LICENSE.txt

The STOPGAP data and code are distributed under the terms of the Creative 
Commons Attribution-ShareAlike 4.0 International License (CC BY-SA 4.0): 
https://creativecommons.org/licenses/by-sa/4.0/

Source datasets are distributed under their own licenses:
- EBI GWAS Catalog (https://www.ebi.ac.uk/gwas/) is used in compliance with 
  EBI Terms of Use (http://www.ebi.ac.uk/about/terms-of-use).
- GRASP (https://grasp.nhlbi.nih.gov/) is used in compliance with their terms 
  of use (https://grasp.nhlbi.nih.gov/Terms.aspx).
- GWASdb (http://jjwanglab.org/gwasdb/) is made available for research purposes
  (see "About" tab from the main website for details).
- PheWAS Catalog (https://phewascatalog.org/) is provided without any 
  associated licence information.
- Orphanet (http://www.orpha.net/) is restricted to OrphaData that are freely 
  available (http://www.orphadata.org/cgi-bin/index.php)
- OMIM (https://www.omim.org/) data is governed by the OMIM Use Agreement
  (https://www.omim.org/help/agreement).  Redistribution under this license is 
  not permitted, and therefore these data are not available in the public data 
  release.
- FANTOM5 (http://fantom.gsc.riken.jp/5/) is licensed under a Creative 
  Commons Attribution 4.0 International License 
  (http://creativecommons.org/licenses/by/4.0/).
- Promoter capture Hi-C data 
  (http://www.ebi.ac.uk/arrayexpress/experiments/E-MTAB-2323/) is freely and 
  openly accessible to the scientific community.
- ENCODE ChIA-PET data 
  (https://www.encodeproject.org/matrix/?type=Experiment&searchTerm=chia-pet&replicates.library.biosample.biosample_type=immortalized+cell+line&y.limit=)
  is freely and openly accessible to the scientific community
  (https://www.encodeproject.org/about/data-access/).
- eQTL data from GTEX
  (http://www.gtexportal.org/home/datasets) places no restrictions on use or
  publication (http://www.gtexportal.org/home/documentationPage).
- The ENCODE DHS-promoter correlation data
  (http://hgdownload.soe.ucsc.edu/downloads.html#human) places no restrictions
  on use or publication (https://genome.ucsc.edu/license/)
- GENCODE data
  (http://www.gencodegenes.org/releases/current.html) is licensed under a
  Creative Commons Attribution-NonCommercial-NoDerivs 2.5 License (https://creativecommons.org/licenses/by-nc-nd/2.5/)
- CATO score
  (http://www.uwencode.org/proj/CATO/) is freely available for both public and
  commercial use with a few exceptions. (http://genome.uwencode.org/license/)
- Phylop data
  (http://hgdownload.cse.ucsc.edu/downloads.html) is freely available for both
  public and commercial use with a few exceptions. (http://genome.ucsc.edu/license/)
- deltaSVM data 
  (http://www.beerlab.org/deltasvm/) places no restrictions on use or
  publication.