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return correct variable type/metadata in map_symbolics_ident #130

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merged 12 commits into from
Jul 19, 2023

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paulflang
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If an initialAssignment contains a species instead of a parameter, this species needs to be a function of t such that it can be substituted with the defaults.

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codecov bot commented Jul 14, 2023

Codecov Report

Merging #130 (8baab5f) into main (903ec91) will decrease coverage by 0.17%.
The diff coverage is 90.47%.

@@            Coverage Diff             @@
##             main     #130      +/-   ##
==========================================
- Coverage   94.11%   93.94%   -0.17%     
==========================================
  Files           6        7       +1     
  Lines         323      347      +24     
==========================================
+ Hits          304      326      +22     
- Misses         19       21       +2     
Impacted Files Coverage Δ
src/SBMLToolkit.jl 100.00% <ø> (ø)
src/utils.jl 93.22% <86.66%> (-1.66%) ⬇️
src/events.jl 96.15% <100.00%> (ø)
src/reactions.jl 97.45% <100.00%> (ø)
src/rules.jl 95.12% <100.00%> (ø)
src/systems.jl 93.61% <100.00%> (+0.21%) ⬆️

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@paulflang paulflang marked this pull request as ready for review July 18, 2023 21:42
src/utils.jl Outdated
Comment on lines 10 to 13
# map_symbolics_ident(x) = begin
# sym = Symbol(x.id)
# first(@species $sym)
# end
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is this still needed?

@paulflang paulflang merged commit 76c91e9 into main Jul 19, 2023
8 of 10 checks passed
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2 participants