Pipeline used for genetic analyses of Dutch IBD samples using the Illumina Global Screening array
Dutch IBD PSI: genotype-phenotype
All IBD patients from 8 Dutch University Medical Centers are genotyped using the Illumina Global Screening Array. Detailed phenotypic information is available.
Many credits go to Stepan Ripke for developing and maintaing his Ricopili pipeline, Will Rayner for his pre- and post-imputation checking scripts and Arnau Vich Vila for his ongoing help.