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eirene.yaml
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/
eirene.yaml
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---
install_repository_dependencies: true
install_resolver_dependencies: true
install_tool_dependencies: false
tools:
- name: recetox_aplcms_generate_feature_table
owner: recetox
tool_panel_section_label: Metabolomics
- name: recetox_aplcms_recover_weaker_signals
owner: recetox
tool_panel_section_label: Metabolomics
- name: recetox_aplcms_correct_time
owner: recetox
tool_panel_section_label: Metabolomics
- name: recetox_aplcms_compute_clusters
owner: recetox
tool_panel_section_label: Metabolomics
- name: recetox_aplcms_remove_noise
owner: recetox
tool_panel_section_label: Metabolomics
- name: recetox_aplcms_merge_known_table
owner: recetox
tool_panel_section_label: Metabolomics
- name: recetox_aplcms_compute_template
owner: recetox
tool_panel_section_label: Metabolomics
- name: recetox_aplcms_align_features
owner: recetox
tool_panel_section_label: Metabolomics
- name: rmassbank
owner: recetox
tool_panel_section_label: Metabolomics
- name: biotransformer
owner: recetox
tool_panel_section_label: Metabolomics
- name: msmetaenhancer
owner: recetox
tool_panel_section_label: Metabolomics
- name: riassigner
owner: recetox
tool_panel_section_label: Metabolomics
- name: ramclustr
owner: recetox
tool_panel_section_label: Metabolomics
- name: ramclustr_define_experiment
owner: recetox
tool_panel_section_label: Metabolomics
- name: recetox_xmsannotator_advanced
owner: recetox
tool_panel_section_label: Metabolomics
- name: matchms_convert
owner: recetox
tool_panel_section_label: Metabolomics
- name: matchms_add_key
owner: recetox
tool_panel_section_label: Metabolomics
- name: matchms_remove_key
owner: recetox
tool_panel_section_label: Metabolomics
- name: matchms_filtering
owner: recetox
tool_panel_section_label: Metabolomics
- name: matchms_remove_spectra
owner: recetox
tool_panel_section_label: Metabolomics
- name: matchms_fingerprint_similarity
owner: recetox
tool_panel_section_label: Metabolomics
- name: matchms_formatter
owner: recetox
tool_panel_section_label: Metabolomics
- name: matchms_metadata_export
owner: recetox
tool_panel_section_label: Metabolomics
- name: matchms_metadata_match
owner: recetox
tool_panel_section_label: Metabolomics
- name: matchms_networking
owner: recetox
tool_panel_section_label: Metabolomics
- name: matchms_similarity
owner: recetox
tool_panel_section_label: Metabolomics
- name: matchms_spectral_similarity
owner: recetox
tool_panel_section_label: Metabolomics
- name: matchms_split
owner: recetox
tool_panel_section_label: Metabolomics
- name: matchms_subsetting
owner: recetox
tool_panel_section_label: Metabolomics
- name: matchms_metadata_merge
owner: recetox
tool_panel_section_label: Metabolomics
- name: waveica
owner: recetox
tool_panel_section_label: Metabolomics
- name: xtb_molecular_optimization
owner: recetox
tool_panel_section_label: ChemicalToolBox
- name: rem_complex
owner: recetox
tool_panel_section_label: ChemicalToolBox
- name: recetox_msfinder
owner: recetox
tool_panel_section_label: Metabolomics
- name: qcxms_neutral_run
owner: recetox
tool_panel_section_label: ChemicalToolBox
- name: qcxms_production_run
owner: recetox
tool_panel_section_label: ChemicalToolBox
- name: qcxms_getres
owner: recetox
tool_panel_section_label: ChemicalToolBox
- name: use_theoretical_mz_annotations
owner: recetox
tool_panel_section_label: Metabolomics
- name: rename_annotated_feature
owner: recetox
tool_panel_section_label: Metabolomics
- name: assign_ri_from_comment
owner: recetox
tool_panel_section_label: Metabolomics
- name: isolib
owner: recetox
tool_panel_section_label: Metabolomics
- name: gc_derivatization
owner: recetox
tool_panel_section_label: Metabolomics
- name: xcms_plot_raw
owner: workflow4metabolomics
tool_panel_section_label: Metabolomics
- name: xcms_plot_eic
owner: workflow4metabolomics
tool_panel_section_label: Metabolomics
- name: spec2vec_similarity
owner: recetox
tool_panel_section_label: Metabolomics
- name: spec2vec_training
owner: recetox
tool_panel_section_label: Metabolomics
- name: mfassignr_snplot
owner: recetox
tool_panel_section_label: Metabolomics
- name: mfassignr_histnoise
owner: recetox
tool_panel_section_label: Metabolomics
- name: mfassignr_kmdnoise
owner: recetox
tool_panel_section_label: Metabolomics
- name: mfassignr_isofiltr
owner: recetox
tool_panel_section_label: Metabolomics
- name: mfassignr_mfassign
owner: recetox
tool_panel_section_label: Metabolomics
- name: mfassignr_mfassigncho
owner: recetox
tool_panel_section_label: Metabolomics
- name: mfassignr_recal
owner: recetox
tool_panel_section_label: Metabolomics
- name: mfassignr_recallist
owner: recetox
tool_panel_section_label: Metabolomics
- name: rcx_tk
owner: recetox
tool_panel_section_label: Metabolomics