From f0e3897fa1521b6a182b630f4b7b2a32631d3d7f Mon Sep 17 00:00:00 2001 From: Kieran Reynolds Date: Fri, 3 Nov 2023 10:44:40 +0000 Subject: [PATCH] Add missing arguments to unitas in __main__ --- hlsmallrna/__main__.py | 4 +++- 1 file changed, 3 insertions(+), 1 deletion(-) diff --git a/hlsmallrna/__main__.py b/hlsmallrna/__main__.py index 9f8bbfd..d4cbca3 100644 --- a/hlsmallrna/__main__.py +++ b/hlsmallrna/__main__.py @@ -365,11 +365,13 @@ def get_command_args(name): if out_code is not None: return - + unitas_command( os.path.join(get_config_key('general', 'output_directory'), 'binned_rna'), get_command_args('species'), get_command_args('refseq'), + get_command_args('cds'), + get_command_args('unspliced_transcriptome'), num_threads, get_command_args('quiet') )