Update 20241001_FI.md

Author: jke000

notes/20241001_FI.md

@@ -164,8 +164,15 @@ The .idx files were created before the search so the reported search times and
   The .idx creation step took 7:14 to generate and
   consumed 52 GB of RAM.
   The corresponding standard Comet search took 40:46.
-- Human forward + reverse sequences, *no enzyme constraint*, 16M variable mod,
-  peptide length range 7 to 15 uses 49 GB of RAM and completes in 5 minutes
-  and 30 seconds.  The corresponding standard Comet search
-  took 20 minutes and 5 seconds.  It's worth noting that the .idx
-  creation step consumed 106 RAM and took 12 minutes 40 seconds.
+- Human forward + reverse sequences, *no enzyme constraint*, no variable mods,
+  peptide length range 7 to 15 uses 45 GB of RAM and completes in 4:45.
+  Most of that time is for the fragment ion index creation as the actual
+  search took just 0:36.
+  The corresponding standard Comet search took 15:48.
+  It's worth noting that the .idx creation step consumed a whopping
+  105 RAM and took 11:42.
+- Same human forward + reverse sequences, *no enzyme constraint*,
+  peptide length range 7 to 15 but adding in 16M variable mod
+  uses 49 GB of RAM and completes in 5:30.
+  The corresponding standard Comet search took 20:05.
+  The .idx creation step consumed 106 RAM and took 12:40.