Update github actions to latest release versions

Author: amrit110

.github/workflows/code_checks.yml

@@ -26,10 +26,10 @@ jobs:
   run-code-check:
     runs-on: ubuntu-latest
     steps:
-      - uses: actions/checkout@v3
+      - uses: actions/checkout@v4.1.1
       - name: Install poetry
         run: python3 -m pip install --upgrade pip && python3 -m pip install poetry
-      - uses: actions/setup-python@v4.7.1
+      - uses: actions/setup-python@v5.0.0
         with:
           python-version: '3.10'
           cache: 'poetry'

.github/workflows/docker.yml

@@ -22,7 +22,7 @@ jobs:
     runs-on: ubuntu-latest
     steps:
       - name: Checkout repository
-        uses: actions/checkout@v3
+        uses: actions/checkout@v4.1.1
 
       - name: Log in to Docker Hub
         uses: docker/login-action@f4ef78c080cd8ba55a85445d5b36e214a81df20a

.github/workflows/docs_build.yml

@@ -25,7 +25,7 @@ jobs:
           submodules: 'true'
       - name: Install dependencies, build docs and coverage report
         run: python3 -m pip install --upgrade pip && python3 -m pip install poetry
-      - uses: actions/setup-python@v4.7.1
+      - uses: actions/setup-python@v5.0.0
         with:
           python-version: '3.10'
           cache: 'poetry'
@@ -41,17 +41,17 @@ jobs:
           cd docs && rm -rf source/reference/api/_autosummary && make html
           cd .. && coverage run -m pytest -m "not integration_test" && coverage xml && coverage report -m
       - name: Upload coverage to Codecov
-        uses: Wandalen/wretry.action@v1.0.36
+        uses: Wandalen/wretry.action@v1.4.4
         with:
-          action: codecov/codecov-action@v3.1.3
+          action: codecov/codecov-action@v4.0.1
           with: |
             token: ${{ secrets.CODECOV_TOKEN }}
             file: ./coverage.xml
             name: codecov-umbrella
             fail_ci_if_error: true
           attempt_limit: 5
           attempt_delay: 30000
-      - uses: actions/setup-node@v3
+      - uses: actions/setup-node@v4.0.2
         with:
           node-version: 18
           cache: yarn

.github/workflows/docs_deploy.yml

@@ -23,12 +23,12 @@ jobs:
   deploy:
     runs-on: [self-hosted, db, gpu]
     steps:
-      - uses: actions/checkout@v3
+      - uses: actions/checkout@v4.1.1
         with:
           submodules: 'true'
       - name: Install dependencies, build docs and coverage report
         run: python3 -m pip install --upgrade pip && python3 -m pip install poetry
-      - uses: actions/setup-python@v4.7.1
+      - uses: actions/setup-python@v5.0.0
         with:
           python-version: '3.10'
           cache: 'poetry'
@@ -43,17 +43,17 @@ jobs:
           cd docs && rm -rf source/reference/api/_autosummary && make html
           cd .. && coverage run -m pytest -m "not integration_test" && coverage xml && coverage report -m
       - name: Upload coverage to Codecov
-        uses: Wandalen/wretry.action@v1.0.36
+        uses: Wandalen/wretry.action@v1.4.4
         with:
-          action: codecov/codecov-action@v3.1.3
+          action: codecov/codecov-action@v4.0.1
           with: |
             token: ${{ secrets.CODECOV_TOKEN }}
             file: ./coverage.xml
             name: codecov-umbrella
             fail_ci_if_error: true
           attempt_limit: 5
           attempt_delay: 30000
-      - uses: actions/setup-node@v3
+      - uses: actions/setup-node@v4.0.2
         with:
           node-version: 18
           cache: yarn
@@ -65,7 +65,7 @@ jobs:
           yarn build
           cp -r ../build/html build/api
       - name: Deploy to GitHub Pages
-        uses: peaceiris/actions-gh-pages@v3
+        uses: peaceiris/actions-gh-pages@v3.9.3
         with:
           github_token: ${{ secrets.GITHUB_TOKEN }}
           publish_branch: github_pages

.github/workflows/integration_tests.yml

@@ -38,10 +38,10 @@ jobs:
   integration-tests:
     runs-on: [self-hosted, gpu, db]
     steps:
-      - uses: actions/checkout@v3
+      - uses: actions/checkout@v4.1.1
       - name: Install poetry
         run: pip install poetry
-      - uses: actions/setup-python@v4.7.1
+      - uses: actions/setup-python@v5.0.0
         with:
           python-version: '3.10'
       - name: Install dependencies and check code
@@ -54,9 +54,9 @@ jobs:
           env MPICC=/opt/openmpi-4.1.5/bin/mpicc poetry install --with docs,dev,test --all-extras
           coverage run -m pytest -m integration_test && coverage xml && coverage report -m
       - name: Upload coverage to Codecov
-        uses: Wandalen/wretry.action@v1.0.36
+        uses: Wandalen/wretry.action@v1.4.4
         with:
-          action: codecov/codecov-action@v3.1.3
+          action: codecov/codecov-action@v4.0.1
           with: |
             token: ${{ secrets.CODECOV_TOKEN }}
             file: ./coverage.xml

.github/workflows/package.yml

@@ -26,10 +26,10 @@ jobs:
   base-package-install-check:
     runs-on: ubuntu-latest
     steps:
-      - uses: actions/checkout@v3
+      - uses: actions/checkout@v4.1.1
       - name: Install pip
         run: python3 -m pip install --upgrade pip
-      - uses: actions/setup-python@v4.7.1
+      - uses: actions/setup-python@v5.0.0
         with:
           python-version: '3.10'
       - name: Install package and test import

.github/workflows/publish.yml

@@ -12,10 +12,10 @@ jobs:
         run: |
           sudo apt-get update
           sudo apt-get install libcurl4-openssl-dev libssl-dev
-      - uses: actions/checkout@v3
+      - uses: actions/checkout@v4.1.1
       - name: Install poetry
         run: python3 -m pip install --upgrade pip && python3 -m pip install poetry
-      - uses: actions/setup-python@v4.7.1
+      - uses: actions/setup-python@v5.0.0
         with:
           python-version: '3.10'
       - name: Build package

pyproject.toml

@@ -184,7 +184,6 @@ extra_checks = true
 include = ["*.py", "pyproject.toml", "*.ipynb"]
 line-length = 88
 exclude = [
-    "use_cases",
     "nbs",
 ]