forked from HadrienG/InSilicoSeq
-
Notifications
You must be signed in to change notification settings - Fork 0
/
Pipfile.lock
285 lines (285 loc) · 16.1 KB
/
Pipfile.lock
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
{
"_meta": {
"hash": {
"sha256": "287c27e3736b4b4796236a5d95ba45297aea90e37e579f25f4ebb85b76d5edea"
},
"pipfile-spec": 6,
"requires": {},
"sources": [
{
"name": "pypi",
"url": "https://pypi.python.org/simple",
"verify_ssl": true
}
]
},
"default": {
"biopython": {
"hashes": [
"sha256:010142a8ec2549ff0649edd497658964ef1a18eefdb9fd942ec1e81b292ce2d9",
"sha256:0b9fbb0d3022dc22716da108b8a81b80d952cd97ac1f106de491dce850f92f62",
"sha256:0df5cddef2819c975e6508adf5d85aa046e449df5420d02b04871c7836b41273",
"sha256:194528eda6856a4c68f840ca0bcc9b544a5edee3548b97521084e7ac38c833ca",
"sha256:195f099c2c0c39518b6df921ab2b3cc43a601896018fc61909ac8385d5878866",
"sha256:1ee0a0b6c2376680fea6642d5080baa419fd73df104a62d58a8baf7a8bbe4564",
"sha256:2bd5a630be2a8e593094f7b1717fc962eda8931b68542b97fbf9bd8e2ac1e08d",
"sha256:4565c97fab16c5697d067b821b6a1da0ec3ef36a9c96cf103ac7b4a94eb9f9ba",
"sha256:48d424453a5512a1d1d41a4acabdfe5291da1f491a2d3606f2b0e4fbd63aeda6",
"sha256:5c0b369f91a76b8e5e36624d075585c3f0f088ea4a6e3d015c48f08e48ce0114",
"sha256:75b55000793f6b76334b8e80dc7e6d8cd2b019af917aa431cea6646e8e696c7f",
"sha256:ada611f12ee3b0bef7308ef41ee7b94898613b369ab44e0268d74bd1d6a06920",
"sha256:cc3b0b78022d14f11d508038a288a189d03c97c476d6636c7b6f98bd8bc8462b",
"sha256:e0af107cc62a905d13d35dd7b38f335a37752ede45e4617139e84409a6a88dc4",
"sha256:f1076653937947773768455556b1d24acad9575759e9089082f32636b09add54",
"sha256:f5021a398c898b9cf6815cc5171c146a601b935b55364c53e6516a2545ab740c"
],
"index": "pypi",
"version": "==1.78"
},
"certifi": {
"hashes": [
"sha256:5930595817496dd21bb8dc35dad090f1c2cd0adfaf21204bf6732ca5d8ee34d3",
"sha256:8fc0819f1f30ba15bdb34cceffb9ef04d99f420f68eb75d901e9560b8749fc41"
],
"version": "==2020.6.20"
},
"chardet": {
"hashes": [
"sha256:84ab92ed1c4d4f16916e05906b6b75a6c0fb5db821cc65e70cbd64a3e2a5eaae",
"sha256:fc323ffcaeaed0e0a02bf4d117757b98aed530d9ed4531e3e15460124c106691"
],
"version": "==3.0.4"
},
"future": {
"hashes": [
"sha256:b1bead90b70cf6ec3f0710ae53a525360fa360d306a86583adc6bf83a4db537d"
],
"index": "pypi",
"version": "==0.18.2"
},
"idna": {
"hashes": [
"sha256:b307872f855b18632ce0c21c5e45be78c0ea7ae4c15c828c20788b26921eb3f6",
"sha256:b97d804b1e9b523befed77c48dacec60e6dcb0b5391d57af6a65a312a90648c0"
],
"markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3'",
"version": "==2.10"
},
"joblib": {
"hashes": [
"sha256:698c311779f347cf6b7e6b8a39bb682277b8ee4aba8cf9507bc0cf4cd4737b72",
"sha256:9e284edd6be6b71883a63c9b7f124738a3c16195513ad940eae7e3438de885d5"
],
"index": "pypi",
"version": "==0.17.0"
},
"numpy": {
"hashes": [
"sha256:04c7d4ebc5ff93d9822075ddb1751ff392a4375e5885299445fcebf877f179d5",
"sha256:0bfd85053d1e9f60234f28f63d4a5147ada7f432943c113a11afcf3e65d9d4c8",
"sha256:0c66da1d202c52051625e55a249da35b31f65a81cb56e4c69af0dfb8fb0125bf",
"sha256:0d310730e1e793527065ad7dde736197b705d0e4c9999775f212b03c44a8484c",
"sha256:1669ec8e42f169ff715a904c9b2105b6640f3f2a4c4c2cb4920ae8b2785dac65",
"sha256:2117536e968abb7357d34d754e3733b0d7113d4c9f1d921f21a3d96dec5ff716",
"sha256:3733640466733441295b0d6d3dcbf8e1ffa7e897d4d82903169529fd3386919a",
"sha256:4339741994c775396e1a274dba3609c69ab0f16056c1077f18979bec2a2c2e6e",
"sha256:51ee93e1fac3fe08ef54ff1c7f329db64d8a9c5557e6c8e908be9497ac76374b",
"sha256:54045b198aebf41bf6bf4088012777c1d11703bf74461d70cd350c0af2182e45",
"sha256:58d66a6b3b55178a1f8a5fe98df26ace76260a70de694d99577ddeab7eaa9a9d",
"sha256:59f3d687faea7a4f7f93bd9665e5b102f32f3fa28514f15b126f099b7997203d",
"sha256:62139af94728d22350a571b7c82795b9d59be77fc162414ada6c8b6a10ef5d02",
"sha256:7118f0a9f2f617f921ec7d278d981244ba83c85eea197be7c5a4f84af80a9c3c",
"sha256:7c6646314291d8f5ea900a7ea9c4261f834b5b62159ba2abe3836f4fa6705526",
"sha256:967c92435f0b3ba37a4257c48b8715b76741410467e2bdb1097e8391fccfae15",
"sha256:9a3001248b9231ed73894c773142658bab914645261275f675d86c290c37f66d",
"sha256:aba1d5daf1144b956bc87ffb87966791f5e9f3e1f6fab3d7f581db1f5b598f7a",
"sha256:addaa551b298052c16885fc70408d3848d4e2e7352de4e7a1e13e691abc734c1",
"sha256:b594f76771bc7fc8a044c5ba303427ee67c17a09b36e1fa32bde82f5c419d17a",
"sha256:c35a01777f81e7333bcf276b605f39c872e28295441c265cd0c860f4b40148c1",
"sha256:cebd4f4e64cfe87f2039e4725781f6326a61f095bc77b3716502bed812b385a9",
"sha256:d526fa58ae4aead839161535d59ea9565863bb0b0bdb3cc63214613fb16aced4",
"sha256:d7ac33585e1f09e7345aa902c281bd777fdb792432d27fca857f39b70e5dd31c",
"sha256:e6ddbdc5113628f15de7e4911c02aed74a4ccff531842c583e5032f6e5a179bd",
"sha256:eb25c381d168daf351147713f49c626030dcff7a393d5caa62515d415a6071d8"
],
"index": "pypi",
"version": "==1.19.2"
},
"pysam": {
"hashes": [
"sha256:00a1f62e704410343ef6a6232f5bdd29f67f88326a89757e665dee035ef36112",
"sha256:00c7f094be02ba8daf2feb51467b70142f9cca22fb5336b504bc58568a2500de",
"sha256:0b0f407ad96b3bd492017ee82a317ac0fc68dc858ecba9119e4ae69b1cda9910",
"sha256:0f3e42cbc9bac07cf6a880c2ae318c24aea20f43a3f3562e53068266627cb7a7",
"sha256:179e68c5acb8cc6a79a79441ba6cffb88d7c3afb74c7b170395c248cb7b9f138",
"sha256:2581ab403fdba02e2261cf2f9df783f24de5530e1f77c84236707f8d8706cd91",
"sha256:28fd770354ecf621ee47425bfdcf012097fa7a8ff590b49ec953d059221886c2",
"sha256:333e9e73addb0579aa8af08c6618b359bd038a3710428b7ce1caef0075392b3c",
"sha256:3d5158231cab88cb8a931b78f34fb6eb939a093cb8d5273452cc12d3206e445e",
"sha256:495815ef466aefa80d949ac449cd364f21cb20ee56b1a0bd623352ad3f73bf14",
"sha256:4ddcb84e471aff2f55beb5ed2d368dc6e773947c628a1a7b6d5ceec9c141ce51",
"sha256:5a9730d9775dc30a8cc197ca3e5340b7c3cb63b66c387ecfd8e665426f083f65",
"sha256:5b6a2258e326204ee94bf4d482d9a137ce8cbb3f3cefada42c7f26802d15b95d",
"sha256:5bcf5d49922aeaccd0dbf0b3e4327b03be2883814bf2476e83f20fc24d7be02b",
"sha256:62b72de5af5b8550f376a580fecb23b81d989140cf95f8465fef2c3d96006424",
"sha256:7c358f69620e7b9af7548a62ca2a1fb6b51c03fcdc79a0ca8d1839ad92a532ce",
"sha256:a535e15cbd6e27f4ab74cabca30ca1df7eea283cb91d3b536d47fe113fee066f",
"sha256:d9f116b2e32b678bbd95ba0c83a449d0a59f2deb04a6fc02f42b5cd9e406bde5"
],
"index": "pypi",
"version": "==0.15.4"
},
"requests": {
"hashes": [
"sha256:b3559a131db72c33ee969480840fff4bb6dd111de7dd27c8ee1f820f4f00231b",
"sha256:fe75cc94a9443b9246fc7049224f75604b113c36acb93f87b80ed42c44cbb898"
],
"index": "pypi",
"version": "==2.24.0"
},
"scipy": {
"hashes": [
"sha256:066c513d90eb3fd7567a9e150828d39111ebd88d3e924cdfc9f8ce19ab6f90c9",
"sha256:07e52b316b40a4f001667d1ad4eb5f2318738de34597bd91537851365b6c61f1",
"sha256:0a0e9a4e58a4734c2eba917f834b25b7e3b6dc333901ce7784fd31aefbd37b2f",
"sha256:1c7564a4810c1cd77fcdee7fa726d7d39d4e2695ad252d7c86c3ea9d85b7fb8f",
"sha256:315aa2165aca31375f4e26c230188db192ed901761390be908c9b21d8b07df62",
"sha256:6e86c873fe1335d88b7a4bfa09d021f27a9e753758fd75f3f92d714aa4093768",
"sha256:8e28e74b97fc8d6aa0454989db3b5d36fc27e69cef39a7ee5eaf8174ca1123cb",
"sha256:92eb04041d371fea828858e4fff182453c25ae3eaa8782d9b6c32b25857d23bc",
"sha256:a0afbb967fd2c98efad5f4c24439a640d39463282040a88e8e928db647d8ac3d",
"sha256:a785409c0fa51764766840185a34f96a0a93527a0ff0230484d33a8ed085c8f8",
"sha256:cca9fce15109a36a0a9f9cfc64f870f1c140cb235ddf27fe0328e6afb44dfed0",
"sha256:d56b10d8ed72ec1be76bf10508446df60954f08a41c2d40778bc29a3a9ad9bce",
"sha256:dac09281a0eacd59974e24525a3bc90fa39b4e95177e638a31b14db60d3fa806",
"sha256:ec5fe57e46828d034775b00cd625c4a7b5c7d2e354c3b258d820c6c72212a6ec",
"sha256:eecf40fa87eeda53e8e11d265ff2254729d04000cd40bae648e76ff268885d66",
"sha256:fc98f3eac993b9bfdd392e675dfe19850cc8c7246a8fd2b42443e506344be7d9"
],
"index": "pypi",
"version": "==1.5.2"
},
"urllib3": {
"hashes": [
"sha256:91056c15fa70756691db97756772bb1eb9678fa585d9184f24534b100dc60f4a",
"sha256:e7983572181f5e1522d9c98453462384ee92a0be7fac5f1413a1e35c56cc0461"
],
"markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3, 3.4' and python_version < '4'",
"version": "==1.25.10"
}
},
"develop": {
"certifi": {
"hashes": [
"sha256:5930595817496dd21bb8dc35dad090f1c2cd0adfaf21204bf6732ca5d8ee34d3",
"sha256:8fc0819f1f30ba15bdb34cceffb9ef04d99f420f68eb75d901e9560b8749fc41"
],
"version": "==2020.6.20"
},
"chardet": {
"hashes": [
"sha256:84ab92ed1c4d4f16916e05906b6b75a6c0fb5db821cc65e70cbd64a3e2a5eaae",
"sha256:fc323ffcaeaed0e0a02bf4d117757b98aed530d9ed4531e3e15460124c106691"
],
"version": "==3.0.4"
},
"codecov": {
"hashes": [
"sha256:61bc71b5f58be8000bf9235aa9d0112f8fd3acca00aa02191bb81426d22a8584",
"sha256:a333626e6ff882db760ce71a1d84baf80ddff2cd459a3cc49b41fdac47d77ca5",
"sha256:d30ad6084501224b1ba699cbf018a340bb9553eb2701301c14133995fdd84f33"
],
"index": "pypi",
"version": "==2.1.10"
},
"coverage": {
"hashes": [
"sha256:0203acd33d2298e19b57451ebb0bed0ab0c602e5cf5a818591b4918b1f97d516",
"sha256:0f313707cdecd5cd3e217fc68c78a960b616604b559e9ea60cc16795c4304259",
"sha256:1c6703094c81fa55b816f5ae542c6ffc625fec769f22b053adb42ad712d086c9",
"sha256:1d44bb3a652fed01f1f2c10d5477956116e9b391320c94d36c6bf13b088a1097",
"sha256:280baa8ec489c4f542f8940f9c4c2181f0306a8ee1a54eceba071a449fb870a0",
"sha256:29a6272fec10623fcbe158fdf9abc7a5fa032048ac1d8631f14b50fbfc10d17f",
"sha256:2b31f46bf7b31e6aa690d4c7a3d51bb262438c6dcb0d528adde446531d0d3bb7",
"sha256:2d43af2be93ffbad25dd959899b5b809618a496926146ce98ee0b23683f8c51c",
"sha256:381ead10b9b9af5f64646cd27107fb27b614ee7040bb1226f9c07ba96625cbb5",
"sha256:47a11bdbd8ada9b7ee628596f9d97fbd3851bd9999d398e9436bd67376dbece7",
"sha256:4d6a42744139a7fa5b46a264874a781e8694bb32f1d76d8137b68138686f1729",
"sha256:50691e744714856f03a86df3e2bff847c2acede4c191f9a1da38f088df342978",
"sha256:530cc8aaf11cc2ac7430f3614b04645662ef20c348dce4167c22d99bec3480e9",
"sha256:582ddfbe712025448206a5bc45855d16c2e491c2dd102ee9a2841418ac1c629f",
"sha256:63808c30b41f3bbf65e29f7280bf793c79f54fb807057de7e5238ffc7cc4d7b9",
"sha256:71b69bd716698fa62cd97137d6f2fdf49f534decb23a2c6fc80813e8b7be6822",
"sha256:7858847f2d84bf6e64c7f66498e851c54de8ea06a6f96a32a1d192d846734418",
"sha256:78e93cc3571fd928a39c0b26767c986188a4118edc67bc0695bc7a284da22e82",
"sha256:7f43286f13d91a34fadf61ae252a51a130223c52bfefb50310d5b2deb062cf0f",
"sha256:86e9f8cd4b0cdd57b4ae71a9c186717daa4c5a99f3238a8723f416256e0b064d",
"sha256:8f264ba2701b8c9f815b272ad568d555ef98dfe1576802ab3149c3629a9f2221",
"sha256:9342dd70a1e151684727c9c91ea003b2fb33523bf19385d4554f7897ca0141d4",
"sha256:9361de40701666b034c59ad9e317bae95c973b9ff92513dd0eced11c6adf2e21",
"sha256:9669179786254a2e7e57f0ecf224e978471491d660aaca833f845b72a2df3709",
"sha256:aac1ba0a253e17889550ddb1b60a2063f7474155465577caa2a3b131224cfd54",
"sha256:aef72eae10b5e3116bac6957de1df4d75909fc76d1499a53fb6387434b6bcd8d",
"sha256:bd3166bb3b111e76a4f8e2980fa1addf2920a4ca9b2b8ca36a3bc3dedc618270",
"sha256:c1b78fb9700fc961f53386ad2fd86d87091e06ede5d118b8a50dea285a071c24",
"sha256:c3888a051226e676e383de03bf49eb633cd39fc829516e5334e69b8d81aae751",
"sha256:c5f17ad25d2c1286436761b462e22b5020d83316f8e8fcb5deb2b3151f8f1d3a",
"sha256:c851b35fc078389bc16b915a0a7c1d5923e12e2c5aeec58c52f4aa8085ac8237",
"sha256:cb7df71de0af56000115eafd000b867d1261f786b5eebd88a0ca6360cccfaca7",
"sha256:cedb2f9e1f990918ea061f28a0f0077a07702e3819602d3507e2ff98c8d20636",
"sha256:e8caf961e1b1a945db76f1b5fa9c91498d15f545ac0ababbe575cfab185d3bd8"
],
"markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3, 3.4' and python_version < '4'",
"version": "==5.3"
},
"idna": {
"hashes": [
"sha256:b307872f855b18632ce0c21c5e45be78c0ea7ae4c15c828c20788b26921eb3f6",
"sha256:b97d804b1e9b523befed77c48dacec60e6dcb0b5391d57af6a65a312a90648c0"
],
"markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3'",
"version": "==2.10"
},
"nose": {
"hashes": [
"sha256:9ff7c6cc443f8c51994b34a667bbcf45afd6d945be7477b52e97516fd17c53ac",
"sha256:dadcddc0aefbf99eea214e0f1232b94f2fa9bd98fa8353711dacb112bfcbbb2a",
"sha256:f1bffef9cbc82628f6e7d7b40d7e255aefaa1adb6a1b1d26c69a8b79e6208a98"
],
"index": "pypi",
"version": "==1.3.7"
},
"pep8": {
"hashes": [
"sha256:b22cfae5db09833bb9bd7c8463b53e1a9c9b39f12e304a8d0bba729c501827ee",
"sha256:fe249b52e20498e59e0b5c5256aa52ee99fc295b26ec9eaa85776ffdb9fe6374"
],
"index": "pypi",
"version": "==1.7.1"
},
"pycodestyle": {
"hashes": [
"sha256:2295e7b2f6b5bd100585ebcb1f616591b652db8a741695b3d8f5d28bdc934367",
"sha256:c58a7d2815e0e8d7972bf1803331fb0152f867bd89adf8a01dfd55085434192e"
],
"index": "pypi",
"version": "==2.6.0"
},
"requests": {
"hashes": [
"sha256:b3559a131db72c33ee969480840fff4bb6dd111de7dd27c8ee1f820f4f00231b",
"sha256:fe75cc94a9443b9246fc7049224f75604b113c36acb93f87b80ed42c44cbb898"
],
"index": "pypi",
"version": "==2.24.0"
},
"urllib3": {
"hashes": [
"sha256:91056c15fa70756691db97756772bb1eb9678fa585d9184f24534b100dc60f4a",
"sha256:e7983572181f5e1522d9c98453462384ee92a0be7fac5f1413a1e35c56cc0461"
],
"markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3, 3.4' and python_version < '4'",
"version": "==1.25.10"
}
}
}