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I am currently using DEXseq for alternative splicing analysis. After reading the official documents and my own practical application, I found that when the sample size exceeds 20, the calculation will always stop at the DEXSeq() function. At present, BPPARAM = MultiCoreParam() has been used according to the document and genes with too many 0 values have been deleted.
May I ask, can the BatchJobsParam() mentioned in the documentation for use with large samples provide instructions or examples for adapting to the DEXseq project?
Thanks in advance for any suggestions.
The text was updated successfully, but these errors were encountered:
Hello, DEXseq team,
I am currently using DEXseq for alternative splicing analysis. After reading the official documents and my own practical application, I found that when the sample size exceeds 20, the calculation will always stop at the
DEXSeq()
function. At present,BPPARAM = MultiCoreParam()
has been used according to the document and genes with too many 0 values have been deleted.May I ask, can the
BatchJobsParam()
mentioned in the documentation for use with large samples provide instructions or examples for adapting to the DEXseq project?Thanks in advance for any suggestions.
The text was updated successfully, but these errors were encountered: