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Makefile
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Makefile
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.PHONY: mcmc joint analysis-mcmc
mcmc-joint-geese-ver2: parameter-estimates/mcmc-joint-geese-ver2.R
R CMD BATCH --vanilla parameter-estimates/mcmc-joint-geese-ver2.R \
parameter-estimates/mcmc-joint-geese-ver2.Rout &
mcmc-joint-aphylo: parameter-estimates/mcmc-joint-aphylo.R
R CMD BATCH --vanilla parameter-estimates/mcmc-joint-aphylo.R \
parameter-estimates/mcmc-joint-aphylo.Rout &
mcmc-unif-prior-curated: parameter-estimates/mcmc-unif-prior-curated.R
R CMD BATCH --vanilla parameter-estimates/mcmc-unif-prior-curated.R \
parameter-estimates/mcmc-unif-prior-curated-v2.Rout &
# analysis-mcmc:
# Rscript --vanilla -e \
# 'source("fig/mcmc-analysis.R", echo = TRUE)'
# analysis-mcmc-unif:
# Rscript --vanilla -e \
# 'source("fig/mcmc-analysis-uniform-prior.R", echo = TRUE)'
# analysis-joint:
# Rscript --vanilla -e \
# 'source("fig/mcmc-joint-analysis.R", echo = TRUE)'
.PHONY: ls
ls:
ls -alt parameter-estimates/mcmc-PTH*.rds | wc -l ; \
ls -alt parameter-estimates/mcmc-unif*.rds | wc -l