diff --git a/.github/workflows/ci.yml b/.github/workflows/ci.yml
index f985433..6363504 100644
--- a/.github/workflows/ci.yml
+++ b/.github/workflows/ci.yml
@@ -53,5 +53,5 @@ jobs:
           
       - name: Run pipeline with test data
         run: |
-          nextflow run ${GITHUB_WORKSPACE} -profile test --outdir ./results
+          nextflow run ${GITHUB_WORKSPACE} -profile test,docker --outdir ./results
 
diff --git a/configs/test.config b/configs/test.config
index 4db9644..1cb2d48 100644
--- a/configs/test.config
+++ b/configs/test.config
@@ -24,16 +24,5 @@ params {
     ref_genome  = 'https://raw.githubusercontent.com/adamd3/BactSeq/main/test_data/Mabs.fasta'
     ref_ann     = 'https://raw.githubusercontent.com/adamd3/BactSeq/main/test_data/Mabs.gff3'
     sample_file = 'https://raw.githubusercontent.com/adamd3/BactSeq/main/test_data/sample_sheet_1.tsv'
-
-    process.container      = 'adamd3/bactseq:latest'
-    docker {
-        enabled            = true
-        userEmulation      = true
-        runOptions         = '--pull=always'
-    }
-    singularity.enabled    = false
-    podman.enabled         = false
-    shifter.enabled        = false
-    charliecloud.enabled   = false
     
 }
\ No newline at end of file