dMRI to dwi

Author: aghaeifar

CMakeLists.txt

@@ -41,13 +41,13 @@ endif()
 # Add Boost and CUDA include directories
 include_directories(${Boost_INCLUDE_DIRS} ${HDF5_INCLUDE_DIRS} ./include ./src ./src/shapes)
 # Add subfolders
-add_subdirectory(./src/dMRI)
+add_subdirectory(./src/dwi)
 add_subdirectory(./src/phantom)
 add_subdirectory(./src/config)
 add_subdirectory(./src/sim)
 
 # Add the executable
-set(SOURCES ./src/spinwalk.cu ${SUBCOMMAND_PHANTOM} ${SUBCOMMAND_SIM} ${SUBCOMMAND_GRADIENT} ${SUBCOMMAND_CONFIG})
+set(SOURCES ./src/spinwalk.cu ${SUBCOMMAND_PHANTOM} ${SUBCOMMAND_SIM} ${SUBCOMMAND_DWI} ${SUBCOMMAND_CONFIG})
 
 if(CMAKE_CUDA_COMPILER)
     add_executable(${project} ${SOURCES})

src/dMRI/CMakeLists.txt renamed to src/dwi/CMakeLists.txt

@@ -1,4 +1,4 @@
-set(SUBCOMMAND_GRADIENT
+set(SUBCOMMAND_DWI
     ${CMAKE_CURRENT_SOURCE_DIR}/handler.cpp
     ${CMAKE_CURRENT_SOURCE_DIR}/pgse.cpp
     PARENT_SCOPE)

src/dMRI/handler.cpp renamed to src/dwi/handler.cpp

@@ -26,7 +26,7 @@
 #include "definitions.h"
 #include "sim/monte_carlo.cuh"
 #include "phantom/handler.h"
-#include "dMRI/handler.h"
+#include "dwi/handler.h"
 #include "config/handler.h"
 #ifdef __CUDACC__
 #include "sim/device_helper.cuh"