concoct.rb

# Documentation: http://docs.brew.sh/Formula-Cookbook.html
#                http://www.rubydoc.info/github/Homebrew/brew/master/Formula
# PLEASE REMOVE ALL GENERATED COMMENTS BEFORE SUBMITTING YOUR PULL REQUEST!

class Concoct < Formula
  desc "Clustering cONtigs with COverage and ComposiTion"
  homepage ""
  url "https://github.com/BinPro/CONCOCT/archive/0.4.0.tar.gz"
  sha256 "c00e6e50ddd76f54336a7fbd0067ea42315a976842c0605c552dfbeeaed599b0"

  # depends_on "cmake" => :build
  depends_on "python"

  def install
    ENV["LANG"] = "en_US.UTF-8"
    version = Language::Python.major_minor_version "python3"
    ENV.prepend_create_path "PYTHONPATH", libexec/"lib/python#{version}/site-packages"
    ENV.prepend_create_path "PYTHONPATH", libexec/"vendor/lib/python#{version}/site-packages"
    ENV.prepend_create_path "PYTHONPATH", "#{HOMEBREW_PREFIX}/lib/python#{version}/site-packages"

    system "python", "setup.py", "install"

    # Install supplementary scripts
    libexec.install Dir["scripts"]
  end

  test do
    # `test do` will create, run in and delete a temporary directory.
    #
    # This test will fail and we won't accept that! It's enough to just replace
    # "false" with the main program this formula installs, but it'd be nice if you
    # were more thorough. Run the test with `brew test CONCOCT`. Options passed
    # to `brew install` such as `--HEAD` also need to be provided to `brew test`.
    #
    # The installed folder is not in the path, so use the entire path to any
    # executables being tested: `system "#{bin}/program", "do", "something"`.
    system "false"
  end
end