Skip to content

Commit

Permalink
2021_03_17_16_40
Browse files Browse the repository at this point in the history
  • Loading branch information
fzc1997 committed Mar 17, 2021
1 parent a4a7088 commit 4e4544d
Show file tree
Hide file tree
Showing 2 changed files with 2 additions and 2 deletions.
Binary file removed ._README.md
Binary file not shown.
4 changes: 2 additions & 2 deletions README.md
Original file line number Diff line number Diff line change
Expand Up @@ -46,8 +46,8 @@ Maintainer: Zhi-Can Fu(fuzhican@picb.ac.cn)
- **[Mills_and_1000G_gold_standard.indels.hg38.vcf.gz](https://console.cloud.google.com/storage/browser/_details/genomics-public-data/resources/broad/hg38/v0/Mills_and_1000G_gold_standard.indels.hg38.vcf.gz)**
* vcfs for GATK VariantRecalibrator (Mouse)
- **[EVA_SNP_all_mm10.vcf.gz](http://ftp.ebi.ac.uk/pub/databases/eva/rs_releases/release_1/by_species/Mouse_10090/GRCm38.p4/GCA_000001635.6_current_ids.vcf.gz)**
- **MGP_SNP_indel_v5.vcf.gz** (merged from [MGP_SNP_v5.vcf.gz](ftp-mouse.sanger.ac.uk/current_snps/mgp.v5.merged.snps_all.dbSNP142.vcf.gz) and [MGP_indel_v5.vcf.gz](ftp-mouse.sanger.ac.uk/current_snps/mgp.v5.merged.indels.dbSNP142.normed.vcf.gz))
- **[MGP_indel_v5.vcf.gz](ftp-mouse.sanger.ac.uk/current_snps/mgp.v5.merged.indels.dbSNP142.normed.vcf.gz)**
- **MGP_SNP_indel_v5.vcf.gz** (merged from [MGP_SNP_v5.vcf.gz](http://ftp-mouse.sanger.ac.uk/current_snps/mgp.v5.merged.snps_all.dbSNP142.vcf.gz) and [MGP_indel_v5.vcf.gz](http://ftp-mouse.sanger.ac.uk/current_snps/mgp.v5.merged.indels.dbSNP142.normed.vcf.gz))
- **[MGP_indel_v5.vcf.gz](http://ftp-mouse.sanger.ac.uk/current_snps/mgp.v5.merged.indels.dbSNP142.normed.vcf.gz)**
* files used to filter out the background variants (Human)
- **[NCBI_dbSNP_all_hg38.vcf.gz](https://ftp.ncbi.nih.gov/snp/organisms/human_9606/VCF/00-All.vcf.gz)**
- **[UCSC_RepeatMask_hg38.bed](http://hgdownload.soe.ucsc.edu/goldenPath/hg38/database/rmsk.txt.gz)**
Expand Down

0 comments on commit 4e4544d

Please sign in to comment.