Software tools for ECG image processing and digitization
| File | Description |
|---|---|
| ROI | ECG lead detection with YOLOv7 |
| File | Description |
|---|---|
| ecg_grid_size_from_paper.m | ECG grid size estimate from paper size and image width |
| ecg_gridest_margdist.m | ECG grid size estimation - marginal image intensity approach |
| ecg_gridest_spectral.m | ECG grid size estimation - spectral approach |
| ecg_gridest_matchedfilt.m | ECG grid size estimation - matched filter-based approach |
| image_to_sequence.m | Extract time-series from an ECG segment |
| tanh_sat.m | Saturate signal/image intensity with a tanh function |
| File | Description |
|---|---|
| test_ecg_grid_size_estimator.m | A test script for running and comparing the grid size estimation methods |
| test_ecg_sequence_extraction.m | A test script for time-series extraction from an image segment |
Please include references to the following articles in any publications:
-
Kshama Kodthalu Shivashankara, Deepanshi, Afagh Mehri Shervedani, Matthew A. Reyna, Gari D. Clifford, Reza Sameni (2024). ECG-image-kit: a synthetic image generation toolbox to facilitate deep learning-based electrocardiogram digitization. In Physiological Measurement. IOP Publishing. doi: 10.1088/1361-6579/ad4954
-
ECG-Image-Kit: A Toolkit for Synthesis, Analysis, and Digitization of Electrocardiogram Images, (2024). URL: https://github.com/alphanumericslab/ecg-image-kit
- Deepanshi, Department of Biomedical Informatics, Emory University, GA, US
- Kshama Kodthalu Shivashankara, School of Electrical and Computer Engineering, Georgia Institute of Technology, Atlanta, GA, US
- Matthew A Reyna, Department of Biomedical Informatics, Emory University, GA, US
- Gari D Clifford, Department of Biomedical Informatics and Biomedical Engineering, Emory University and Georgia Tech, GA, US
- Reza Sameni (contact person), Department of Biomedical Informatics and Biomedical Engineering, Emory University and Georgia Tech, GA, US
Please direct any inquiries, bug reports or requests for joining the team to: ecg-image-kit@dbmi.emory.edu.
