DESCRIPTION

Package: AcidExperiment
Title: Acid Genomics Summarized Experiment
Description: Toolkit to extend the functionality of SummarizedExperiment.
Version: 0.5.4
Date: 2023-12-01
Authors@R: c(
    person(
        "Michael", "Steinbaugh",
        email = "mike@steinbaugh.com",
        role = c("aut", "cre"),
        comment = c(ORCID = "0000-0002-2403-2221")
    ),
    person(
        given = "Acid Genomics",
        role = c("cph", "fnd")
    ),
    person(
        "Rory", "Kirchner",
        email = "roryk@alum.mit.edu",
        role = "ctb",
        comment = c(ORCID = "0000-0003-4814-5885")
    ))
URL:
    https://r.acidgenomics.com/packages/acidexperiment/,
    https://github.com/acidgenomics/r-acidexperiment/
BugReports: https://github.com/acidgenomics/r-acidexperiment/issues/
License: AGPL-3
Encoding: UTF-8
Depends: R (>= 4.3)
Imports:
    AcidBase (>= 0.7.2),
    AcidCLI (>= 0.3.0),
    AcidGenerics (>= 0.7.4),
    AcidGenomes (>= 0.6.1),
    AcidPlyr (>= 0.5.2),
    Biobase (>= 2.60.0),
    BiocGenerics (>= 0.46.0),
    GenomicRanges (>= 1.52.0),
    IRanges (>= 2.34.0),
    Matrix (>= 1.6.1),
    S4Vectors (>= 0.38.0),
    SummarizedExperiment (>= 1.30.0),
    goalie (>= 0.7.6),
    pipette (>= 0.15.0),
    syntactic (>= 0.7.1),
    methods,
    utils
Suggests:
    AcidDevTools (>= 0.7.3),
    AcidTest (>= 0.9.0),
    Biostrings (>= 2.68.0),
    GenomeInfoDb (>= 1.36.0),
    scales (>= 1.3.0),
    testthat (>= 3.2.0)
Additional_repositories: https://r.acidgenomics.com
Config/testthat/edition: 3
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.2.3
biocViews: Infrastructure