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NAMESPACE
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# Generated by roxygen2: do not edit by hand
export("metadata2<-")
export(as.DataFrame)
export(as.data.frame)
export(assignAndSaveData)
export(atomize)
export(cacheUrl)
export(decode)
export(droplevels2)
export(encode)
export(export)
export(factorize)
export(fillLines)
export(getJson)
export(getUrlDirList)
export(import)
export(initDir)
export(loadData)
export(loadDataAsName)
export(loadRemoteData)
export(matchRownameColumn)
export(md5)
export(metadata2)
export(naStrings)
export(pasteUrl)
export(pipetteTestsUrl)
export(removeNa)
export(sanitizeNa)
export(sanitizePercent)
export(saveData)
export(sha256)
export(transmit)
export(unfactorize)
exportClasses(PipetteBamFile)
exportClasses(PipetteBcbioCountsFile)
exportClasses(PipetteBcfFile)
exportClasses(PipetteCramFile)
exportClasses(PipetteCsvFile)
exportClasses(PipetteDelimFile)
exportClasses(PipetteExcelFile)
exportClasses(PipetteFastaFile)
exportClasses(PipetteFastqFile)
exportClasses(PipetteFile)
exportClasses(PipetteGafFile)
exportClasses(PipetteGctFile)
exportClasses(PipetteGmtFile)
exportClasses(PipetteGmxFile)
exportClasses(PipetteGrpFile)
exportClasses(PipetteJsonFile)
exportClasses(PipetteLinesFile)
exportClasses(PipetteMafFile)
exportClasses(PipetteMtxFile)
exportClasses(PipetteOboFile)
exportClasses(PipettePzfxFile)
exportClasses(PipetteRDataFile)
exportClasses(PipetteRdsFile)
exportClasses(PipetteRioFile)
exportClasses(PipetteRtracklayerFile)
exportClasses(PipetteSamFile)
exportClasses(PipetteTableFile)
exportClasses(PipetteTsvFile)
exportClasses(PipetteVcfFile)
exportClasses(PipetteYamlFile)
exportMethods("metadata2<-")
exportMethods(as.DataFrame)
exportMethods(as.data.frame)
exportMethods(atomize)
exportMethods(decode)
exportMethods(encode)
exportMethods(export)
exportMethods(factorize)
exportMethods(import)
exportMethods(matchRownameColumn)
exportMethods(metadata2)
exportMethods(removeNa)
exportMethods(sanitizeNa)
exportMethods(sanitizePercent)
exportMethods(unfactorize)
importClassesFrom(GenomicRanges,GRanges)
importClassesFrom(GenomicRanges,GRangesList)
importClassesFrom(IRanges,IRanges)
importClassesFrom(IRanges,Ranges)
importClassesFrom(Matrix,Matrix)
importClassesFrom(S4Vectors,DFrame)
importClassesFrom(S4Vectors,List)
importClassesFrom(S4Vectors,SimpleList)
importFrom(AcidBase,basenameSansExt)
importFrom(AcidBase,compress)
importFrom(AcidBase,decompress)
importFrom(AcidBase,dots)
importFrom(AcidBase,download)
importFrom(AcidBase,fileExt)
importFrom(AcidBase,initDir)
importFrom(AcidBase,methodFunction)
importFrom(AcidBase,pasteUrl)
importFrom(AcidBase,pkgCacheDir)
importFrom(AcidBase,randomString)
importFrom(AcidBase,realpath)
importFrom(AcidBase,simpleClass)
importFrom(AcidBase,standardizeCall)
importFrom(AcidBase,strRemoveEmpty)
importFrom(AcidBase,tempdir2)
importFrom(AcidCLI,abort)
importFrom(AcidCLI,alert)
importFrom(AcidCLI,alertInfo)
importFrom(AcidCLI,alertSuccess)
importFrom(AcidCLI,alertWarning)
importFrom(AcidCLI,toInlineString)
importFrom(AcidGenerics,"metadata2<-")
importFrom(AcidGenerics,as.DataFrame)
importFrom(AcidGenerics,atomize)
importFrom(AcidGenerics,droplevels2)
importFrom(AcidGenerics,encode)
importFrom(AcidGenerics,export)
importFrom(AcidGenerics,factorize)
importFrom(AcidGenerics,import)
importFrom(AcidGenerics,matchRownameColumn)
importFrom(AcidGenerics,metadata2)
importFrom(AcidGenerics,removeNa)
importFrom(AcidGenerics,sanitizeNa)
importFrom(AcidGenerics,sanitizePercent)
importFrom(AcidGenerics,unfactorize)
importFrom(BiocGenerics,anyDuplicated)
importFrom(BiocGenerics,as.data.frame)
importFrom(BiocGenerics,do.call)
importFrom(BiocGenerics,end)
importFrom(BiocGenerics,lapply)
importFrom(BiocGenerics,start)
importFrom(BiocGenerics,strand)
importFrom(BiocGenerics,which)
importFrom(BiocGenerics,width)
importFrom(GenomicRanges,seqnames)
importFrom(Matrix,readMM)
importFrom(Matrix,writeMM)
importFrom(S4Vectors,"mcols<-")
importFrom(S4Vectors,"metadata<-")
importFrom(S4Vectors,DataFrame)
importFrom(S4Vectors,Rle)
importFrom(S4Vectors,SimpleList)
importFrom(S4Vectors,as.factor)
importFrom(S4Vectors,decode)
importFrom(S4Vectors,droplevels)
importFrom(S4Vectors,head)
importFrom(S4Vectors,mcols)
importFrom(S4Vectors,metadata)
importFrom(S4Vectors,na.omit)
importFrom(S4Vectors,runValue)
importFrom(S4Vectors,tail)
importFrom(goalie,allAreAtomic)
importFrom(goalie,allAreExisting)
importFrom(goalie,allAreExistingUrls)
importFrom(goalie,allAreFiles)
importFrom(goalie,allAreIntegerish)
importFrom(goalie,allAreMatchingFixed)
importFrom(goalie,allAreMatchingRegex)
importFrom(goalie,allAreNonExisting)
importFrom(goalie,allHaveAccess)
importFrom(goalie,areDisjointSets)
importFrom(goalie,areSameLength)
importFrom(goalie,areSetEqual)
importFrom(goalie,assert)
importFrom(goalie,bapply)
importFrom(goalie,compressExtPattern)
importFrom(goalie,extPattern)
importFrom(goalie,formalCompress)
importFrom(goalie,hasColnames)
importFrom(goalie,hasCols)
importFrom(goalie,hasDimnames)
importFrom(goalie,hasDuplicates)
importFrom(goalie,hasLength)
importFrom(goalie,hasNames)
importFrom(goalie,hasNoDuplicates)
importFrom(goalie,hasRownames)
importFrom(goalie,hasRows)
importFrom(goalie,hasValidDimnames)
importFrom(goalie,hasValidNames)
importFrom(goalie,isADir)
importFrom(goalie,isAFile)
importFrom(goalie,isATempFile)
importFrom(goalie,isAUrl)
importFrom(goalie,isAnExistingUrl)
importFrom(goalie,isAny)
importFrom(goalie,isCharacter)
importFrom(goalie,isFlag)
importFrom(goalie,isInstalled)
importFrom(goalie,isInt)
importFrom(goalie,isMatchingFixed)
importFrom(goalie,isMatchingRegex)
importFrom(goalie,isNonNegative)
importFrom(goalie,isPositive)
importFrom(goalie,isScalar)
importFrom(goalie,isString)
importFrom(goalie,isSubset)
importFrom(goalie,requireNamespaces)
importFrom(goalie,validNames)
importFrom(goalie,validate)
importFrom(jsonlite,read_json)
importFrom(methods,"slot<-")
importFrom(methods,as)
importFrom(methods,hasMethod)
importFrom(methods,is)
importFrom(methods,new)
importFrom(methods,setGeneric)
importFrom(methods,signature)
importFrom(methods,slot)
importFrom(methods,validObject)
importFrom(syntactic,autopadZeros)
importFrom(syntactic,makeNames)
importFrom(utils,packageName)
importFrom(utils,packageVersion)
importFrom(yaml,yaml.load_file)