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THIS REPO IS 🚧 UNDER CONSTRUCTION 🚧 and NOT Used in ANY production CODE

Nextflow Conversion

GpiAnchorPrediction

flowchart TD
    p0((Channel.fromPath))
    p1[GpiAnchorPrediction:runpredGpi]
    p2(( ))
    p0 -->|seqs| p1
    p1 --> p2
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Get Started

  • Install Nextflow

    curl https://get.nextflow.io | bash

  • Run the script

    nextflow run VEuPathDB/GpiAnchorPrediction -with-trace -c <config_file> -r main

Description of nextflow configuration parameters:

param value type description
inputFilePath string Path to the input fasta file.
outputDir string Where you would the the output file to be stored.
outputFormat string <json,gff3> Desired output format.