b/bng2/CHANGES.txt @@ -2,6 +2,18 @@ CHANGES to BioNetGen updated 28 September 2021 https://github.com/RuleWorld/bionetgen/ + +== BioNetGen-2.8.4== +'''''2022 June 22''''' + +== Minor changes == +* Bugfix to issue #174 where observables of the form `A==N.B==M` were accepted but incorrectly parsed. +These observables are no longer accepted and will produce an error. +* Bugfix to issue #180 where wildcard bonds in products could be broken, e.g. `A(b!+) -> A(b) + B(a)`. +This will now be detected, cause an error and quit. +* Bugfix to issue #189 where negative rate constants were accepted without warning. Rate constants +will be evaluated and if they are negative, they will produce a warning but won't quit. + == BioNetGen-2.8.3== '''''2022 June 22''''' diff --git a/bng2/VERSION b/bng2/VERSION index 9f8d8a91..2701a226 100644 --- a/bng2/VERSION +++ b/bng2/VERSION @@ -1 +1 @@ -2.8.3 +2.8.4