Makefile

-include *.mk

WS_VERSION ?= $(shell cat wormbase.conf | sed -rn 's|wormbase_release.*(WS[0-9]+).*|\1|p')
LOWER_WS_VERSION ?= $(shell echo ${WS_VERSION} | tr A-Z a-z)
CATALYST_PORT ?= 5000
WEBPACK_SERVER_PORT ?= 3000

export GOOGLE_CLIENT_ID=$(shell cat credentials/google/client_id.txt)
export GOOGLE_CLIENT_SECRET=$(shell cat credentials/google/client_secret.txt)
export GITHUB_TOKEN=$(shell cat credentials/github_token.txt)
export JWT_SECRET="$(shell cat credentials/jwt_secret.txt)"

export COMPOSE_PROJECT_NAME = "${USER}_$(shell pwd -P | xargs  basename)"

export ACEDB_HOST ?= acedb
export ACEDB_HOST_STAND_ALONE ?= 10.0.1.252

.PHONY: bare-dev-start
bare-dev-start:
	./script/wormbase_server.pl -p $(CATALYST_PORT) -d -r

.PHONY: bare-starman-start
bare-starman-start:
	./script/wormbase-daemon.sh

.PHONY: env
env:
	docker build -t wormbase/website-env -f docker/Dockerfile.env .

.PHONY: dev-start
dev-start:
	docker run -it \
		-v ${PWD}:/usr/local/wormbase/website \
		-v /usr/local/wormbase/website-shared-files/html:/usr/local/wormbase/website-shared-files/html \
		-v /usr/local/wormbase/services:/usr/local/wormbase/services \
		-v /usr/local/wormbase/databases:/usr/local/wormbase/databases \
		--network=wb-network \
		--init \
		-p ${CATALYST_PORT}:5000 \
		-e ACEDB_HOST=$(ACEDB_HOST) \
		-e AWS_ACCESS_KEY_ID \
		-e AWS_SECRET_ACCESS_KEY \
		-e GOOGLE_CLIENT_ID=$(GOOGLE_CLIENT_ID) \
		-e GOOGLE_CLIENT_SECRET=$(GOOGLE_CLIENT_SECRET) \
		-e GITHUB_TOKEN=$(GITHUB_TOKEN) \
		-e JWT_SECRET=$(JWT_SECRET) \
		wormbase/website-env \
		perl ./script/wormbase_server.pl -p 5000 -r -d


.PHONY: env-bash
env-bash:
	docker run -it \
		-v ${PWD}:/usr/local/wormbase/website \
		-v /usr/local/wormbase/website-shared-files/html:/usr/local/wormbase/website-shared-files/html \
		-v /usr/local/wormbase/services:/usr/local/wormbase/services \
		-v /usr/local/wormbase/databases:/usr/local/wormbase/databases \
		--network=wb-network \
		-p ${CATALYST_PORT}:5000 \
		-e ACEDB_HOST=$(ACEDB_HOST) \
		-e AWS_ACCESS_KEY_ID \
		-e AWS_SECRET_ACCESS_KEY \
		-e GOOGLE_CLIENT_ID=$(GOOGLE_CLIENT_ID) \
		-e GOOGLE_CLIENT_SECRET=$(GOOGLE_CLIENT_SECRET) \
		-e GITHUB_TOKEN=$(GITHUB_TOKEN) \
		-e JWT_SECRET=$(JWT_SECRET) \
		wormbase/website-env \
		/bin/bash


.PHONY: aws-ecr-login
aws-ecr-login:
	aws ecr get-login --no-include-email --region us-east-1 | sh

.PHONY: build
build: aws-ecr-login
	(cd client/ && yarn install --frozen-lockfile && yarn run build)  # build JS and CSS
	docker build -t wormbase/website -f docker/Dockerfile .

.PHONY: build-start
build-start:
	docker run -it \
		-v /usr/local/wormbase/website-shared-files/html:/usr/local/wormbase/website-shared-files/html \
		-v /usr/local/wormbase/services:/usr/local/wormbase/services \
		-v /usr/local/wormbase/databases:/usr/local/wormbase/databases \
		-v ${PWD}/logs:/usr/local/wormbase/website/logs \
		--network=wb-network \
		--init \
		-p ${CATALYST_PORT}:5000 \
		-e ACEDB_HOST=$(ACEDB_HOST) \
		-e AWS_ACCESS_KEY_ID \
		-e AWS_SECRET_ACCESS_KEY \
		-e GOOGLE_CLIENT_ID=$(GOOGLE_CLIENT_ID) \
		-e GOOGLE_CLIENT_SECRET=$(GOOGLE_CLIENT_SECRET) \
		-e GITHUB_TOKEN=$(GITHUB_TOKEN) \
		-e JWT_SECRET=$(JWT_SECRET) \
		wormbase/website

.PHONY: build-bash
build-bash:
	docker run -it \
		--entrypoint /bin/bash \
		-v /usr/local/wormbase/website-shared-files/html:/usr/local/wormbase/website-shared-files/html \
		-v /usr/local/wormbase/services:/usr/local/wormbase/services \
		-v /usr/local/wormbase/databases:/usr/local/wormbase/databases \
		-v ${PWD}/logs:/usr/local/wormbase/website/logs \
		--network=wb-network \
		-p ${CATALYST_PORT}:5000 \
		-e ACEDB_HOST=$(ACEDB_HOST) \
		-e AWS_ACCESS_KEY_ID \
		-e AWS_SECRET_ACCESS_KEY \
		-e GOOGLE_CLIENT_ID=$(GOOGLE_CLIENT_ID) \
		-e GOOGLE_CLIENT_SECRET=$(GOOGLE_CLIENT_SECRET) \
		-e GITHUB_TOKEN=$(GITHUB_TOKEN) \
		-e JWT_SECRET=$(JWT_SECRET) \
		wormbase/website

.PHONY: build-run-test
build-run-test:
	docker run -i \
		-a stdout \
		--entrypoint "" \
		-v /usr/local/wormbase/website-shared-files/html:/usr/local/wormbase/website-shared-files/html \
		-v /usr/local/wormbase/services:/usr/local/wormbase/services \
		-v /usr/local/wormbase/databases:/usr/local/wormbase/databases \
		-v ${PWD}/logs:/usr/local/wormbase/website/logs \
		--network=wb-network \
		--init \
		-p ${CATALYST_PORT}:5000 \
		-e ACEDB_HOST=$(ACEDB_HOST) \
		-e AWS_ACCESS_KEY_ID \
		-e AWS_SECRET_ACCESS_KEY \
		-e GOOGLE_CLIENT_ID=$(GOOGLE_CLIENT_ID) \
		-e GOOGLE_CLIENT_SECRET=$(GOOGLE_CLIENT_SECRET) \
		-e GITHUB_TOKEN=$(GITHUB_TOKEN) \
		-e JWT_SECRET=$(JWT_SECRET) \
		wormbase/website \
		/bin/bash -c "API_TESTS=1 perl t/api.t; perl t/rest.t"

.PHONY: eb-local-run
eb-local-run: CATALYST_APP ?= staging

eb-local-run:
	 @eb local run \
		--envvars APP=${CATALYST_APP},ACEDB_HOST=${ACEDB_HOST_STAND_ALONE},GOOGLE_CLIENT_ID=${GOOGLE_CLIENT_ID},GOOGLE_CLIENT_SECRET=${GOOGLE_CLIENT_SECRET},GITHUB_TOKEN=${GITHUB_TOKEN},JWT_SECRET='${JWT_SECRET}'

.PHONY: eb-setenv
eb-setenv:
	@eb setenv --timeout 10 \
		APP=${CATALYST_APP} \
		ACEDB_HOST=${ACEDB_HOST_STAND_ALONE} \
		GOOGLE_CLIENT_ID=${GOOGLE_CLIENT_ID} \
		GOOGLE_CLIENT_SECRET=${GOOGLE_CLIENT_SECRET} \
		GITHUB_TOKEN=${GITHUB_TOKEN} \
		JWT_SECRET='${JWT_SECRET}'

.PHONY: eb-create
eb-create: CATALYST_APP ?= production
eb-create: CNAME ?= wormbase-website-preproduction
eb-create: EB_ENV_NAME ?= wormbase-website-${LOWER_WS_VERSION}
eb-create:
	@eb create ${EB_ENV_NAME} --cfg v2 --cname ${CNAME} --keyname search-admin --envvars APP=${CATALYST_APP},ACEDB_HOST=${ACEDB_HOST_STAND_ALONE},GOOGLE_CLIENT_ID=${GOOGLE_CLIENT_ID},GOOGLE_CLIENT_SECRET=${GOOGLE_CLIENT_SECRET},GITHUB_TOKEN=${GITHUB_TOKEN},JWT_SECRET='${JWT_SECRET}'

.PHONY: eb-create-staging
eb-create-staging:
	CATALYST_APP=staging EB_ENV_NAME=wormbase-website-staging CNAME=wormbase-website-staging $(MAKE) eb-create

.PHONY: dockerrun-latest
dockerrun-latest:
	@sed -i -r 's/website:[^"]+/website:'"latest"'/g' Dockerrun.aws.json
	@sed -i -r 's/website:[^"]+/website:'"latest"'/g' docker-compose.yml


.PHONY: staging-deploy
staging-deploy:
	eb use wormbase-website-staging
	CATALYST_APP=staging $(MAKE) eb-setenv
	eb deploy --region us-east-1 --timeout 10
	eb tags --delete Purpose
	eb tags --add Purpose=staging

.PHONY: release
release: VERSION ?= ${WS_VERSION}
release: aws-ecr-login
	VERSION=${VERSION} ./release.sh

.PHONY: production-deploy
production-deploy:
	eb use wormbase-website-${LOWER_WS_VERSION}  # assuming rolling update
	CATALYST_APP=production $(MAKE) eb-setenv
	eb deploy --region us-east-1 --timeout 10
	eb tags --delete Purpose
	eb tags --add Purpose=production

.PHONY: deploy-no-eb
deploy-no-eb: COMPOSE_PROJECT_NAME = staging_build  # for both production and staging environment. It's designed to be identical to the derived project name when deployed from the jenkins workspace, where deployments usually happen. This allows docker-compose cli to be used without -p when executed from said directory. At the same time, if the make target were executed else where, the same project name is applied, allowing the stack to be shut down by future deployments.
deploy-no-eb: export CATALYST_PORT = 5000
deploy-no-eb: aws-ecr-login
	docker-compose pull
	docker-compose -f docker-compose.yml -f docker-compose.prod.yml down
	docker-compose -f docker-compose.yml -f docker-compose.prod.yml up -d

.PHONY: staging-deploy-no-eb
staging-deploy-no-eb: export CATALYST_APP ?= staging
staging-deploy-no-eb:
	$(MAKE) deploy-no-eb

# production deployment without EB, ie for bot instance
.PHONY: production-deploy-no-eb
production-deploy-no-eb: export CATALYST_APP ?= production
production-deploy-no-eb:
	$(MAKE) deploy-no-eb

# dev deployment
.PHONY: dev
dev: aws-ecr-login
	(cd client/ && yarn install --frozen-lockfile) # dependency installation on host is required for prettier in git precommit hook
	docker-compose pull
	$(MAKE) dev-down
	docker-compose -f docker-compose.yml -f docker-compose.dev.yml up

.PHONY: dev-down
dev-down:
	docker-compose -f docker-compose.yml -f docker-compose.dev.yml down

# local dev deployment
.PHONY: local
local:
	(cd client/ && yarn install --frozen-lockfile) # dependency installation on host is required for prettier in git precommit hook
	docker-compose -f docker-compose.local.yml pull
	$(MAKE) local-down
	docker-compose -f docker-compose.local.yml up

.PHONY: local-down
local-down:
	docker-compose -f docker-compose.local.yml down

.PHONY: console
console:
	docker-compose logs -f ${SERVICE}