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sessionInfo_readingIn.txt
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sessionInfo_readingIn.txt
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R version 4.1.2 (2021-11-01)
Platform: x86_64-conda-linux-gnu (64-bit)
Running under: Red Hat Enterprise Linux Server release 6.3 (Santiago)
Matrix products: default
BLAS/LAPACK: /pbtech_mounts/homes022/frd2007/miniconda3/envs/r4_env/lib/libopenblasp-r0.3.18.so
locale:
[1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C
[3] LC_TIME=en_US.UTF-8 LC_COLLATE=en_US.UTF-8
[5] LC_MONETARY=en_US.UTF-8 LC_MESSAGES=en_US.UTF-8
[7] LC_PAPER=en_US.UTF-8 LC_NAME=C
[9] LC_ADDRESS=C LC_TELEPHONE=C
[11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C
attached base packages:
[1] stats4 stats graphics grDevices utils datasets methods
[8] base
other attached packages:
[1] SingleR_1.8.1 celldex_1.4.0
[3] scater_1.22.0 ggplot2_3.3.5
[5] batchelor_1.10.0 hdf5r_1.3.5
[7] magrittr_2.0.3 data.table_1.14.2
[9] BiocParallel_1.28.3 scran_1.22.1
[11] scuttle_1.4.0 SingleCellExperiment_1.16.0
[13] SummarizedExperiment_1.24.0 Biobase_2.54.0
[15] GenomicRanges_1.46.1 GenomeInfoDb_1.30.1
[17] IRanges_2.28.0 S4Vectors_0.32.4
[19] BiocGenerics_0.40.0 MatrixGenerics_1.6.0
[21] matrixStats_0.61.0 Matrix_1.4-1
loaded via a namespace (and not attached):
[1] ggbeeswarm_0.6.0 colorspace_2.0-3
[3] ellipsis_0.3.2 bluster_1.4.0
[5] XVector_0.34.0 BiocNeighbors_1.12.0
[7] ggrepel_0.9.1 bit64_4.0.5
[9] interactiveDisplayBase_1.32.0 AnnotationDbi_1.56.2
[11] fansi_1.0.3 sparseMatrixStats_1.6.0
[13] cachem_1.0.6 ResidualMatrix_1.4.0
[15] cluster_2.1.3 dbplyr_2.1.1
[17] png_0.1-7 shiny_1.7.1
[19] BiocManager_1.30.16 compiler_4.1.2
[21] httr_1.4.2 dqrng_0.3.0
[23] assertthat_0.2.1 fastmap_1.1.0
[25] limma_3.50.1 cli_3.2.0
[27] later_1.3.0 BiocSingular_1.10.0
[29] htmltools_0.5.2 tools_4.1.2
[31] rsvd_1.0.5 igraph_1.3.0
[33] gtable_0.3.0 glue_1.6.2
[35] GenomeInfoDbData_1.2.7 dplyr_1.0.8
[37] rappdirs_0.3.3 Rcpp_1.0.8.3
[39] vctrs_0.4.0 Biostrings_2.62.0
[41] ExperimentHub_2.2.1 DelayedMatrixStats_1.16.0
[43] beachmat_2.10.0 mime_0.12
[45] lifecycle_1.0.1 irlba_2.3.5
[47] statmod_1.4.36 AnnotationHub_3.2.2
[49] edgeR_3.36.0 zlibbioc_1.40.0
[51] scales_1.1.1 promises_1.2.0.1
[53] parallel_4.1.2 yaml_2.3.5
[55] curl_4.3.2 memoise_2.0.1
[57] gridExtra_2.3 RSQLite_2.2.12
[59] BiocVersion_3.14.0 ScaledMatrix_1.2.0
[61] filelock_1.0.2 rlang_1.0.2
[63] pkgconfig_2.0.3 bitops_1.0-7
[65] lattice_0.20-45 purrr_0.3.4
[67] bit_4.0.4 tidyselect_1.1.2
[69] R6_2.5.1 generics_0.1.2
[71] metapod_1.2.0 DelayedArray_0.20.0
[73] DBI_1.1.2 pillar_1.7.0
[75] withr_2.5.0 KEGGREST_1.34.0
[77] RCurl_1.98-1.6 tibble_3.1.6
[79] crayon_1.5.1 utf8_1.2.2
[81] BiocFileCache_2.2.1 viridis_0.6.2
[83] locfit_1.5-9.5 grid_4.1.2
[85] blob_1.2.2 digest_0.6.29
[87] xtable_1.8-4 httpuv_1.6.5
[89] munsell_0.5.0 beeswarm_0.4.0
[91] viridisLite_0.4.0 vipor_0.4.5