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Assess performance of GLMs on simulated data. TP would be a 'ground truth' dPSI of the same sign as the junctionCounts calculation given a p-value lower than chosen alpha in the case of comparison across levels of a single factor.
In the case of more complicated hypotheses such as testing interaction terms, a TP might be the presence of a 'ground truth' ddPSI of the same sign as junctionCounts calculation between pairs of A levels across B levels (e.g in the case of full: PSI ~ A + B + A:B vs red: PSI ~ A + B
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enhancementNew feature or requestNew feature or request