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extra_metadata.json
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extra_metadata.json
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{
"./":{
"license": "https://creativecommons.org/licenses/by/4.0/",
"title": "data_workspace",
"wasAssociatedWith":[
{"@id":"_:MatthiasObst"},
{"@id":"_:KatrinaExter"},
{"@id":"_:ChristinaPavloudi"}
],
"creator":[
{"@id":"_:MatthiasObst"},
{"@id":"_:KatrinaExter"},
{"@id":"_:ChristinaPavloudi"},
{"@id":"_:ARMSProject"},
{"@id":"_:AssemblePlus"}
],
"publisher":{"@id": "_:VLIZ"},
"ContactPoint":[
"opsci@vliz.be",
"matthias.obst@marine.gu.se"
],
"description":"The data workspace: ARMS-MBON data are harvested, quality controlled, and combined",
"keywords":[
"sample",
"measurement",
"biodiversity",
"long-term-changes",
"marine-environment",
"genetics",
"benthic-communities"
],
"dcat:theme":[
{"@id":"http://semanticscience.org/resource/SIO_001050"},
{"@id":"http://purl.obolibrary.org/obo/ExO_0000067"},
{"@id":"https://vocabularyserver.com/asfa/?tema=2185"},
{"@id":"https://vocabularyserver.com/asfa/?tema=3505"},
{"@id":"https://vocabularyserver.com/asfa/?tema=1150"},
{"@id":"https://vocabularyserver.com/asfa/?tema=2365"},
{"@id":"https://vocabularyserver.com/asfa/?tema=2091"}
]
},
"_:MatthiasObst":{
"@type":"Person",
"name":"Matthias Obst",
"email": "matthias.obst@marine.gu.se",
"identifier":"https://orcid.org/0000-0003-0264-9631"
},
"_:KatrinaExter":{
"@type":"Person",
"name":"Katrina Exter",
"email": "katrina.exter@vliz.be",
"identifier":"https://orcid.org/0000-0002-5911-1536"
},
"_:ChristinaPavloudi":{
"@type":"Person",
"name":"Christina Pavloudi",
"email": "cpavloud@hcmr.gr",
"identifier":"https://orcid.org/0000-0001-5106-6067"
},
"_:ARMSProject":{
"@type":"Project",
"name":"ARMS-MBON",
"identifier":"https://arms-mbon.eu"
},
"_:AssemblePlus":{
"@type":"Project",
"name":"ASSEMBLE Plus",
"identifier":"https://cordis.europa.eu/project/id/730984"
},
"_:VLIZ":{
"@type":"Organization",
"name":"Flanders Marine Institute",
"url":"https://www.vliz.be/en"
},
"./analysis_data/":{
"description": "The data files arising from analysis of the ARMS-MBON data (sequences and images)",
"startDate": "2018-01-01",
"endDate": "2023-10-10",
"downloadURL": "https://data.arms-mbon.org/data_workspace/latest/#./analysis_data/"
},
"./qualitycontrolled_data/":{
"description": "The metadata harvested from PlutoF and the ARMS Google Sheet, quality controlled, and combined",
"startDate": "2018-01-01",
"endDate": "2023-10-10",
"downloadURL": "https://data.arms-mbon.org/data_workspace/latest/#./qualitycontrolled_data/"
},
"./reformatted_data/":{
"description": "The combined data taken from qualitycontrolled_data and reformatted for particular end users (only of interest to the managers of ARMS-MBON)",
"startDate": "2018-01-01",
"endDate": "2023-10-10",
"downloadURL": "https://data.arms-mbon.org/data_workspace/latest/#./reformatted_data/"
},
"./Mapping_PlutoF_GS.csv":{
"encodingFormat": "text/csv",
"description": "The mapping of PlutoF metadata to the Google Sheet metadtata: used for our internal data-combining processes",
"startDate": "2018-01-01",
"endDate": "2023-10-10",
"downloadURL": "https://data.arms-mbon.org/data_workspace/latest/#./Mapping_PlutoF_GS.csv"
},
"./analysis_data/from_pema/":{
"description": "Selected input and output files arising from PEMA processing of ARMS-MBON data",
"startDate": "2018-01-01",
"endDate": "2023-10-10",
"wasInfluencedBy": "https://github.com/hariszaf/pema/tree/v.2.1.4",
"downloadURL": "https://data.arms-mbon.org/data_workspace/latest/#./analysis_data/from_pema/"
},
"./analysis_data/from_pema/processing_batch1/":{
"description": "Selected input and output files arising from PEMA processing of ARMS-MBON data (batch 1)",
"startDate": "2018-01-01",
"endDate": "2023-10-10",
"downloadURL": "https://data.arms-mbon.org/data_workspace/latest/#./analysis_data/from_pema/processing_batch1/"
},
"./analysis_data/from_pema/processing_batch1/fasta":{
"description": "The links to the archived fasta files arising from PEMA processing of ARMS-MBON data (batch 1)",
"startDate": "2018-01-01",
"endDate": "2023-10-10",
"downloadURL": "https://data.arms-mbon.org/data_workspace/latest/#./analysis_data/from_pema/processing_batch1/fasta"
},
"./analysis_data/from_pema/processing_batch1/taxonomic_assignments":{
"description": "The taxonomic assignments files arising from PEMA processing of ARMS-MBON data (batch 1)",
"startDate": "2018-01-01",
"endDate": "2023-10-10",
"downloadURL": "https://data.arms-mbon.org/data_workspace/latest/#./analysis_data/from_pema/processing_batch1/taxonomic_assignments"
},
"./analysis_data/from_pema/processing_batch1/pema_overview_batch1.xlsx":{
"encodingFormat": "application/vnd.openxmlformats-officedocument.spreadsheetml.sheet",
"description": "The PEMA overview file arising from PEMA processing of ARMS-MBON data (batch 1)",
"startDate": "2018-01-01",
"endDate": "2023-10-10",
"downloadURL": "https://data.arms-mbon.org/data_workspace/latest/#./analysis_data/from_pema/processing_batch1/pema_overview_batch1.xlsx"
},
"./qualitycontrolled_data/combined/":{
"description": "The combined data taken from qualitycontrolled_data and reformatted for particular end users (only of interest to the managers of ARMS-MBON)",
"startDate": "2018-01-01",
"endDate": "2023-10-10",
"wasDerivedFrom":[
"https://github.com/arms-mbon/data_workspace/tree/main/qualitycontrolled_data/from_gs",
"https://github.com/arms-mbon/data_workspace/tree/main/qualitycontrolled_data/from_plutof"
],
"downloadURL": "https://data.arms-mbon.org/data_workspace/combined/"
},
"./qualitycontrolled_data/from_gs/":{
"description": "The harvested and quality controlled metadata from the ARMS-MBON Google Sheets",
"startDate": "2018-01-01",
"endDate": "2023-10-10",
"wasDerivedFrom":"https://docs.google.com/spreadsheets/d/1j3yuY5lmoPMo91w6e3kkJ6pmp1X6FVGUtLealuKJ3wE",
"downloadURL": "https://arms-mbon.github.io/data_workspace/latest/#./qualitycontrolled_data/from_gs/"
},
"./qualitycontrolled_data/from_plutof/":{
"description": "The harvested and quality controlled metadata from the ARMS-MBON PlutoF project account",
"startDate": "2018-01-01",
"endDate": "2023-10-10",
"wasDerivedFrom":"https://app.plutof.ut.ee/study/view/81139",
"downloadURL": "https://arms-mbon.github.io/data_workspace/latest/#./qualitycontrolled_data/from_plutof/"
},
"./qualitycontrolled_data/Mapping_PlutoF_GS.csv":{
"encodingFormat": "text/csv",
"description": "The mapping of PlutoF metadata to the Google Sheet metadtata: used for our internal data-combining processes",
"startDate": "2018-01-01",
"endDate": "2023-10-10",
"downloadURL": "https://arms-mbon.github.io/data_workspace/latest/#./qualitycontrolled_data/Mapping_PlutoF_GS.csv"
},
"./reformatted_data/imis/":{
"description": "The combined data taken from qualitycontrolled_data and reformatted for submission to IMIS",
"startDate": "2018-01-01",
"endDate": "2023-10-10",
"wasDerivedFrom":[
"https://github.com/arms-mbon/data_workspace/tree/main/qualitycontrolled_data/combined",
"https://github.com/arms-mbon/data_workspace/tree/main/analysis_data/from_pema/processing_batch1"
],
"downloadURL": "https://arms-mbon.github.io/data_workspace/latest/#./reformatted_data/imis"
},
"./reformatted_data/lifewatch/":{
"description": "The combined data taken from qualitycontrolled_data and reformatted for use in the ARMS workflow in the Tesseract",
"startDate": "2018-01-01",
"endDate": "2023-10-10",
"wasDerivedFrom":[
"https://github.com/arms-mbon/data_workspace/tree/main/qualitycontrolled_data/combined",
"https://github.com/arms-mbon/data_workspace/tree/main/analysis_data/from_pema/processing_batch1"
],
"downloadURL": "https://arms-mbon.github.io/data_workspace/latest/#./reformatted_data/lifewatch"
}
}