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codons_distances.json
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{
"GAG": {
"GCG": 0.8,
"AAG": 0.8,
"GGG": 0.8,
"GAC": 0.8,
"TAG": 0.8,
"GTG": 0.8,
"CAG": 0.8,
"GAT": 0.8,
"GAA": 0.8,
"AAC": 0.6,
"AGC": 0.6,
"TAT": 0.6,
"CTG": 0.6,
"ATG": 0.6,
"TCG": 0.6,
"AAT": 0.6,
"CGA": 0.6,
"GCC": 0.6,
"TAC": 0.6,
"TGA": 0.6,
"GGA": 0.6,
"TAA": 0.6,
"CAT": 0.6,
"GGT": 0.6,
"AGA": 0.6,
"GCA": 0.6,
"CCG": 0.6,
"ACG": 0.6,
"CGG": 0.6,
"TGG": 0.6,
"GCT": 0.6,
"CAC": 0.6,
"AGG": 0.6,
"GTA": 0.6,
"TTG": 0.6,
"CAA": 0.6,
"AGT": 0.6,
"GGC": 0.6,
"GTT": 0.6,
"GTC": 0.6,
"AAA": 0.6,
"TGC": 0.4,
"CTC": 0.4,
"CCA": 0.4,
"CCC": 0.4,
"TGT": 0.4,
"ATA": 0.4,
"ATT": 0.4,
"TTT": 0.4,
"TCC": 0.4,
"CTA": 0.4,
"ACT": 0.4,
"ATC": 0.4,
"CGT": 0.4,
"TCA": 0.4,
"ACA": 0.4,
"TCT": 0.4,
"CTT": 0.4,
"TTA": 0.4,
"CGC": 0.4,
"TTC": 0.4,
"CCT": 0.4,
"ACC": 0.4
},
"GCG": {
"GAG": 0.8,
"GGG": 0.8,
"TCG": 0.8,
"GCC": 0.8,
"GTG": 0.8,
"GCA": 0.8,
"CCG": 0.8,
"ACG": 0.8,
"GCT": 0.8,
"TGC": 0.6,
"AAG": 0.6,
"AGC": 0.6,
"CTG": 0.6,
"GAC": 0.6,
"ATG": 0.6,
"CGA": 0.6,
"CCA": 0.6,
"CCC": 0.6,
"GGA": 0.6,
"TAG": 0.6,
"TCC": 0.6,
"ACT": 0.6,
"GGT": 0.6,
"CGT": 0.6,
"CAG": 0.6,
"GAT": 0.6,
"CGG": 0.6,
"TCA": 0.6,
"TGG": 0.6,
"ACA": 0.6,
"GAA": 0.6,
"TCT": 0.6,
"AGG": 0.6,
"GTA": 0.6,
"TTG": 0.6,
"GGC": 0.6,
"CGC": 0.6,
"GTT": 0.6,
"GTC": 0.6,
"CCT": 0.6,
"ACC": 0.6,
"CTC": 0.4,
"AAC": 0.4,
"TAT": 0.4,
"AAT": 0.4,
"TGT": 0.4,
"ATA": 0.4,
"TAC": 0.4,
"ATT": 0.4,
"TGA": 0.4,
"TTT": 0.4,
"CTA": 0.4,
"TAA": 0.4,
"CAT": 0.4,
"AGA": 0.4,
"ATC": 0.4,
"CTT": 0.4,
"CAC": 0.4,
"TTA": 0.4,
"CAA": 0.4,
"AGT": 0.4,
"TTC": 0.4,
"AAA": 0.4
},
"TGC": {
"AGC": 0.8,
"TGT": 0.8,
"TAC": 0.8,
"TGA": 0.8,
"TCC": 0.8,
"TGG": 0.8,
"GGC": 0.8,
"CGC": 0.8,
"TTC": 0.8,
"GCG": 0.6,
"CTC": 0.6,
"AAC": 0.6,
"TAT": 0.6,
"GGG": 0.6,
"CTG": 0.6,
"GAC": 0.6,
"ATG": 0.6,
"TCG": 0.6,
"CGA": 0.6,
"CCC": 0.6,
"GCC": 0.6,
"TTT": 0.6,
"GGA": 0.6,
"TAG": 0.6,
"TAA": 0.6,
"GTG": 0.6,
"GGT": 0.6,
"AGA": 0.6,
"GCA": 0.6,
"ATC": 0.6,
"CGT": 0.6,
"CGG": 0.6,
"TCA": 0.6,
"TCT": 0.6,
"GCT": 0.6,
"CAC": 0.6,
"TTA": 0.6,
"AGG": 0.6,
"TTG": 0.6,
"AGT": 0.6,
"GTC": 0.6,
"ACC": 0.6,
"GAG": 0.4,
"AAG": 0.4,
"AAT": 0.4,
"CCA": 0.4,
"ATA": 0.4,
"ATT": 0.4,
"CTA": 0.4,
"ACT": 0.4,
"CAT": 0.4,
"CAG": 0.4,
"CCG": 0.4,
"GAT": 0.4,
"ACG": 0.4,
"ACA": 0.4,
"GAA": 0.4,
"CTT": 0.4,
"GTA": 0.4,
"CAA": 0.4,
"GTT": 0.4,
"AAA": 0.4,
"CCT": 0.4
},
"AAG": {
"GAG": 0.8,
"AAC": 0.8,
"ATG": 0.8,
"AAT": 0.8,
"TAG": 0.8,
"CAG": 0.8,
"ACG": 0.8,
"AGG": 0.8,
"AAA": 0.8,
"GCG": 0.6,
"AGC": 0.6,
"TAT": 0.6,
"GGG": 0.6,
"CTG": 0.6,
"GAC": 0.6,
"TCG": 0.6,
"ATA": 0.6,
"TAC": 0.6,
"ATT": 0.6,
"TAA": 0.6,
"GTG": 0.6,
"ACT": 0.6,
"CAT": 0.6,
"AGA": 0.6,
"ATC": 0.6,
"CCG": 0.6,
"GAT": 0.6,
"CGG": 0.6,
"TGG": 0.6,
"ACA": 0.6,
"GAA": 0.6,
"CAC": 0.6,
"TTG": 0.6,
"CAA": 0.6,
"AGT": 0.6,
"ACC": 0.6,
"TGC": 0.4,
"CTC": 0.4,
"CGA": 0.4,
"CCA": 0.4,
"CCC": 0.4,
"TGT": 0.4,
"GCC": 0.4,
"TGA": 0.4,
"TTT": 0.4,
"GGA": 0.4,
"TCC": 0.4,
"CTA": 0.4,
"GGT": 0.4,
"GCA": 0.4,
"CGT": 0.4,
"TCA": 0.4,
"TCT": 0.4,
"CTT": 0.4,
"GCT": 0.4,
"TTA": 0.4,
"GTA": 0.4,
"GGC": 0.4,
"CGC": 0.4,
"GTT": 0.4,
"GTC": 0.4,
"TTC": 0.4,
"CCT": 0.4
},
"CTC": {
"CTG": 0.8,
"CCC": 0.8,
"CTA": 0.8,
"ATC": 0.8,
"CTT": 0.8,
"CAC": 0.8,
"CGC": 0.8,
"GTC": 0.8,
"TTC": 0.8,
"TGC": 0.6,
"AAC": 0.6,
"AGC": 0.6,
"GAC": 0.6,
"ATG": 0.6,
"TCG": 0.6,
"CGA": 0.6,
"CCA": 0.6,
"ATA": 0.6,
"GCC": 0.6,
"TAC": 0.6,
"ATT": 0.6,
"TTT": 0.6,
"TCC": 0.6,
"GTG": 0.6,
"ACT": 0.6,
"CAT": 0.6,
"CGT": 0.6,
"CAG": 0.6,
"CCG": 0.6,
"CGG": 0.6,
"TCA": 0.6,
"TCT": 0.6,
"GCT": 0.6,
"TTA": 0.6,
"GTA": 0.6,
"TTG": 0.6,
"CAA": 0.6,
"GGC": 0.6,
"GTT": 0.6,
"CCT": 0.6,
"ACC": 0.6,
"GAG": 0.4,
"GCG": 0.4,
"AAG": 0.4,
"TAT": 0.4,
"GGG": 0.4,
"AAT": 0.4,
"TGT": 0.4,
"TGA": 0.4,
"GGA": 0.4,
"TAG": 0.4,
"TAA": 0.4,
"GGT": 0.4,
"AGA": 0.4,
"GCA": 0.4,
"GAT": 0.4,
"ACG": 0.4,
"TGG": 0.4,
"ACA": 0.4,
"GAA": 0.4,
"AGG": 0.4,
"AGT": 0.4,
"AAA": 0.4
},
"AAC": {
"AAG": 0.8,
"AGC": 0.8,
"GAC": 0.8,
"AAT": 0.8,
"TAC": 0.8,
"ATC": 0.8,
"CAC": 0.8,
"AAA": 0.8,
"ACC": 0.8,
"GAG": 0.6,
"TGC": 0.6,
"CTC": 0.6,
"TAT": 0.6,
"ATG": 0.6,
"CCC": 0.6,
"ATA": 0.6,
"GCC": 0.6,
"ATT": 0.6,
"TAG": 0.6,
"TCC": 0.6,
"TAA": 0.6,
"ACT": 0.6,
"CAT": 0.6,
"AGA": 0.6,
"CAG": 0.6,
"GAT": 0.6,
"ACG": 0.6,
"ACA": 0.6,
"GAA": 0.6,
"AGG": 0.6,
"CAA": 0.6,
"AGT": 0.6,
"GGC": 0.6,
"CGC": 0.6,
"GTC": 0.6,
"TTC": 0.6,
"GCG": 0.4,
"GGG": 0.4,
"CTG": 0.4,
"TCG": 0.4,
"CGA": 0.4,
"CCA": 0.4,
"TGT": 0.4,
"TGA": 0.4,
"TTT": 0.4,
"GGA": 0.4,
"CTA": 0.4,
"GTG": 0.4,
"GGT": 0.4,
"GCA": 0.4,
"CGT": 0.4,
"CCG": 0.4,
"CGG": 0.4,
"TCA": 0.4,
"TGG": 0.4,
"TCT": 0.4,
"CTT": 0.4,
"GCT": 0.4,
"TTA": 0.4,
"GTA": 0.4,
"TTG": 0.4,
"GTT": 0.4,
"CCT": 0.4
},
"AGC": {
"TGC": 0.8,
"AAC": 0.8,
"AGA": 0.8,
"ATC": 0.8,
"AGG": 0.8,
"AGT": 0.8,
"GGC": 0.8,
"CGC": 0.8,
"ACC": 0.8,
"GAG": 0.6,
"GCG": 0.6,
"AAG": 0.6,
"CTC": 0.6,
"GGG": 0.6,
"GAC": 0.6,
"ATG": 0.6,
"AAT": 0.6,
"CGA": 0.6,
"CCC": 0.6,
"TGT": 0.6,
"ATA": 0.6,
"GCC": 0.6,
"TAC": 0.6,
"ATT": 0.6,
"TGA": 0.6,
"GGA": 0.6,
"TAG": 0.6,
"TCC": 0.6,
"ACT": 0.6,
"GGT": 0.6,
"GCA": 0.6,
"CGT": 0.6,
"CAG": 0.6,
"ACG": 0.6,
"CGG": 0.6,
"TGG": 0.6,
"ACA": 0.6,
"GCT": 0.6,
"CAC": 0.6,
"GTC": 0.6,
"TTC": 0.6,
"AAA": 0.6,
"TAT": 0.4,
"CTG": 0.4,
"TCG": 0.4,
"CCA": 0.4,
"TTT": 0.4,
"CTA": 0.4,
"TAA": 0.4,
"GTG": 0.4,
"CAT": 0.4,
"CCG": 0.4,
"GAT": 0.4,
"TCA": 0.4,
"GAA": 0.4,
"TCT": 0.4,
"CTT": 0.4,
"TTA": 0.4,
"GTA": 0.4,
"TTG": 0.4,
"CAA": 0.4,
"GTT": 0.4,
"CCT": 0.4
},
"TAT": {
"AAT": 0.8,
"TGT": 0.8,
"TAC": 0.8,
"TTT": 0.8,
"TAG": 0.8,
"TAA": 0.8,
"CAT": 0.8,
"GAT": 0.8,
"TCT": 0.8,
"GAG": 0.6,
"TGC": 0.6,
"AAG": 0.6,
"AAC": 0.6,
"GAC": 0.6,
"ATG": 0.6,
"TCG": 0.6,
"ATA": 0.6,
"ATT": 0.6,
"TGA": 0.6,
"TCC": 0.6,
"CTA": 0.6,
"ACT": 0.6,
"GGT": 0.6,
"ATC": 0.6,
"CGT": 0.6,
"CAG": 0.6,
"TCA": 0.6,
"TGG": 0.6,
"GAA": 0.6,
"CTT": 0.6,
"GCT": 0.6,
"CAC": 0.6,
"TTA": 0.6,
"GTA": 0.6,
"TTG": 0.6,
"CAA": 0.6,
"AGT": 0.6,
"GTT": 0.6,
"TTC": 0.6,
"AAA": 0.6,
"CCT": 0.6,
"GCG": 0.4,
"CTC": 0.4,
"AGC": 0.4,
"GGG": 0.4,
"CTG": 0.4,
"CGA": 0.4,
"CCA": 0.4,
"CCC": 0.4,
"GCC": 0.4,
"GGA": 0.4,
"GTG": 0.4,
"AGA": 0.4,
"GCA": 0.4,
"CCG": 0.4,
"ACG": 0.4,
"CGG": 0.4,
"ACA": 0.4,
"AGG": 0.4,
"GGC": 0.4,
"CGC": 0.4,
"GTC": 0.4,
"ACC": 0.4
},
"GGG": {
"GAG": 0.8,
"GCG": 0.8,
"GGA": 0.8,
"GTG": 0.8,
"GGT": 0.8,
"CGG": 0.8,
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