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CARL RNA Environment

This is the CARL RNA environment that has been adapted from the Learning to Design RNA by Runge et. al. The code has been adapted from https://github.com/automl/learna with a carl wrapper written around the envionment.

Datasets

To download and build the datasets we report on in our publications, namely the Rfam-Taneda [Taneda, 2011] dataset and our three proposed datasets, Rfam-Learn-Train, Rfam-Learn-Validation and Rfam-Learn-Test, run the following command after installation of all requirements.

cd data
./download_and_build_rfam_learn.sh
./download_and_build_rfam_taneda.sh

This will download all files and save them into the data/ directory.