From 49c140354865c2f10b29509bcb2c8a5d0a306e22 Mon Sep 17 00:00:00 2001 From: Nick Hellemans Date: Sat, 28 Dec 2024 17:36:54 +0100 Subject: [PATCH] v3 --- jest.config.js | 18 + package-lock.json | 10366 ++++++++++++---- package.json | 9 +- src/api/shared/classes/Calculation.ts | 85 + .../shared/services/calculations.service.ts | 15 +- .../v1/controllers/calculations.controller.ts | 14 + .../v2/controllers/calculations.controller.ts | 9 + src/calculation_suite/PARAMETERS.ts | 18 - .../10_meter_walk_test.test.ts | 114 +- .../10_meter_walk_test/10_meter_walk_test.ts | 82 +- .../definition/10_meter_walk_test_inputs.ts | 7 + .../definition/10_meter_walk_test_output.ts | 21 +- .../10_meter_walk_test/definition/index.ts | 5 +- .../calculations/acro/acro.test.ts | 225 +- .../calculations/acro/acro.ts | 83 +- .../acro/definition/acro_inputs.ts | 42 + .../acro/definition/acro_output.ts | 26 +- .../calculations/acro/definition/index.ts | 2 +- .../acro/helpers/calculate_scores.ts | 28 +- .../calculations/age_calc/age_calc.test.ts | 32 +- .../calculations/age_calc/age_calc.ts | 77 +- .../age_calc/definition/age_calc_inputs.ts | 5 + .../age_calc/definition/age_calc_output.ts | 11 +- .../calculations/age_calc/definition/index.ts | 2 +- .../calculations/asrs/asrs.test.ts | 226 +- .../calculations/asrs/asrs.ts | 105 +- .../asrs/definition/asrs_inputs.ts | 32 + .../asrs/definition/asrs_output.ts | 36 +- .../calculations/asrs/definition/index.ts | 2 +- .../asrs/helpers/calculate_part_scores.ts | 64 +- .../asrs/helpers/calculate_subscale_scores.ts | 63 +- .../calculations/audit/audit.test.ts | 32 +- .../calculations/beck/beck.test.ts | 102 +- .../calculations/beck/beck.ts | 89 +- .../beck/definition/beck_inputs.ts | 48 + .../beck/definition/beck_output.ts | 11 +- .../calculations/beck/definition/index.ts | 2 +- .../calculations/blcs/blcs.test.ts | 83 +- .../calculations/blcs/blcs.ts | 46 +- .../blcs/definition/blcs_inputs.ts | 30 + .../blcs/definition/blcs_output.ts | 11 +- .../calculations/blcs/definition/index.ts | 2 +- .../blcs/helpers/calculate_total_score.ts | 19 - .../calculations/blcs/helpers/index.ts | 1 - .../calculations/bmi/index.ts | 2 +- .../calculations/bmi/metric/bmi.schema.ts | 31 + .../calculations/bmi/metric/bmi.test.ts | 97 +- .../calculations/bmi/metric/bmi.ts | 89 +- .../calculations/bmi/metric/bmi_form.ts | 20 + .../bmi/metric/definition/bmi_inputs.ts | 40 - .../bmi/metric/definition/bmi_output.ts | 10 - .../bmi/metric/definition/index.ts | 2 - .../calculations/bmi/us/bmi.schema.ts | 32 + .../calculations/bmi/us/bmi.test.ts | 80 +- .../calculations/bmi/us/bmi.ts | 113 +- .../calculations/bmi/us/bmi_form.ts | 20 + .../bmi/us/definition/bmi_inputs.ts | 46 - .../bmi/us/definition/bmi_output.ts | 10 - .../calculations/bmi/us/definition/index.ts | 2 - .../calculations/bwcs/bwcs.test.ts | 82 +- .../calculations/bwcs/bwcs.ts | 46 +- .../bwcs/definition/bwcs_inputs.ts | 31 + .../bwcs/definition/bwcs_output.ts | 11 +- .../calculations/bwcs/definition/index.ts | 2 +- .../bwcs/helpers/calculate_total_score.ts | 19 - .../calculations/bwcs/helpers/index.ts | 1 - .../calculations/calculation_library.test.ts | 20 + .../calculations/calculation_library.ts | 470 +- .../calculations/calculation_library_v3.ts | 6 + .../calculations/cdlqi/cdlqi.test.ts | 58 +- .../calculations/shared_functions.ts | 54 - .../calculation_pipeline/README.md | 32 - .../create_calculation_pipeline.ts | 56 - .../index.ts | 1 - ...ation_output_to_wip_calculation_results.ts | 90 - .../index.ts | 1 - ...ts_against_calculation_input_definition.ts | 58 - .../validation/is_valid_input.ts | 129 - .../validation/rules/boolean_validation.ts | 22 - .../validation/rules/date_validation.ts | 28 - .../helpers/is_answer_between_given_range.ts | 5 - .../is_answer_one_of_the_allowed_answers.ts | 21 - .../validation/rules/index.ts | 6 - .../validation/rules/number_validation.ts | 67 - .../rules/numbers_array_validation.ts | 62 - .../validation/rules/string_validation.ts | 48 - .../rules/strings_array_validation.ts | 56 - .../api/input/lenses/allowedAnswersLens.ts | 6 - .../api/input/lenses/index.ts | 14 - .../api/input/lenses/inputFormatLens.ts | 5 - .../api/input/lenses/inputIdLens.ts | 5 - .../api/input/lenses/inputInfoLens.ts | 5 - .../api/input/lenses/inputInverseLens.ts | 5 - .../api/input/lenses/inputLabelLens.ts | 5 - .../api/input/lenses/inputRequiredLens.ts | 5 - .../api/input/lenses/inputTypeLens.ts | 5 - .../api/input/lenses/notApplicableIfLens.ts | 5 - .../input/lenses/notApplicableInputLens.ts | 8 - .../input/lenses/notApplicableScoreLens.ts | 8 - .../api/input/lenses/rangeLens.ts | 6 - .../api/input/lenses/rawInputValueLens.ts | 5 - .../api/input/lenses/stdInputValueLens.ts | 5 - .../api/subscale/lenses/index.ts | 7 - .../subscale/lenses/inputsInSubscaleLens.ts | 5 - .../api/subscale/lenses/labelLens.ts | 5 - .../subscale/lenses/notApplicableIfLens.ts | 5 - .../subscale/lenses/notApplicableScoreLens.ts | 8 - .../lenses/notApplicableSubscaleLens.ts | 8 - .../api/subscale/lenses/scoreLens.ts | 5 - .../api/subscale/lenses/subscaleIdLens.ts | 5 - .../add_response_values_to_subscale_inputs.ts | 25 - ..._standardized_values_to_subscale_inputs.ts | 68 - .../calculation_with_subscales/index.ts | 2 - .../shared/add_raw_values_to_inputs.ts | 26 - ..._all_required_inputs_have_a_valid_value.ts | 39 - .../simple_calculation/index.ts | 3 - .../create_calculation/create_calculation.ts | 63 - ...t_calculation_blueprint_from_definition.ts | 85 - .../index.ts | 1 - .../create_calculation/index.ts | 1 - .../execute_test_calculation.ts | 22 - .../execute_test_calculation/index.ts | 1 - .../get_result_ids_from_calculation_output.ts | 10 - .../index.ts | 1 - .../parse_readme_to_html/index.ts | 0 .../parse_readme_to_html.ts | 0 .../helper_functions/view_result/index.ts | 1 - .../view_result/view_result.ts | 21 - .../helper_functions/view_status/index.ts | 1 - .../view_status/view_status.ts | 21 - src/types/calculations.types.ts | 9 +- 131 files changed, 9349 insertions(+), 5567 deletions(-) create mode 100644 jest.config.js create mode 100644 src/api/shared/classes/Calculation.ts delete mode 100644 src/calculation_suite/PARAMETERS.ts delete mode 100644 src/calculation_suite/calculations/blcs/helpers/calculate_total_score.ts delete mode 100644 src/calculation_suite/calculations/blcs/helpers/index.ts create mode 100644 src/calculation_suite/calculations/bmi/metric/bmi.schema.ts create mode 100644 src/calculation_suite/calculations/bmi/metric/bmi_form.ts delete mode 100644 src/calculation_suite/calculations/bmi/metric/definition/bmi_inputs.ts delete mode 100644 src/calculation_suite/calculations/bmi/metric/definition/bmi_output.ts delete mode 100644 src/calculation_suite/calculations/bmi/metric/definition/index.ts create mode 100644 src/calculation_suite/calculations/bmi/us/bmi.schema.ts create mode 100644 src/calculation_suite/calculations/bmi/us/bmi_form.ts delete mode 100644 src/calculation_suite/calculations/bmi/us/definition/bmi_inputs.ts delete mode 100644 src/calculation_suite/calculations/bmi/us/definition/bmi_output.ts delete mode 100644 src/calculation_suite/calculations/bmi/us/definition/index.ts delete mode 100644 src/calculation_suite/calculations/bwcs/helpers/calculate_total_score.ts delete mode 100644 src/calculation_suite/calculations/bwcs/helpers/index.ts create mode 100644 src/calculation_suite/calculations/calculation_library_v3.ts delete mode 100644 src/calculation_suite/helper_functions/calculation_pipeline/README.md delete mode 100644 src/calculation_suite/helper_functions/calculation_pipeline/create_calculation_pipeline.ts delete mode 100644 src/calculation_suite/helper_functions/calculation_pipeline/map_calculation_output_to_wip_calculation_results/index.ts delete mode 100644 src/calculation_suite/helper_functions/calculation_pipeline/map_calculation_output_to_wip_calculation_results/map_calculation_output_to_wip_calculation_results.ts delete mode 100644 src/calculation_suite/helper_functions/calculation_pipeline/validate_calculation_inputs_against_calculation_input_definition/index.ts delete mode 100644 src/calculation_suite/helper_functions/calculation_pipeline/validate_calculation_inputs_against_calculation_input_definition/validate_calculation_inputs_against_calculation_input_definition.ts delete mode 100644 src/calculation_suite/helper_functions/calculation_pipeline/validate_calculation_inputs_against_calculation_input_definition/validation/is_valid_input.ts delete mode 100644 src/calculation_suite/helper_functions/calculation_pipeline/validate_calculation_inputs_against_calculation_input_definition/validation/rules/boolean_validation.ts delete mode 100644 src/calculation_suite/helper_functions/calculation_pipeline/validate_calculation_inputs_against_calculation_input_definition/validation/rules/date_validation.ts delete mode 100644 src/calculation_suite/helper_functions/calculation_pipeline/validate_calculation_inputs_against_calculation_input_definition/validation/rules/helpers/is_answer_between_given_range.ts delete mode 100644 src/calculation_suite/helper_functions/calculation_pipeline/validate_calculation_inputs_against_calculation_input_definition/validation/rules/helpers/is_answer_one_of_the_allowed_answers.ts delete mode 100644 src/calculation_suite/helper_functions/calculation_pipeline/validate_calculation_inputs_against_calculation_input_definition/validation/rules/index.ts delete mode 100644 src/calculation_suite/helper_functions/calculation_pipeline/validate_calculation_inputs_against_calculation_input_definition/validation/rules/number_validation.ts delete mode 100644 src/calculation_suite/helper_functions/calculation_pipeline/validate_calculation_inputs_against_calculation_input_definition/validation/rules/numbers_array_validation.ts delete mode 100644 src/calculation_suite/helper_functions/calculation_pipeline/validate_calculation_inputs_against_calculation_input_definition/validation/rules/string_validation.ts delete mode 100644 src/calculation_suite/helper_functions/calculation_pipeline/validate_calculation_inputs_against_calculation_input_definition/validation/rules/strings_array_validation.ts delete mode 100644 src/calculation_suite/helper_functions/calculation_variants/api/input/lenses/allowedAnswersLens.ts delete mode 100644 src/calculation_suite/helper_functions/calculation_variants/api/input/lenses/index.ts delete mode 100644 src/calculation_suite/helper_functions/calculation_variants/api/input/lenses/inputFormatLens.ts delete mode 100644 src/calculation_suite/helper_functions/calculation_variants/api/input/lenses/inputIdLens.ts delete mode 100644 src/calculation_suite/helper_functions/calculation_variants/api/input/lenses/inputInfoLens.ts delete mode 100644 src/calculation_suite/helper_functions/calculation_variants/api/input/lenses/inputInverseLens.ts delete mode 100644 src/calculation_suite/helper_functions/calculation_variants/api/input/lenses/inputLabelLens.ts delete mode 100644 src/calculation_suite/helper_functions/calculation_variants/api/input/lenses/inputRequiredLens.ts delete mode 100644 src/calculation_suite/helper_functions/calculation_variants/api/input/lenses/inputTypeLens.ts delete mode 100644 src/calculation_suite/helper_functions/calculation_variants/api/input/lenses/notApplicableIfLens.ts delete mode 100644 src/calculation_suite/helper_functions/calculation_variants/api/input/lenses/notApplicableInputLens.ts delete mode 100644 src/calculation_suite/helper_functions/calculation_variants/api/input/lenses/notApplicableScoreLens.ts delete mode 100644 src/calculation_suite/helper_functions/calculation_variants/api/input/lenses/rangeLens.ts delete mode 100644 src/calculation_suite/helper_functions/calculation_variants/api/input/lenses/rawInputValueLens.ts delete mode 100644 src/calculation_suite/helper_functions/calculation_variants/api/input/lenses/stdInputValueLens.ts delete mode 100644 src/calculation_suite/helper_functions/calculation_variants/api/subscale/lenses/index.ts delete mode 100644 src/calculation_suite/helper_functions/calculation_variants/api/subscale/lenses/inputsInSubscaleLens.ts delete mode 100644 src/calculation_suite/helper_functions/calculation_variants/api/subscale/lenses/labelLens.ts delete mode 100644 src/calculation_suite/helper_functions/calculation_variants/api/subscale/lenses/notApplicableIfLens.ts delete mode 100644 src/calculation_suite/helper_functions/calculation_variants/api/subscale/lenses/notApplicableScoreLens.ts delete mode 100644 src/calculation_suite/helper_functions/calculation_variants/api/subscale/lenses/notApplicableSubscaleLens.ts delete mode 100644 src/calculation_suite/helper_functions/calculation_variants/api/subscale/lenses/scoreLens.ts delete mode 100644 src/calculation_suite/helper_functions/calculation_variants/api/subscale/lenses/subscaleIdLens.ts delete mode 100644 src/calculation_suite/helper_functions/calculation_variants/calculation_with_subscales/add_response_values_to_subscale_inputs/add_response_values_to_subscale_inputs.ts delete mode 100644 src/calculation_suite/helper_functions/calculation_variants/calculation_with_subscales/add_standardized_values_to_subscale_inputs/add_standardized_values_to_subscale_inputs.ts delete mode 100644 src/calculation_suite/helper_functions/calculation_variants/calculation_with_subscales/index.ts delete mode 100644 src/calculation_suite/helper_functions/calculation_variants/shared/add_raw_values_to_inputs.ts delete mode 100644 src/calculation_suite/helper_functions/calculation_variants/shared/do_all_required_inputs_have_a_valid_value.ts delete mode 100644 src/calculation_suite/helper_functions/calculation_variants/simple_calculation/index.ts delete mode 100644 src/calculation_suite/helper_functions/create_calculation/create_calculation.ts delete mode 100644 src/calculation_suite/helper_functions/create_calculation/get_calculation_blueprint_from_definition/get_calculation_blueprint_from_definition.ts delete mode 100644 src/calculation_suite/helper_functions/create_calculation/get_calculation_blueprint_from_definition/index.ts delete mode 100644 src/calculation_suite/helper_functions/create_calculation/index.ts delete mode 100644 src/calculation_suite/helper_functions/execute_test_calculation/execute_test_calculation.ts delete mode 100644 src/calculation_suite/helper_functions/execute_test_calculation/index.ts delete mode 100644 src/calculation_suite/helper_functions/get_result_ids_from_calculation_output/get_result_ids_from_calculation_output.ts delete mode 100644 src/calculation_suite/helper_functions/get_result_ids_from_calculation_output/index.ts rename src/calculation_suite/helper_functions/{create_calculation => }/parse_readme_to_html/index.ts (100%) rename src/calculation_suite/helper_functions/{create_calculation => }/parse_readme_to_html/parse_readme_to_html.ts (100%) delete mode 100644 src/calculation_suite/helper_functions/view_result/index.ts delete mode 100644 src/calculation_suite/helper_functions/view_result/view_result.ts delete mode 100644 src/calculation_suite/helper_functions/view_status/index.ts delete mode 100644 src/calculation_suite/helper_functions/view_status/view_status.ts diff --git a/jest.config.js b/jest.config.js new file mode 100644 index 0000000..b8e2022 --- /dev/null +++ b/jest.config.js @@ -0,0 +1,18 @@ +module.exports = { + preset: 'ts-jest', + testEnvironment: 'node', // or 'jsdom' for browser-like environments + moduleFileExtensions: ['ts', 'tsx', 'js', 'jsx'], + testMatch: [ + '**/__tests__/**/*.(ts|tsx|js)', + '**/?(*.)+(spec|test).(ts|tsx|js)', + ], + transform: { + '^.+\\.(ts|tsx)$': 'ts-jest', + }, + globals: { + 'ts-jest': { + tsconfig: 'tsconfig.json', // Use your project's tsconfig + }, + }, + modulePathIgnorePatterns: ['dist'], +} diff --git a/package-lock.json b/package-lock.json index 617b0ec..85e89bb 100644 --- a/package-lock.json +++ b/package-lock.json @@ -28,12 +28,14 @@ "swagger-ui-express": "^4.5.0", "ts-node": "^10.9.1", "winston": "^3.8.2", - "winston-mongodb": "^5.1.0" + "winston-mongodb": "^5.1.0", + "zod": "^3.24.1" }, "devDependencies": { "@types/chai": "^4.3.3", "@types/cors": "^2.8.12", "@types/express": "^4.17.14", + "@types/jest": "^29.5.14", "@types/lodash": "^4.14.186", "@types/mocha": "^10.0.0", "@types/multer": "^1.4.7", @@ -51,82 +53,97 @@ "eslint-plugin-n": "^15.3.0", "eslint-plugin-promise": "^6.0.1", 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"sha512-kiGUalWN+rgBJ/1OHZsBtU4rXZOfj/7rKQxULKlIzwzQSvMJUUNgPwJEEh7gU6xEVxC0ahoOBvN2YI8GH6FNgA==", + "dev": true, + "requires": { + "@jridgewell/trace-mapping": "^0.3.12", + "@types/istanbul-lib-coverage": "^2.0.1", + "convert-source-map": "^2.0.0" + }, + "dependencies": { + "@jridgewell/trace-mapping": { + "version": "0.3.25", + "resolved": "https://registry.npmjs.org/@jridgewell/trace-mapping/-/trace-mapping-0.3.25.tgz", + "integrity": "sha512-vNk6aEwybGtawWmy/PzwnGDOjCkLWSD2wqvjGGAgOAwCGWySYXfYoxt00IJkTF+8Lb57DwOb3Aa0o9CApepiYQ==", + "dev": true, + "requires": { + "@jridgewell/resolve-uri": "^3.1.0", + "@jridgewell/sourcemap-codec": "^1.4.14" + } + } + } + }, "vary": { "version": "1.1.2", "resolved": "https://registry.npmjs.org/vary/-/vary-1.1.2.tgz", "integrity": "sha512-BNGbWLfd0eUPabhkXUVm0j8uuvREyTh5ovRa/dyow/BqAbZJyC+5fU+IzQOzmAKzYqYRAISoRhdQr3eIZ/PXqg==" }, + "walker": { + "version": "1.0.8", + "resolved": "https://registry.npmjs.org/walker/-/walker-1.0.8.tgz", + "integrity": "sha512-ts/8E8l5b7kY0vlWLewOkDXMmPdLcVV4GmOQLyxuSswIJsweeFZtAsMF7k1Nszz+TYBQrlYRmzOnr398y1JemQ==", + "dev": true, + "requires": { + "makeerror": "1.0.12" + } + }, "webidl-conversions": { "version": "7.0.0", "resolved": "https://registry.npmjs.org/webidl-conversions/-/webidl-conversions-7.0.0.tgz", @@ -10225,6 +15484,16 @@ "resolved": "https://registry.npmjs.org/wrappy/-/wrappy-1.0.2.tgz", "integrity": "sha512-l4Sp/DRseor9wL6EvV2+TuQn63dMkPjZ/sp9XkghTEbV9KlPS1xUsZ3u7/IQO4wxtcFB4bgpQPRcR3QCvezPcQ==" }, + "write-file-atomic": { + "version": "4.0.2", + "resolved": "https://registry.npmjs.org/write-file-atomic/-/write-file-atomic-4.0.2.tgz", + "integrity": "sha512-7KxauUdBmSdWnmpaGFg+ppNjKF8uNLry8LyzjauQDOVONfFLNKrKvQOxZ/VuTIcS/gge/YNahf5RIIQWTSarlg==", + "dev": true, + "requires": { + "imurmurhash": "^0.1.4", + "signal-exit": "^3.0.7" + } + }, "xtend": { "version": "4.0.2", "resolved": "https://registry.npmjs.org/xtend/-/xtend-4.0.2.tgz", @@ -10281,6 +15550,11 @@ "version": "0.1.0", "resolved": "https://registry.npmjs.org/yocto-queue/-/yocto-queue-0.1.0.tgz", "integrity": "sha512-rVksvsnNCdJ/ohGc6xgPwyN8eheCxsiLM8mxuE/t/mOVqJewPuO1miLpTHQiRgTKCLexL4MeAFVagts7HmNZ2Q==" + }, + "zod": { + "version": "3.24.1", + "resolved": "https://registry.npmjs.org/zod/-/zod-3.24.1.tgz", + "integrity": "sha512-muH7gBL9sI1nciMZV67X5fTKKBLtwpZ5VBp1vsOQzj1MhrBZ4wlVCm3gedKZWLp0Oyel8sIGfeiz54Su+OVT+A==" } } } diff --git a/package.json b/package.json index 53c8e4f..2aff57c 100644 --- a/package.json +++ b/package.json @@ -9,7 +9,8 @@ "lint": "eslint --ignore-path .eslintignore --ext .js,.ts .", "dev": "concurrently \"npx tsc --watch\" \"nodemon -q dist/server.js\"", "format": "prettier --ignore-path .gitignore --write \"**/*.+(js|ts|json)\"", - "test": "env TS_NODE_COMPILER_OPTIONS='{\"module\": \"commonjs\" }' mocha -r ts-node/register 'src/**/*.test.ts'" + "test": "env TS_NODE_COMPILER_OPTIONS='{\"module\": \"commonjs\" }' mocha -r ts-node/register 'src/**/*.test.ts'", + "test:jest": "jest" }, "precommit": [ "lint" @@ -37,12 +38,14 @@ "swagger-ui-express": "^4.5.0", "ts-node": "^10.9.1", "winston": "^3.8.2", - "winston-mongodb": "^5.1.0" + "winston-mongodb": "^5.1.0", + "zod": "^3.24.1" }, "devDependencies": { "@types/chai": "^4.3.3", "@types/cors": "^2.8.12", "@types/express": "^4.17.14", + "@types/jest": "^29.5.14", "@types/lodash": "^4.14.186", "@types/mocha": "^10.0.0", "@types/multer": "^1.4.7", @@ -60,9 +63,11 @@ "eslint-plugin-n": "^15.3.0", "eslint-plugin-promise": "^6.0.1", "eslint-plugin-unused-imports": "^2.0.0", + "jest": "^29.7.0", "nodemon": "^2.0.20", "pre-commit": "^1.2.2", "prettier": "^2.7.1", + "ts-jest": "^29.2.5", "typescript": "^4.8.4" } } diff --git a/src/api/shared/classes/Calculation.ts b/src/api/shared/classes/Calculation.ts new file mode 100644 index 0000000..90a4edc --- /dev/null +++ b/src/api/shared/classes/Calculation.ts @@ -0,0 +1,85 @@ +import { z } from 'zod' +import { isNil } from 'lodash' +import { LabelType } from '../../../types/localization.types' + +type CalculationOutputSchema = { + label: LabelType + type: z.ZodTypeAny + unit?: LabelType + interpretation?: LabelType + terminology?: unknown +} + +export type CalculationType< + InputSchema extends z.ZodObject>, + OutputSchema extends Record +> = { + name: string + readme_location: string + inputSchema: InputSchema + outputSchema: OutputSchema + formData?: { + [K in keyof z.infer]: unknown + } + calculate: CalculateFn['calculate'] +} + +type CalculateFn< + InputSchema extends z.ZodObject>, + OutputSchema extends Record +> = { + calculate?: (opts: { + data: z.infer + }) => Record< + keyof OutputSchema, + z.infer | null + > +} + +export class Calculation< + InputSchema extends z.ZodObject>, + OutputSchema extends Record +> implements Omit, 'calculate'> +{ + name: string + readme_location: string + inputSchema: InputSchema + outputSchema: OutputSchema + formData?: Record, unknown> + _calculate?: CalculateFn['calculate'] + + public constructor( + calculation: Omit, 'schema'> & { + inputSchema: InputSchema + outputSchema: OutputSchema + } + ) { + this.name = calculation.name + this.readme_location = calculation.readme_location + this.inputSchema = calculation.inputSchema + this.outputSchema = calculation.outputSchema + this.formData = calculation.formData + this._calculate = calculation.calculate + } + + /** + * We don't know the shape of the data when the class is instantiated. + * We need to parse the data before we can call the onCalculate function. + */ + calculate(opts: { + payload: unknown + }): Record< + keyof OutputSchema, + z.infer | null + > { + if (!isNil(this._calculate)) { + const parsedData = this.inputSchema.parse(opts.payload) + + return this._calculate({ + data: parsedData, + }) + } else { + throw new Error('Failed to calculate') + } + } +} diff --git a/src/api/shared/services/calculations.service.ts b/src/api/shared/services/calculations.service.ts index d31092f..7807417 100644 --- a/src/api/shared/services/calculations.service.ts +++ b/src/api/shared/services/calculations.service.ts @@ -16,18 +16,27 @@ import { filter_out_non_applicable_inputs, generate_random_calculation_input_based_on_calculation_parameters, } from '../utils' +import type { CalculationType as NewCalculationType } from '../classes/Calculation' /** * Only return calculations where `is_private` is set to false */ const get_public_calculations = (): CalculationsLibraryType => - R.filter(calculation => calculation.is_private === false, CALCULATIONS) + R.filter( + (calculation): calculation is CalculationType => + 'is_private' in calculation && calculation.is_private === false, + CALCULATIONS + ) /** * Only return calculations where `is_private` is set to true */ const get_private_calculations = (): CalculationsLibraryType => - R.filter(calculation => calculation.is_private === true, CALCULATIONS) + R.filter( + (calculation): calculation is CalculationType => + 'is_private' in calculation && calculation.is_private === true, + CALCULATIONS + ) /** * Return all calculations @@ -36,7 +45,7 @@ const get_all_calculations = (): CalculationsLibraryType => CALCULATIONS const get_calculation = ( calculation_id: CalculationScriptIdentifierType -): CalculationType | undefined => { +): CalculationType | NewCalculationType | undefined => { const calculation = CALCULATIONS[calculation_id] if (R.isNil(calculation)) return undefined diff --git a/src/api/v1/controllers/calculations.controller.ts b/src/api/v1/controllers/calculations.controller.ts index e43d0ac..ece8836 100644 --- a/src/api/v1/controllers/calculations.controller.ts +++ b/src/api/v1/controllers/calculations.controller.ts @@ -43,6 +43,12 @@ const get_calculation = async (req: Request, res: Response) => { return } + // Then it's a new calculation + if ('inputSchema' in requested_calculation) { + res.status(StatusCodes.OK).send(requested_calculation) + return + } + res.status(StatusCodes.OK).send( transform_single_calculation_for_api_response({ calculation_id, @@ -109,6 +115,10 @@ const execute_calculation = async (req: Request, res: Response) => { return } + if ('inputSchema' in requested_calculation) { + return + } + const casted_calculation_input = cast_incoming_calculation_input_to_exact_types({ calculation: requested_calculation, @@ -156,6 +166,10 @@ const simulate_calculation = async (req: Request, res: Response) => { return } + if ('inputSchema' in requested_calculation) { + return + } + const simulation = CalculationsService.simulate({ calculation: requested_calculation, calculation_id, diff --git a/src/api/v2/controllers/calculations.controller.ts b/src/api/v2/controllers/calculations.controller.ts index 2132c76..6a33c74 100644 --- a/src/api/v2/controllers/calculations.controller.ts +++ b/src/api/v2/controllers/calculations.controller.ts @@ -30,6 +30,15 @@ const execute_calculation = async (req: Request, res: Response) => { return } + if (!('calculation_name' in requested_calculation)) { + res.status(StatusCodes.BAD_REQUEST).send({ + error: { + message: `Awaiting update to v3`, + }, + }) + return + } + /** * Clincal App Support: * The Awell Score API is strictly typed in terms of the inputs it can receive for a calculation. diff --git a/src/calculation_suite/PARAMETERS.ts b/src/calculation_suite/PARAMETERS.ts deleted file mode 100644 index 62e57bf..0000000 --- a/src/calculation_suite/PARAMETERS.ts +++ /dev/null @@ -1,18 +0,0 @@ -import type { - CalculatedStatusType, - MissingStatusType, - NotApplicableStatusType, -} from '../types/calculations.types' - -export type MissingScoreType = 'Missing' -export type NotApplicableScoreType = 'Not applicable' - -export const MISSING_MESSAGE: MissingScoreType = 'Missing' -export const NOT_APPLICABLE_MESSAGE: NotApplicableScoreType = 'Not applicable' - -export const CALCULATED_STATUS: CalculatedStatusType = 'CALCULATED' -export const MISSING_STATUS: MissingStatusType = 'MISSING' -export const NOT_APPLICABLE_STATUS: NotApplicableStatusType = 'NOT APPLICABLE' - -export const MISSING_SCORE = undefined -export const NOT_APPLICBALE_SCORE = undefined diff --git a/src/calculation_suite/calculations/10_meter_walk_test/10_meter_walk_test.test.ts b/src/calculation_suite/calculations/10_meter_walk_test/10_meter_walk_test.test.ts index 0274023..493c8c4 100644 --- a/src/calculation_suite/calculations/10_meter_walk_test/10_meter_walk_test.test.ts +++ b/src/calculation_suite/calculations/10_meter_walk_test/10_meter_walk_test.test.ts @@ -1,19 +1,11 @@ import { expect } from 'chai' -import { InvalidInputsError } from '../../errors' -import { execute_test_calculation } from '../../helper_functions/execute_test_calculation' -import { get_result_ids_from_calculation_output } from '../../helper_functions/get_result_ids_from_calculation_output' -import { view_result } from '../../helper_functions/view_result' -import { MISSING_STATUS } from '../../PARAMETERS' import { CALCULATIONS } from '../calculation_library' -import { - get_input_ids_from_calculation_blueprint, - view_status, -} from '../shared_functions' import { ten_meter_walk_test } from './10_meter_walk_test' -import { TEN_METER_WALK_TEST_INPUTS } from './definition/10_meter_walk_test_inputs' +import { Calculation } from '../../../api/shared/classes/Calculation' +import { ZodError } from 'zod' -const tmwt_calculation = execute_test_calculation(ten_meter_walk_test) +const tmwt_calculation = new Calculation(ten_meter_walk_test) describe('ten_meter_walk_test', function () { it('ten_meter_walk_test calculation function should be available as a calculation', function () { @@ -22,13 +14,15 @@ describe('ten_meter_walk_test', function () { describe('specific_steps_ten_meter_walk_test_calc', function () { describe('basic assumptions', function () { - const outcome = tmwt_calculation({ - TRIAL_1: 10, + const outcome = tmwt_calculation.calculate({ + payload: { + TRIAL_1: 10, + }, }) it('should return 3 calculation results', function () { const AMOUNT_OF_RESULTS = 3 - expect(outcome).to.have.length(AMOUNT_OF_RESULTS) + expect(Object.keys(outcome)).to.have.length(AMOUNT_OF_RESULTS) }) it('should the calculation names', function () { @@ -38,8 +32,7 @@ describe('ten_meter_walk_test', function () { 'TMWT_MEAN_IN_KILOMETERS_PER_HOUR', ] - const EXTRACTED_CALCULATION_IDS_FROM_RESULT = - get_result_ids_from_calculation_output(outcome) + const EXTRACTED_CALCULATION_IDS_FROM_RESULT = Object.keys(outcome) expect(EXTRACTED_CALCULATION_IDS_FROM_RESULT).to.eql( EXPECTED_CALCULATION_IDS @@ -51,8 +44,9 @@ describe('ten_meter_walk_test', function () { describe('the score includes the correct input fields', function () { it('should have all the expected input ids configured', function () { const EXPECTED_INPUT_IDS = ['TRIAL_1', 'TRIAL_2', 'TRIAL_3'] - const configured_calculation_input_ids = - get_input_ids_from_calculation_blueprint(TEN_METER_WALK_TEST_INPUTS) + const configured_calculation_input_ids = Object.keys( + tmwt_calculation.inputSchema.shape + ) expect(EXPECTED_INPUT_IDS).to.eql(configured_calculation_input_ids) }) @@ -62,46 +56,22 @@ describe('ten_meter_walk_test', function () { describe('when an answer is not a number', function () { it('should throw an error', function () { expect(() => - tmwt_calculation({ - TRIAL_1: 'hello', + tmwt_calculation.calculate({ + payload: { + TRIAL_1: 'hello', + }, }) - ).to.throw(InvalidInputsError) + ).to.throw(ZodError) }) }) describe('when the response is empty', function () { - const outcome = tmwt_calculation({}) - - it('should return undefined result & missing status as the mean in seconds', function () { - const result = view_result('TMWT_MEAN_IN_SECONDS')(outcome) - const status = view_status('TMWT_MEAN_IN_SECONDS')(outcome) - - expect(result).to.eql(undefined) - expect(status).to.eql(MISSING_STATUS) - }) - - it('should return undefined result & missing status as the mean in meters per second', function () { - const result = view_result('TMWT_MEAN_IN_METERS_PER_SECOND')( - outcome - ) - const status = view_status('TMWT_MEAN_IN_METERS_PER_SECOND')( - outcome - ) - - expect(result).to.eql(undefined) - expect(status).to.eql(MISSING_STATUS) - }) - - it('should return undefined result & missing status for as the mean in kilometers per hour', function () { - const result = view_result('TMWT_MEAN_IN_KILOMETERS_PER_HOUR')( - outcome - ) - const status = view_status('TMWT_MEAN_IN_KILOMETERS_PER_HOUR')( - outcome - ) - - expect(result).to.eql(undefined) - expect(status).to.eql(MISSING_STATUS) + it('should throw an error', function () { + expect(() => + tmwt_calculation.calculate({ + payload: {}, + }) + ).to.throw(ZodError) }) }) }) @@ -109,52 +79,54 @@ describe('ten_meter_walk_test', function () { describe('score calculation', function () { describe('when called with a single trial', function () { - const outcome = tmwt_calculation({ - TRIAL_1: 7, // Took the patient 7 seconds to walk 10 meters + const outcome = tmwt_calculation.calculate({ + payload: { + TRIAL_1: 7, // Took the patient 7 seconds to walk 10 meters + }, }) it('should return the correct result for the mean in seconds', function () { - const score = view_result('TMWT_MEAN_IN_SECONDS')(outcome) const EXPECTED_RESULT = 7 - expect(score).to.eql(EXPECTED_RESULT) + expect(outcome.TMWT_MEAN_IN_SECONDS).to.eql(EXPECTED_RESULT) }) it('should return the correct result for the mean in meters per second', function () { - const score = view_result('TMWT_MEAN_IN_METERS_PER_SECOND')(outcome) const EXPECTED_RESULT = 1.43 - expect(score).to.eql(EXPECTED_RESULT) + expect(outcome.TMWT_MEAN_IN_METERS_PER_SECOND).to.eql(EXPECTED_RESULT) }) it('should return the correct result for the mean in kilometers per hour', function () { - const score = view_result('TMWT_MEAN_IN_KILOMETERS_PER_HOUR')(outcome) const EXPECTED_RESULT = 5.14 - expect(score).to.eql(EXPECTED_RESULT) + expect(outcome.TMWT_MEAN_IN_KILOMETERS_PER_HOUR).to.eql( + EXPECTED_RESULT + ) }) }) describe('when called with multiple trials', function () { - const outcome = tmwt_calculation({ - TRIAL_1: 7, // Took the patient 7 seconds to walk 10 meters in trial 1 - TRIAL_2: 8, // Took the patient 8 seconds to walk 10 meters in trial 2 - TRIAL_3: 6, // Took the patient 6 seconds to walk 10 meters in trial 3 + const outcome = tmwt_calculation.calculate({ + payload: { + TRIAL_1: 7, // Took the patient 7 seconds to walk 10 meters in trial 1 + TRIAL_2: 8, // Took the patient 8 seconds to walk 10 meters in trial 2 + TRIAL_3: 6, // Took the patient 6 seconds to walk 10 meters in trial 3 + }, }) it('should return the correct result for the mean in seconds', function () { - const score = view_result('TMWT_MEAN_IN_SECONDS')(outcome) const EXPECTED_RESULT = 7 - expect(score).to.eql(EXPECTED_RESULT) + expect(outcome.TMWT_MEAN_IN_SECONDS).to.eql(EXPECTED_RESULT) }) it('should return the correct result for the mean in meters per second', function () { - const score = view_result('TMWT_MEAN_IN_METERS_PER_SECOND')(outcome) const EXPECTED_RESULT = 1.43 - expect(score).to.eql(EXPECTED_RESULT) + expect(outcome.TMWT_MEAN_IN_METERS_PER_SECOND).to.eql(EXPECTED_RESULT) }) it('should return the correct result for the mean in kilometers per hour', function () { - const score = view_result('TMWT_MEAN_IN_KILOMETERS_PER_HOUR')(outcome) const EXPECTED_RESULT = 5.14 - expect(score).to.eql(EXPECTED_RESULT) + expect(outcome.TMWT_MEAN_IN_KILOMETERS_PER_HOUR).to.eql( + EXPECTED_RESULT + ) }) }) }) diff --git a/src/calculation_suite/calculations/10_meter_walk_test/10_meter_walk_test.ts b/src/calculation_suite/calculations/10_meter_walk_test/10_meter_walk_test.ts index 50bb61e..b8bd536 100644 --- a/src/calculation_suite/calculations/10_meter_walk_test/10_meter_walk_test.ts +++ b/src/calculation_suite/calculations/10_meter_walk_test/10_meter_walk_test.ts @@ -1,45 +1,33 @@ -import { round } from 'mathjs' import R from 'ramda' - -import type { - CalculationType, - InputType, - WIPCalculationResultType, -} from '../../../types/calculations.types' -import { - add_raw_values_to_inputs, - get_valid_values, -} from '../../helper_functions/calculation_variants/simple_calculation' -import { create_calculation } from '../../helper_functions/create_calculation' -import { MISSING_MESSAGE } from '../../PARAMETERS' +import { round } from 'mathjs' +import { CalculationType } from '../../../api/shared/classes/Calculation' import { - TEN_METER_WALK_TEST_INPUTS, + TEN_METER_WALK_TEST_INPUT_SCHEMA, TEN_METER_WALK_TEST_OUTPUT, } from './definition' -const calculate_scores = ( - questions_with_answers: Array -): WIPCalculationResultType => { - let MEAN_IN_SECONDS_RESULT: string | number = MISSING_MESSAGE - let MEAN_IN_METERS_PER_SECOND_RESULT: string | number = MISSING_MESSAGE - let MEAN_IN_KILOMETERS_PER_HOUR_RESULT: string | number = MISSING_MESSAGE - - const VALID_TRIALS = get_valid_values(questions_with_answers) - - if (VALID_TRIALS.length > 0) { +export const ten_meter_walk_test: CalculationType< + typeof TEN_METER_WALK_TEST_INPUT_SCHEMA, + typeof TEN_METER_WALK_TEST_OUTPUT +> = { + name: '10 Metre Walk Test (TMWT)', + readme_location: __dirname, + inputSchema: TEN_METER_WALK_TEST_INPUT_SCHEMA, + outputSchema: TEN_METER_WALK_TEST_OUTPUT, + calculate: ({ data }) => { const DISTANCE_PER_TRIAL = 10 // 10 meters per trial - const TOTAL_DISTANCE = VALID_TRIALS.length * DISTANCE_PER_TRIAL - const TOTAL_TIME = R.sum(VALID_TRIALS) + const TOTAL_DISTANCE = Object.values(data).length * DISTANCE_PER_TRIAL + const TOTAL_TIME = R.sum(Object.values(data)) const ROUND_TO = 2 - MEAN_IN_SECONDS_RESULT = round(R.mean(VALID_TRIALS), ROUND_TO) + const MEAN_IN_SECONDS_RESULT = round(R.mean(Object.values(data)), ROUND_TO) /** * Calculate average speed in meters per second */ const WIP_MEAN_IN_METERS_PER_SECOND_RESULT = TOTAL_DISTANCE / TOTAL_TIME - MEAN_IN_METERS_PER_SECOND_RESULT = round( + const MEAN_IN_METERS_PER_SECOND_RESULT = round( WIP_MEAN_IN_METERS_PER_SECOND_RESULT, ROUND_TO ) @@ -48,39 +36,15 @@ const calculate_scores = ( * Calculate average speed in kilometers per hour */ const CONVERSION_FACTOR = 3.6 // 1m per second = 3.6km per hour - MEAN_IN_KILOMETERS_PER_HOUR_RESULT = round( + const MEAN_IN_KILOMETERS_PER_HOUR_RESULT = round( WIP_MEAN_IN_METERS_PER_SECOND_RESULT * CONVERSION_FACTOR, ROUND_TO ) - } - - return [ - { - id: 'TMWT_MEAN_IN_SECONDS', - score: MEAN_IN_SECONDS_RESULT, - }, - { - id: 'TMWT_MEAN_IN_METERS_PER_SECOND', - score: MEAN_IN_METERS_PER_SECOND_RESULT, - }, - { - id: 'TMWT_MEAN_IN_KILOMETERS_PER_HOUR', - score: MEAN_IN_KILOMETERS_PER_HOUR_RESULT, - }, - ] -} -export const specific_steps_ten_meter_walk_test_calc = [ - calculate_scores, - add_raw_values_to_inputs(TEN_METER_WALK_TEST_INPUTS), -] - -export const ten_meter_walk_test: CalculationType = create_calculation({ - calculation_name: '10 Metre Walk Test (TMWT)', - readme_location: __dirname, - calculation_steps: specific_steps_ten_meter_walk_test_calc, - calculation_definition: { - input_definition: TEN_METER_WALK_TEST_INPUTS, - output_definition: TEN_METER_WALK_TEST_OUTPUT, + return { + TMWT_MEAN_IN_SECONDS: MEAN_IN_SECONDS_RESULT, + TMWT_MEAN_IN_METERS_PER_SECOND: MEAN_IN_METERS_PER_SECOND_RESULT, + TMWT_MEAN_IN_KILOMETERS_PER_HOUR: MEAN_IN_KILOMETERS_PER_HOUR_RESULT, + } }, -}) +} diff --git a/src/calculation_suite/calculations/10_meter_walk_test/definition/10_meter_walk_test_inputs.ts b/src/calculation_suite/calculations/10_meter_walk_test/definition/10_meter_walk_test_inputs.ts index 85fee5f..440f2e7 100644 --- a/src/calculation_suite/calculations/10_meter_walk_test/definition/10_meter_walk_test_inputs.ts +++ b/src/calculation_suite/calculations/10_meter_walk_test/definition/10_meter_walk_test_inputs.ts @@ -1,3 +1,4 @@ +import { z } from 'zod' import type { InputType } from '../../../../types/calculations.types' export const TEN_METER_WALK_TEST_INPUTS: Array = [ @@ -32,3 +33,9 @@ export const TEN_METER_WALK_TEST_INPUTS: Array = [ }, }, ] + +export const TEN_METER_WALK_TEST_INPUT_SCHEMA = z.object({ + TRIAL_1: z.number(), + TRIAL_2: z.number().optional(), + TRIAL_3: z.number().optional(), +}) diff --git a/src/calculation_suite/calculations/10_meter_walk_test/definition/10_meter_walk_test_output.ts b/src/calculation_suite/calculations/10_meter_walk_test/definition/10_meter_walk_test_output.ts index c524a3d..fd14802 100644 --- a/src/calculation_suite/calculations/10_meter_walk_test/definition/10_meter_walk_test_output.ts +++ b/src/calculation_suite/calculations/10_meter_walk_test/definition/10_meter_walk_test_output.ts @@ -1,28 +1,25 @@ -import type { CalculationOutputDefinition } from '../../../../types/calculations.types' +import { z } from 'zod' -export const TEN_METER_WALK_TEST_OUTPUT: CalculationOutputDefinition[] = [ - { - subresult_id: 'TMWT_MEAN_IN_SECONDS', +export const TEN_METER_WALK_TEST_OUTPUT = { + TMWT_MEAN_IN_SECONDS: { label: { en: 'Mean in seconds', nl: 'Gemiddelde in seconden' }, - type: 'number', + type: z.number(), unit: { en: 'sec' }, }, - { - subresult_id: 'TMWT_MEAN_IN_METERS_PER_SECOND', + TMWT_MEAN_IN_METERS_PER_SECOND: { label: { en: 'Mean in meters per second', nl: 'Gemiddelde in meter per seconde', }, - type: 'number', + type: z.number(), unit: { en: 'm/sec' }, }, - { - subresult_id: 'TMWT_MEAN_IN_KILOMETERS_PER_HOUR', + TMWT_MEAN_IN_KILOMETERS_PER_HOUR: { label: { en: 'Mean in kilometers per hour', nl: 'Gemiddelde in kilometer per uur', }, - type: 'number', + type: z.number(), unit: { en: 'km/u' }, }, -] +} diff --git a/src/calculation_suite/calculations/10_meter_walk_test/definition/index.ts b/src/calculation_suite/calculations/10_meter_walk_test/definition/index.ts index 9bae8b7..125d2d7 100644 --- a/src/calculation_suite/calculations/10_meter_walk_test/definition/index.ts +++ b/src/calculation_suite/calculations/10_meter_walk_test/definition/index.ts @@ -1,2 +1,5 @@ -export { TEN_METER_WALK_TEST_INPUTS } from './10_meter_walk_test_inputs' +export { + TEN_METER_WALK_TEST_INPUTS, + TEN_METER_WALK_TEST_INPUT_SCHEMA, +} from './10_meter_walk_test_inputs' export { TEN_METER_WALK_TEST_OUTPUT } from './10_meter_walk_test_output' diff --git a/src/calculation_suite/calculations/acro/acro.test.ts b/src/calculation_suite/calculations/acro/acro.test.ts index c9985d0..25c17cc 100644 --- a/src/calculation_suite/calculations/acro/acro.test.ts +++ b/src/calculation_suite/calculations/acro/acro.test.ts @@ -1,13 +1,6 @@ import { expect } from 'chai' -import { InvalidInputsError } from '../../errors' -import { execute_test_calculation } from '../../helper_functions/execute_test_calculation' -import { get_result_ids_from_calculation_output } from '../../helper_functions/get_result_ids_from_calculation_output' -import { view_result } from '../../helper_functions/view_result' -import { view_status } from '../../helper_functions/view_status' -import { MISSING_STATUS } from '../../PARAMETERS' import { CALCULATIONS } from '../calculation_library' -import { get_input_ids_from_calculation_blueprint } from '../shared_functions' import { best_response, median_response, @@ -15,9 +8,11 @@ import { worst_response, } from './__testdata__/acro_test_responses' import { acro } from './acro' -import { ACRO_INPUTS, ACRO_SUBSCALES } from './definition' +import { ACRO_SUBSCALES } from './definition' +import { Calculation } from '../../../api/shared/classes/Calculation' +import { ZodError } from 'zod' -const acro_calculation = execute_test_calculation(acro) +const acro_calculation = new Calculation(acro) describe('acro', function () { it('acro calculation function should be available as a calculation', function () { @@ -25,7 +20,7 @@ describe('acro', function () { }) describe('basic assumptions', function () { - const outcome = acro_calculation(best_response) + const outcome = acro_calculation.calculate({ payload: best_response }) it('should have the expected result ids', function () { const EXPECTED_RESULT_IDS = [ @@ -34,8 +29,7 @@ describe('acro', function () { 'ACRO_PSYCHOLOGICAL_APPEARANCE_SUBSCALE', 'ACRO_PSYCHOLOGICAL_PERSONAL_RELATIONSHIPS_SUBSCALE', ] - const configured_calculation_ids = - get_result_ids_from_calculation_output(outcome) + const configured_calculation_ids = Object.keys(outcome) expect(configured_calculation_ids).to.eql(EXPECTED_RESULT_IDS) }) }) @@ -68,8 +62,9 @@ describe('acro', function () { 'Q22', ] - const configured_input_ids = - get_input_ids_from_calculation_blueprint(ACRO_INPUTS) + const configured_input_ids = Object.keys( + acro_calculation.inputSchema.shape + ) expect(EXPECTED_INPUT_IDS).to.eql(configured_input_ids) }) @@ -132,133 +127,99 @@ describe('acro', function () { describe('when an answer is below the expected range', function () { it('should throw an InvalidInputsError', function () { expect(() => - acro_calculation({ - Q01: -1, + acro_calculation.calculate({ + payload: { + Q01: -1, + }, }) - ).to.throw(InvalidInputsError) + ).to.throw(ZodError) }) }) describe('when an answer is above the expected range', function () { it('should throw an InvalidInputsError', function () { expect(() => - acro_calculation({ - Q01: 6, + acro_calculation.calculate({ + payload: { + Q01: 6, + }, }) - ).to.throw(InvalidInputsError) + ).to.throw(ZodError) }) }) describe('when there are non-numerical answers', function () { it('should throw an InvalidInputsError', function () { expect(() => - acro_calculation({ - Q01: "I'm not a number", + acro_calculation.calculate({ + payload: { + Q01: "I'm not a number", + }, }) - ).to.throw(InvalidInputsError) + ).to.throw(ZodError) }) }) describe('when called with an empty response', function () { - const outcome = acro_calculation({}) + const outcome = acro_calculation.calculate({ payload: {} }) describe('Global score', function () { it('should return missing for the result status and undefined score', function () { - const status = view_status('ACRO_GLOBAL_SCORE')(outcome) - const score = view_result('ACRO_GLOBAL_SCORE')(outcome) - - expect(score).to.eql(undefined) - expect(status).to.eql(MISSING_STATUS) + expect(outcome.ACRO_GLOBAL_SCORE).to.eql(null) }) }) describe('Physical subscale', function () { it('should return missing for the result status and undefined score', function () { - const score = view_result('ACRO_PHYSICAL_SUBSCALE_SCORE')(outcome) - const status = view_status('ACRO_PHYSICAL_SUBSCALE_SCORE')(outcome) - - expect(score).to.eql(undefined) - expect(status).to.eql(MISSING_STATUS) + expect(outcome.ACRO_PHYSICAL_SUBSCALE_SCORE).to.eql(null) }) }) describe('Psychological appearance subscale score subscale', function () { it('should return missing for the result status and undefined score', function () { - const score = view_result('ACRO_PSYCHOLOGICAL_APPEARANCE_SUBSCALE')( - outcome - ) - const status = view_status('ACRO_PSYCHOLOGICAL_APPEARANCE_SUBSCALE')( - outcome - ) - - expect(score).to.eql(undefined) - expect(status).to.eql(MISSING_STATUS) + expect(outcome.ACRO_PSYCHOLOGICAL_APPEARANCE_SUBSCALE).to.eql(null) }) }) describe('Psychosocial personal relationships subscale', function () { it('should return missing for the result status and undefined score', function () { - const score = view_result( - 'ACRO_PSYCHOLOGICAL_PERSONAL_RELATIONSHIPS_SUBSCALE' - )(outcome) - const status = view_status( - 'ACRO_PSYCHOLOGICAL_PERSONAL_RELATIONSHIPS_SUBSCALE' - )(outcome) - - expect(score).to.eql(undefined) - expect(status).to.eql(MISSING_STATUS) + expect( + outcome.ACRO_PSYCHOLOGICAL_PERSONAL_RELATIONSHIPS_SUBSCALE + ).to.eql(null) }) }) }) describe('when called with a partial response', function () { - const outcome = acro_calculation({ - Q02: 1, // Belongs to psychological appearance subscale + const outcome = acro_calculation.calculate({ + payload: { + Q02: 1, // Belongs to psychological appearance subscale + }, }) describe('Total score', function () { it('should return the expected (partial) total score', function () { - const score = view_result('ACRO_GLOBAL_SCORE')(outcome) - const status = view_status('ACRO_GLOBAL_SCORE')(outcome) - expect(score).to.eql(undefined) - expect(status).to.eql(MISSING_STATUS) + expect(outcome.ACRO_GLOBAL_SCORE).to.eql(null) }) }) describe('Physical subscale', function () { it('should return missing for the result status and undefined score', function () { - const score = view_result('ACRO_PHYSICAL_SUBSCALE_SCORE')(outcome) - const status = view_status('ACRO_PHYSICAL_SUBSCALE_SCORE')(outcome) - - expect(score).to.eql(undefined) - expect(status).to.eql(MISSING_STATUS) + expect(outcome.ACRO_PHYSICAL_SUBSCALE_SCORE).to.eql(null) }) }) describe('Psychological appearance subscale', function () { it('should return missing for the result status and undefined score as the partial response', function () { - const score = view_result('ACRO_PSYCHOLOGICAL_APPEARANCE_SUBSCALE')( - outcome - ) - const status = view_status('ACRO_PSYCHOLOGICAL_APPEARANCE_SUBSCALE')( - outcome - ) - expect(score).to.eql(undefined) - expect(status).to.eql(MISSING_STATUS) + expect(outcome.ACRO_PSYCHOLOGICAL_APPEARANCE_SUBSCALE).to.eql(null) }) }) describe('Psychosocial personal relationships subscale', function () { it('should return missing for the result status and undefined score', function () { - const score = view_result( - 'ACRO_PSYCHOLOGICAL_PERSONAL_RELATIONSHIPS_SUBSCALE' - )(outcome) - const status = view_status( - 'ACRO_PSYCHOLOGICAL_PERSONAL_RELATIONSHIPS_SUBSCALE' - )(outcome) - - expect(score).to.eql(undefined) - expect(status).to.eql(MISSING_STATUS) + expect( + outcome.ACRO_PSYCHOLOGICAL_PERSONAL_RELATIONSHIPS_SUBSCALE + ).to.eql(null) }) }) }) @@ -266,160 +227,128 @@ describe('acro', function () { describe('score calculation', function () { describe('when called with the worst response', function () { - const outcome = acro_calculation(worst_response) + const outcome = acro_calculation.calculate({ + payload: worst_response, + }) describe('Total score', function () { it('should return the worst score', function () { - const score = view_result('ACRO_GLOBAL_SCORE')(outcome) - - expect(score).to.eql(0) + expect(outcome.ACRO_GLOBAL_SCORE).to.eql(0) }) }) describe('Physical subscale', function () { it('should return the worst score', function () { - const score = view_result('ACRO_PHYSICAL_SUBSCALE_SCORE')(outcome) - - expect(score).to.eql(0) + expect(outcome.ACRO_PHYSICAL_SUBSCALE_SCORE).to.eql(0) }) }) describe('Psychological appearance subscale', function () { it('should return the worst score', function () { - const score = view_result('ACRO_PSYCHOLOGICAL_APPEARANCE_SUBSCALE')( - outcome - ) - - expect(score).to.eql(0) + expect(outcome.ACRO_PSYCHOLOGICAL_APPEARANCE_SUBSCALE).to.eql(0) }) }) describe('Psychosocial personal relationships subscale', function () { it('should return the worst score', function () { - const score = view_result( - 'ACRO_PSYCHOLOGICAL_PERSONAL_RELATIONSHIPS_SUBSCALE' - )(outcome) - - expect(score).to.eql(0) + expect( + outcome.ACRO_PSYCHOLOGICAL_PERSONAL_RELATIONSHIPS_SUBSCALE + ).to.eql(0) }) }) }) describe('when called with the best response', function () { - const outcome = acro_calculation(best_response) + const outcome = acro_calculation.calculate({ + payload: best_response, + }) describe('Total score', function () { it('should return the best score', function () { - const score = view_result('ACRO_GLOBAL_SCORE')(outcome) - - expect(score).to.eql(100) + expect(outcome.ACRO_GLOBAL_SCORE).to.eql(100) }) }) describe('Physical subscale', function () { it('should return the best score', function () { - const score = view_result('ACRO_PHYSICAL_SUBSCALE_SCORE')(outcome) - - expect(score).to.eql(100) + expect(outcome.ACRO_PHYSICAL_SUBSCALE_SCORE).to.eql(100) }) }) describe('Psychological appearance subscale', function () { it('should return the best score', function () { - const score = view_result('ACRO_PSYCHOLOGICAL_APPEARANCE_SUBSCALE')( - outcome - ) - - expect(score).to.eql(100) + expect(outcome.ACRO_PSYCHOLOGICAL_APPEARANCE_SUBSCALE).to.eql(100) }) }) describe('Psychosocial personal relationships subscale', function () { it('should return the best score', function () { - const score = view_result( - 'ACRO_PSYCHOLOGICAL_PERSONAL_RELATIONSHIPS_SUBSCALE' - )(outcome) - - expect(score).to.eql(100) + expect( + outcome.ACRO_PSYCHOLOGICAL_PERSONAL_RELATIONSHIPS_SUBSCALE + ).to.eql(100) }) }) }) describe('when called with a median response', function () { - const outcome = acro_calculation(median_response) + const outcome = acro_calculation.calculate({ + payload: median_response, + }) describe('Total score', function () { it('should return the median score', function () { - const score = view_result('ACRO_GLOBAL_SCORE')(outcome) - - expect(score).to.eql(50) + expect(outcome.ACRO_GLOBAL_SCORE).to.eql(50) }) }) describe('Physical subscale', function () { it('should return the median score', function () { - const score = view_result('ACRO_PHYSICAL_SUBSCALE_SCORE')(outcome) - - expect(score).to.eql(50) + expect(outcome.ACRO_PHYSICAL_SUBSCALE_SCORE).to.eql(50) }) }) describe('Psychological appearance subscale', function () { it('should return the median score', function () { - const score = view_result('ACRO_PSYCHOLOGICAL_APPEARANCE_SUBSCALE')( - outcome - ) - - expect(score).to.eql(50) + expect(outcome.ACRO_PSYCHOLOGICAL_APPEARANCE_SUBSCALE).to.eql(50) }) }) describe('Psychosocial personal relationships subscale', function () { it('should return the median score', function () { - const score = view_result( - 'ACRO_PSYCHOLOGICAL_PERSONAL_RELATIONSHIPS_SUBSCALE' - )(outcome) - - expect(score).to.eql(50) + expect( + outcome.ACRO_PSYCHOLOGICAL_PERSONAL_RELATIONSHIPS_SUBSCALE + ).to.eql(50) }) }) }) describe('when called with the random response', function () { - const outcome = acro_calculation(random_response) + const outcome = acro_calculation.calculate({ + payload: random_response, + }) describe('Total score', function () { it('should return the exepected score', function () { - const score = view_result('ACRO_GLOBAL_SCORE')(outcome) - - expect(score).to.eql(53.41) + expect(outcome.ACRO_GLOBAL_SCORE).to.eql(53.41) }) }) describe('Physical subscale', function () { it('should return the exepected score', function () { - const score = view_result('ACRO_PHYSICAL_SUBSCALE_SCORE')(outcome) - - expect(score).to.eql(50) + expect(outcome.ACRO_PHYSICAL_SUBSCALE_SCORE).to.eql(50) }) }) describe('Psychological appearance subscale', function () { it('should return the exepected score', function () { - const score = view_result('ACRO_PSYCHOLOGICAL_APPEARANCE_SUBSCALE')( - outcome - ) - - expect(score).to.eql(67.86) + expect(outcome.ACRO_PSYCHOLOGICAL_APPEARANCE_SUBSCALE).to.eql(67.86) }) }) describe('Psychosocial personal relationships subscale', function () { it('should return the exepected score', function () { - const score = view_result( - 'ACRO_PSYCHOLOGICAL_PERSONAL_RELATIONSHIPS_SUBSCALE' - )(outcome) - - expect(score).to.eql(42.86) + expect( + outcome.ACRO_PSYCHOLOGICAL_PERSONAL_RELATIONSHIPS_SUBSCALE + ).to.eql(42.86) }) }) }) diff --git a/src/calculation_suite/calculations/acro/acro.ts b/src/calculation_suite/calculations/acro/acro.ts index 680f0c1..56b37e7 100644 --- a/src/calculation_suite/calculations/acro/acro.ts +++ b/src/calculation_suite/calculations/acro/acro.ts @@ -1,61 +1,30 @@ -import type { - CalculationType, - InputType, - WIPCalculationResultType, -} from '../../../types/calculations.types' -import { add_raw_values_to_inputs } from '../../helper_functions/calculation_variants/simple_calculation' -import { create_calculation } from '../../helper_functions/create_calculation' -import { ACRO_INPUTS, ACRO_OUTPUT } from './definition' +import { CalculationType } from '../../../api/shared/classes/Calculation' +import { InputSchema, ACRO_OUTPUT } from './definition' import { calculate_scores } from './helpers' -const calculate_all_scores = ( - inputs_with_answers: Array -): WIPCalculationResultType => { - const PHYSICAL_SUBSCALE_SCORE = calculate_scores( - inputs_with_answers, - 'PHYSICAL_SUBSCALE' - ) - const PSYCHOLOGICAL_APPEARANCE_SUBSCALE = calculate_scores( - inputs_with_answers, - 'PSYCHOLOGICAL_APPEARANCE_SUBSCALE' - ) - const PSYCHOLOGICAL_PERSONAL_RELATIONSHIPS_SUBSCALE = calculate_scores( - inputs_with_answers, - 'PSYCHOLOGICAL_PERSONAL_RELATIONSHIPS_SUBSCALE' - ) - const TOTAL_SCORE = calculate_scores(inputs_with_answers, 'TOTAL_SCORE') - - return [ - { - id: 'ACRO_GLOBAL_SCORE', - score: TOTAL_SCORE, - }, - { - id: 'ACRO_PHYSICAL_SUBSCALE_SCORE', - score: PHYSICAL_SUBSCALE_SCORE, - }, - { - id: 'ACRO_PSYCHOLOGICAL_APPEARANCE_SUBSCALE', - score: PSYCHOLOGICAL_APPEARANCE_SUBSCALE, - }, - { - id: 'ACRO_PSYCHOLOGICAL_PERSONAL_RELATIONSHIPS_SUBSCALE', - score: PSYCHOLOGICAL_PERSONAL_RELATIONSHIPS_SUBSCALE, - }, - ] -} - -const specific_steps_acro_calc = [ - calculate_all_scores, - add_raw_values_to_inputs(ACRO_INPUTS), -] - -export const acro: CalculationType = create_calculation({ - calculation_name: 'Acromegaly Quality of Life Questionnaire (AcroQoL)', +export const acro: CalculationType = { + name: 'Acromegaly Quality of Life Questionnaire (AcroQoL)', readme_location: __dirname, - calculation_steps: specific_steps_acro_calc, - calculation_definition: { - input_definition: ACRO_INPUTS, - output_definition: ACRO_OUTPUT, + inputSchema: InputSchema, + outputSchema: ACRO_OUTPUT, + calculate: ({ data }) => { + const PHYSICAL_SUBSCALE_SCORE = calculate_scores(data, 'PHYSICAL_SUBSCALE') + const PSYCHOLOGICAL_APPEARANCE_SUBSCALE = calculate_scores( + data, + 'PSYCHOLOGICAL_APPEARANCE_SUBSCALE' + ) + const PSYCHOLOGICAL_PERSONAL_RELATIONSHIPS_SUBSCALE = calculate_scores( + data, + 'PSYCHOLOGICAL_PERSONAL_RELATIONSHIPS_SUBSCALE' + ) + const TOTAL_SCORE = calculate_scores(data, 'TOTAL_SCORE') + + return { + ACRO_GLOBAL_SCORE: TOTAL_SCORE, + ACRO_PHYSICAL_SUBSCALE_SCORE: PHYSICAL_SUBSCALE_SCORE, + ACRO_PSYCHOLOGICAL_APPEARANCE_SUBSCALE: PSYCHOLOGICAL_APPEARANCE_SUBSCALE, + ACRO_PSYCHOLOGICAL_PERSONAL_RELATIONSHIPS_SUBSCALE: + PSYCHOLOGICAL_PERSONAL_RELATIONSHIPS_SUBSCALE, + } }, -}) +} diff --git a/src/calculation_suite/calculations/acro/definition/acro_inputs.ts b/src/calculation_suite/calculations/acro/definition/acro_inputs.ts index cbe0da6..840fc3b 100644 --- a/src/calculation_suite/calculations/acro/definition/acro_inputs.ts +++ b/src/calculation_suite/calculations/acro/definition/acro_inputs.ts @@ -1,3 +1,4 @@ +import { z } from 'zod' import type { InputType } from '../../../../types/calculations.types' import { NumberInputType } from '../../../../types/calculations/inputs/calculation-inputs.types' @@ -237,3 +238,44 @@ export const ACRO_INPUTS: Array = [ input_type: input_type_agreement, }, ] + +const FrequencyInputSchema = z.union([ + z.literal(NEVER), + z.literal(RARELY), + z.literal(SOMETIMES), + z.literal(MOST_OF_THE_TIME), + z.literal(ALWAYS), +]) + +const AgreementInputSchema = z.union([ + z.literal(COMPLETELY_AGREE), + z.literal(MODERATELY_AGREE), + z.literal(NEITHER_AGREE_NOR_DISAGREE), + z.literal(MODERATELY_DISAGREE), + z.literal(COMPLETELY_DISAGREE), +]) + +export const InputSchema = z.object({ + Q01: AgreementInputSchema.optional(), + Q02: FrequencyInputSchema.optional(), + Q03: AgreementInputSchema.optional(), + Q04: FrequencyInputSchema.optional(), + Q05: FrequencyInputSchema.optional(), + Q06: FrequencyInputSchema.optional(), + Q07: FrequencyInputSchema.optional(), + Q08: FrequencyInputSchema.optional(), + Q09: AgreementInputSchema.optional(), + Q10: FrequencyInputSchema.optional(), + Q11: FrequencyInputSchema.optional(), + Q12: FrequencyInputSchema.optional(), + Q13: AgreementInputSchema.optional(), + Q14: AgreementInputSchema.optional(), + Q15: AgreementInputSchema.optional(), + Q16: FrequencyInputSchema.optional(), + Q17: FrequencyInputSchema.optional(), + Q18: FrequencyInputSchema.optional(), + Q19: AgreementInputSchema.optional(), + Q20: FrequencyInputSchema.optional(), + Q21: FrequencyInputSchema.optional(), + Q22: AgreementInputSchema.optional(), +}) diff --git a/src/calculation_suite/calculations/acro/definition/acro_output.ts b/src/calculation_suite/calculations/acro/definition/acro_output.ts index 8ba87c6..c2dfbdd 100644 --- a/src/calculation_suite/calculations/acro/definition/acro_output.ts +++ b/src/calculation_suite/calculations/acro/definition/acro_output.ts @@ -1,24 +1,20 @@ -import type { CalculationOutputDefinition } from '../../../../types/calculations.types' +import { z } from 'zod' -export const ACRO_OUTPUT: CalculationOutputDefinition[] = [ - { - subresult_id: 'ACRO_GLOBAL_SCORE', +export const ACRO_OUTPUT = { + ACRO_GLOBAL_SCORE: { label: { en: 'Global score' }, - type: 'number', + type: z.number(), }, - { - subresult_id: 'ACRO_PHYSICAL_SUBSCALE_SCORE', + ACRO_PHYSICAL_SUBSCALE_SCORE: { label: { en: 'Physical subscale score' }, - type: 'number', + type: z.number(), }, - { - subresult_id: 'ACRO_PSYCHOLOGICAL_APPEARANCE_SUBSCALE', + ACRO_PSYCHOLOGICAL_APPEARANCE_SUBSCALE: { label: { en: 'Psychological subscale - Appearance score' }, - type: 'number', + type: z.number(), }, - { - subresult_id: 'ACRO_PSYCHOLOGICAL_PERSONAL_RELATIONSHIPS_SUBSCALE', + ACRO_PSYCHOLOGICAL_PERSONAL_RELATIONSHIPS_SUBSCALE: { label: { en: 'Psychosocial - Personal relationship score' }, - type: 'number', + type: z.number(), }, -] +} diff --git a/src/calculation_suite/calculations/acro/definition/index.ts b/src/calculation_suite/calculations/acro/definition/index.ts index c6a8b7f..ca5179e 100644 --- a/src/calculation_suite/calculations/acro/definition/index.ts +++ b/src/calculation_suite/calculations/acro/definition/index.ts @@ -1,3 +1,3 @@ -export { ACRO_INPUTS } from './acro_inputs' +export { ACRO_INPUTS, InputSchema } from './acro_inputs' export { ACRO_OUTPUT } from './acro_output' export { ACRO_SUBSCALES } from './acro_subscales' diff --git a/src/calculation_suite/calculations/acro/helpers/calculate_scores.ts b/src/calculation_suite/calculations/acro/helpers/calculate_scores.ts index f9c4b36..0022a16 100644 --- a/src/calculation_suite/calculations/acro/helpers/calculate_scores.ts +++ b/src/calculation_suite/calculations/acro/helpers/calculate_scores.ts @@ -1,33 +1,26 @@ import R from 'ramda' -import type { InputType } from '../../../../types/calculations.types' import { ACRO_SUBSCALES, type SubscaleType } from '../definition/acro_subscales' -import { - inputIdLens, - rawInputValueLens, -} from '../../../helper_functions/calculation_variants/api/input/lenses' -import { MISSING_MESSAGE, type MissingScoreType } from '../../../PARAMETERS' -import { is_numeric } from '../../shared_functions' +import { z } from 'zod' +import { InputSchema } from '../definition' +import _ from 'lodash' export const calculate_scores = ( - inputs_with_answers: Array, + inputs_with_answers: z.infer, subscale: SubscaleType -): number | MissingScoreType => { +): number | null => { const INPUT_IDS_NEEDED_FOR_SCORING = ACRO_SUBSCALES[subscale] - const valid_answers_in_subscale = R.compose( - R.filter(is_numeric), - R.map(raw_value => Number(raw_value)), - R.map(input => R.view(rawInputValueLens, input)), - R.filter(input => - INPUT_IDS_NEEDED_FOR_SCORING.includes(R.view(inputIdLens, input)) + const valid_answers_in_subscale = _.compact( + _.filter(inputs_with_answers, (_i, key) => + INPUT_IDS_NEEDED_FOR_SCORING.includes(key) ) - )(inputs_with_answers) + ) if ( valid_answers_in_subscale.length !== INPUT_IDS_NEEDED_FOR_SCORING.length ) { - return MISSING_MESSAGE + return null } const subscaleTotal = R.sum(valid_answers_in_subscale) @@ -38,6 +31,7 @@ export const calculate_scores = ( PSYCHOLOGICAL_PERSONAL_RELATIONSHIPS_SUBSCALE: 35, TOTAL_SCORE: 110, } + const hundred = 100 /** * Original Calculcation: diff --git a/src/calculation_suite/calculations/age_calc/age_calc.test.ts b/src/calculation_suite/calculations/age_calc/age_calc.test.ts index 2f31a01..2b8ece8 100644 --- a/src/calculation_suite/calculations/age_calc/age_calc.test.ts +++ b/src/calculation_suite/calculations/age_calc/age_calc.test.ts @@ -1,16 +1,11 @@ import { expect } from 'chai' import moment from 'moment' -import R from 'ramda' -import { execute_test_calculation } from '../../helper_functions/execute_test_calculation' -import { get_result_ids_from_calculation_output } from '../../helper_functions/get_result_ids_from_calculation_output' -import { view_result } from '../../helper_functions/view_result' import { CALCULATIONS } from '../calculation_library' -import { get_input_ids_from_calculation_blueprint } from '../shared_functions' import { age_calc } from './age_calc' -import { AGE_CALC_INPUTS } from './definition/age_calc_inputs' +import { Calculation } from '../../../api/shared/classes/Calculation' -const calculate_age = execute_test_calculation(age_calc) +const calculate_age = new Calculation(age_calc) describe('age_calc', function () { it('age_calc calculation function should be available as a calculation', function () { @@ -21,8 +16,9 @@ describe('age_calc', function () { it('should use the correct input fields', function () { const EXPECTED_CALCULATION_INPUT_IDS = ['date_of_birth'] - const configured_calculation_input_ids = - get_input_ids_from_calculation_blueprint(AGE_CALC_INPUTS) + const configured_calculation_input_ids = Object.keys( + calculate_age.inputSchema.shape + ) expect(configured_calculation_input_ids).to.have.members( EXPECTED_CALCULATION_INPUT_IDS @@ -31,16 +27,17 @@ describe('age_calc', function () { }) describe('each calculated score includes the correct output result and correct score title', function () { - const outcome = calculate_age({ date_of_birth: '1993-11-30' }) + const outcome = calculate_age.calculate({ + payload: { date_of_birth: '1993-11-30' }, + }) it('should return 1 calculation result', function () { - expect(outcome).to.have.length(1) + expect(Object.keys(outcome)).to.have.length(1) }) it('should have the expected calculation id', function () { const EXPECTED_CALCULATION_ID = ['AGE'] - const configured_calculation_id = - get_result_ids_from_calculation_output(outcome) + const configured_calculation_id = Object.keys(outcome) expect(configured_calculation_id).to.eql(EXPECTED_CALCULATION_ID) }) @@ -50,14 +47,13 @@ describe('age_calc', function () { it('should return correct result age', function () { const dob = '1993-11-30' - const result = R.compose( - view_result('AGE'), - calculate_age - )({ date_of_birth: '1993-11-30' }) + const result = calculate_age.calculate({ + payload: { date_of_birth: '1993-11-30' }, + }) const EXPECTED_AGE = moment().diff(dob, 'years') - expect(result).to.eql(EXPECTED_AGE) + expect(result.AGE).to.eql(EXPECTED_AGE) }) }) }) diff --git a/src/calculation_suite/calculations/age_calc/age_calc.ts b/src/calculation_suite/calculations/age_calc/age_calc.ts index c928d6c..060bf20 100644 --- a/src/calculation_suite/calculations/age_calc/age_calc.ts +++ b/src/calculation_suite/calculations/age_calc/age_calc.ts @@ -1,62 +1,21 @@ -/* eslint-disable no-magic-numbers */ import moment from 'moment' -import R from 'ramda' - -import type { - CalculationType, - InputType, - WIPCalculationResultType, -} from '../../../types/calculations.types' -import { - inputIdLens, - rawInputValueLens, -} from '../../helper_functions/calculation_variants/api/input/lenses' -import { add_raw_values_to_inputs } from '../../helper_functions/calculation_variants/simple_calculation' -import { create_calculation } from '../../helper_functions/create_calculation' -import { MISSING_MESSAGE } from '../../PARAMETERS' -import { AGE_CALC_INPUTS, AGE_CALC_OUTPUT } from './definition' - -const CALCULATION_ID = 'AGE' - -const calculate_age = ( - inputs_with_answers: Array -): WIPCalculationResultType => { - const dob = R.compose( - R.view(rawInputValueLens), - R.find(input => R.view(inputIdLens, input) === 'date_of_birth') - )(inputs_with_answers) - - if (R.isNil(dob) || R.isEmpty(dob)) - return [ - { - id: CALCULATION_ID, - score: MISSING_MESSAGE, - }, - ] - - const dobMoment = moment(dob, moment.ISO_8601) - - const age = moment().diff(dobMoment, 'years') - - return [ - { - id: CALCULATION_ID, - score: age, - }, - ] -} - -export const specific_steps_age_calc = [ - calculate_age, - add_raw_values_to_inputs(AGE_CALC_INPUTS), -] - -export const age_calc: CalculationType = create_calculation({ - calculation_name: 'Age Calculator', +import { CalculationType } from '../../../api/shared/classes/Calculation' +import { InputSchema, AGE_CALC_OUTPUT } from './definition' + +export const age_calc: CalculationType< + typeof InputSchema, + typeof AGE_CALC_OUTPUT +> = { + name: 'Age Calculator', readme_location: __dirname, - calculation_steps: specific_steps_age_calc, - calculation_definition: { - input_definition: AGE_CALC_INPUTS, - output_definition: AGE_CALC_OUTPUT, + inputSchema: InputSchema, + outputSchema: AGE_CALC_OUTPUT, + calculate: ({ data }) => { + const dobMoment = moment(data.date_of_birth, moment.ISO_8601) + const age = moment().diff(dobMoment, 'years') + + return { + AGE: age, + } }, -}) +} diff --git a/src/calculation_suite/calculations/age_calc/definition/age_calc_inputs.ts b/src/calculation_suite/calculations/age_calc/definition/age_calc_inputs.ts index 455208f..3a5ee29 100644 --- a/src/calculation_suite/calculations/age_calc/definition/age_calc_inputs.ts +++ b/src/calculation_suite/calculations/age_calc/definition/age_calc_inputs.ts @@ -1,3 +1,4 @@ +import { z } from 'zod' import { type InputType } from '../../../../types/calculations.types' export const AGE_CALC_INPUTS: Array = [ @@ -15,3 +16,7 @@ export const AGE_CALC_INPUTS: Array = [ required: true, }, ] + +export const InputSchema = z.object({ + date_of_birth: z.string().date(), +}) diff --git a/src/calculation_suite/calculations/age_calc/definition/age_calc_output.ts b/src/calculation_suite/calculations/age_calc/definition/age_calc_output.ts index 4742a25..3567267 100644 --- a/src/calculation_suite/calculations/age_calc/definition/age_calc_output.ts +++ b/src/calculation_suite/calculations/age_calc/definition/age_calc_output.ts @@ -1,10 +1,9 @@ -import type { CalculationOutputDefinition } from '../../../../types/calculations.types' +import { z } from 'zod' -export const AGE_CALC_OUTPUT: CalculationOutputDefinition[] = [ - { - subresult_id: 'AGE', +export const AGE_CALC_OUTPUT = { + AGE: { label: { en: 'Age' }, unit: { en: 'years' }, - type: 'number', + type: z.number(), }, -] +} diff --git a/src/calculation_suite/calculations/age_calc/definition/index.ts b/src/calculation_suite/calculations/age_calc/definition/index.ts index a686297..da287c9 100644 --- a/src/calculation_suite/calculations/age_calc/definition/index.ts +++ b/src/calculation_suite/calculations/age_calc/definition/index.ts @@ -1,2 +1,2 @@ -export { AGE_CALC_INPUTS } from './age_calc_inputs' +export { AGE_CALC_INPUTS, InputSchema } from './age_calc_inputs' export { AGE_CALC_OUTPUT } from './age_calc_output' diff --git a/src/calculation_suite/calculations/asrs/asrs.test.ts b/src/calculation_suite/calculations/asrs/asrs.test.ts index dc4edb5..1e4743b 100644 --- a/src/calculation_suite/calculations/asrs/asrs.test.ts +++ b/src/calculation_suite/calculations/asrs/asrs.test.ts @@ -1,22 +1,17 @@ import { expect } from 'chai' -import { InvalidInputsError } from '../../errors' -import { execute_test_calculation } from '../../helper_functions/execute_test_calculation' -import { get_result_ids_from_calculation_output } from '../../helper_functions/get_result_ids_from_calculation_output' -import { view_result } from '../../helper_functions/view_result' -import { view_status } from '../../helper_functions/view_status' -import { MISSING_STATUS } from '../../PARAMETERS' import { CALCULATIONS } from '../calculation_library' -import { get_input_ids_from_calculation_blueprint } from '../shared_functions' import { best_response, random_response, worst_response, } from './__testdata__/asrs_test_responses' import { asrs } from './asrs' -import { ASRS_INPUTS, ASRS_PARTS, ASRS_SUBSCALES } from './definition' +import { ASRS_PARTS, ASRS_SUBSCALES } from './definition' +import { Calculation } from '../../../api/shared/classes/Calculation' +import { ZodError } from 'zod' -const asrs_calculation = execute_test_calculation(asrs) +const asrs_calculation = new Calculation(asrs) describe('asrs', function () { it('asrs calculation function should be available as a calculation', function () { @@ -24,7 +19,7 @@ describe('asrs', function () { }) describe('basic assumptions', function () { - const outcome = asrs_calculation(best_response) + const outcome = asrs_calculation.calculate({ payload: best_response }) it('should have the expected calculation ids', function () { const EXPECTED_CALCULATION_IDS = [ @@ -35,8 +30,7 @@ describe('asrs', function () { 'ASRS_HYPERACTIVE_IMPULSIVE_SUBSCALE_MOTOR_SCORE', 'ASRS_HYPERACTIVE_IMPULSIVE_SUBSCALE_VERBAL_SCORE', ] - const configured_calculation_ids = - get_result_ids_from_calculation_output(outcome) + const configured_calculation_ids = Object.keys(outcome) expect(configured_calculation_ids).to.eql(EXPECTED_CALCULATION_IDS) }) @@ -66,8 +60,9 @@ describe('asrs', function () { 'Q18', ] - const configured_input_ids = - get_input_ids_from_calculation_blueprint(ASRS_INPUTS) + const configured_input_ids = Object.keys( + asrs_calculation.inputSchema.shape + ) expect(EXPECTED_INPUT_IDS).to.eql(configured_input_ids) }) @@ -147,273 +142,256 @@ describe('asrs', function () { describe('when an answer is below the expected range', function () { it('should throw an InvalidInputsError', function () { expect(() => - asrs_calculation({ - Q01: -1, + asrs_calculation.calculate({ + payload: { + Q01: -1, + }, }) - ).to.throw(InvalidInputsError) + ).to.throw(ZodError) }) }) describe('when an answer is above the expected range', function () { it('should throw an InvalidInputsError', function () { expect(() => - asrs_calculation({ - Q01: 5, + asrs_calculation.calculate({ + payload: { + Q01: 5, + }, }) - ).to.throw(InvalidInputsError) + ).to.throw(ZodError) }) }) describe('when there are non-numerical answers', function () { it('should throw an InvalidInputsError', function () { expect(() => - asrs_calculation({ - Q01: "I'm not a number", + asrs_calculation.calculate({ + payload: { + Q01: "I'm not a number", + }, }) - ).to.throw(InvalidInputsError) + ).to.throw(ZodError) }) }) describe('when called with an empty response', function () { - const outcome = asrs_calculation({}) + const outcome = asrs_calculation.calculate({ payload: {} }) describe('Part A', function () { it('should return undefined for the score', function () { - const score = view_result('ASRS_PART_A_SCORE')(outcome) - - expect(score).to.eql(undefined) + expect(outcome.ASRS_PART_A_SCORE).to.eql(null) }) - it('should return MISSING for the status', function () { - const score = view_status('ASRS_PART_A_SCORE')(outcome) + // it('should return MISSING for the status', function () { + // const score = view_status('ASRS_PART_A_SCORE')(outcome) - expect(score).to.eql(MISSING_STATUS) - }) + // expect(score).to.eql(MISSING_STATUS) + // }) }) describe('Part B', function () { it('should return undefined for the score', function () { - const score = view_result('ASRS_PART_B_SCORE')(outcome) - - expect(score).to.eql(undefined) + expect(outcome.ASRS_PART_B_SCORE).to.eql(null) }) - it('should return MISSING for the status', function () { - const score = view_status('ASRS_PART_B_SCORE')(outcome) + // it('should return MISSING for the status', function () { + // const score = view_status('ASRS_PART_B_SCORE')(outcome) - expect(score).to.eql(MISSING_STATUS) - }) + // expect(score).to.eql(MISSING_STATUS) + // }) }) describe('Total score', function () { it('should return undefined for the score', function () { - const score = view_result('ASRS_TOTAL_SCORE')(outcome) - - expect(score).to.eql(undefined) + expect(outcome.ASRS_TOTAL_SCORE).to.eql(null) }) - it('should return MISSING for the status', function () { - const score = view_status('ASRS_TOTAL_SCORE')(outcome) + // it('should return MISSING for the status', function () { + // const score = view_status('ASRS_TOTAL_SCORE')(outcome) - expect(score).to.eql(MISSING_STATUS) - }) + // expect(score).to.eql(MISSING_STATUS) + // }) }) describe('Inattentive Subscale', function () { it('should return undefined for the score', function () { - const score = view_result('ASRS_INATTENTIVE_SUBSCALE_SCORE')(outcome) - - expect(score).to.eql(undefined) + expect(outcome.ASRS_INATTENTIVE_SUBSCALE_SCORE).to.eql(null) }) - it('should return MISSING for the status', function () { - const score = view_status('ASRS_INATTENTIVE_SUBSCALE_SCORE')(outcome) + // it('should return MISSING for the status', function () { + // const score = view_status('ASRS_INATTENTIVE_SUBSCALE_SCORE')(outcome) - expect(score).to.eql(MISSING_STATUS) - }) + // expect(score).to.eql(MISSING_STATUS) + // }) }) describe('Hyperactive/Impulsive Subscale (Motor)', function () { it('should return undefined for the score', function () { - const score = view_result( - 'ASRS_HYPERACTIVE_IMPULSIVE_SUBSCALE_MOTOR_SCORE' - )(outcome) - - expect(score).to.eql(undefined) + expect( + outcome.ASRS_HYPERACTIVE_IMPULSIVE_SUBSCALE_MOTOR_SCORE + ).to.eql(null) }) - it('should return MISSING for the status', function () { - const score = view_status( - 'ASRS_HYPERACTIVE_IMPULSIVE_SUBSCALE_MOTOR_SCORE' - )(outcome) + // it('should return MISSING for the status', function () { + // const score = view_status('ASRS_INATTENTIVE_SUBSCALE_SCORE')(outcome) - expect(score).to.eql(MISSING_STATUS) + // expect(score).to.eql(MISSING_STATUS) + // }) + }) + describe('Hyperactive/Impulsive Subscale (Motor)', function () { + it('should return undefined for the score', function () { + expect( + outcome.ASRS_HYPERACTIVE_IMPULSIVE_SUBSCALE_VERBAL_SCORE + ).to.eql(null) }) + + // it('should return MISSING for the status', function () { + // const score = view_status( + // 'ASRS_HYPERACTIVE_IMPULSIVE_SUBSCALE_MOTOR_SCORE' + // )(outcome) + + // expect(score).to.eql(MISSING_STATUS) + // }) }) describe('Hyperactive/Impulsive Subscale (Verbal)', function () { it('should return undefined for the score', function () { - const score = view_result( - 'ASRS_HYPERACTIVE_IMPULSIVE_SUBSCALE_VERBAL_SCORE' - )(outcome) - - expect(score).to.eql(undefined) + expect( + outcome.ASRS_HYPERACTIVE_IMPULSIVE_SUBSCALE_VERBAL_SCORE + ).to.eql(null) }) - it('should return MISSING for the status', function () { - const score = view_status( - 'ASRS_HYPERACTIVE_IMPULSIVE_SUBSCALE_VERBAL_SCORE' - )(outcome) + // it('should return MISSING for the status', function () { + // const score = view_status( + // 'ASRS_HYPERACTIVE_IMPULSIVE_SUBSCALE_VERBAL_SCORE' + // )(outcome) - expect(score).to.eql(MISSING_STATUS) - }) + // expect(score).to.eql(MISSING_STATUS) + // }) }) }) }) describe('score calculation', function () { describe('when called with the worst response', function () { - const outcome = asrs_calculation(worst_response) + const outcome = asrs_calculation.calculate({ + payload: worst_response, + }) describe('Part A', function () { it('should return the worst score', function () { - const score = view_result('ASRS_PART_A_SCORE')(outcome) - + const score = outcome.ASRS_PART_A_SCORE expect(score).to.eql(6) }) }) describe('Part B', function () { it('should return the worst score', function () { - const score = view_result('ASRS_PART_B_SCORE')(outcome) - + const score = outcome.ASRS_PART_B_SCORE expect(score).to.eql(12) }) }) describe('Total score', function () { it('should return the worst score', function () { - const score = view_result('ASRS_TOTAL_SCORE')(outcome) - + const score = outcome.ASRS_TOTAL_SCORE expect(score).to.eql(18) }) }) describe('Inattentive Subscale', function () { it('should return the worst score', function () { - const score = view_result('ASRS_INATTENTIVE_SUBSCALE_SCORE')(outcome) - + const score = outcome.ASRS_INATTENTIVE_SUBSCALE_SCORE expect(score).to.eql(9) }) }) describe('Hyperactive/Impulsive Subscale (Motor)', function () { it('should return the worst score', function () { - const score = view_result( - 'ASRS_HYPERACTIVE_IMPULSIVE_SUBSCALE_MOTOR_SCORE' - )(outcome) - + const score = outcome.ASRS_HYPERACTIVE_IMPULSIVE_SUBSCALE_MOTOR_SCORE expect(score).to.eql(5) }) }) describe('Hyperactive/Impulsive Subscale (Verbal)', function () { it('should return the worst score', function () { - const score = view_result( - 'ASRS_HYPERACTIVE_IMPULSIVE_SUBSCALE_VERBAL_SCORE' - )(outcome) - + const score = outcome.ASRS_HYPERACTIVE_IMPULSIVE_SUBSCALE_VERBAL_SCORE expect(score).to.eql(4) }) }) }) describe('when called with the best response', function () { - const outcome = asrs_calculation(best_response) + const outcome = asrs_calculation.calculate({ + payload: best_response, + }) describe('Part A', function () { it('should return the best score', function () { - const score = view_result('ASRS_PART_A_SCORE')(outcome) - + const score = outcome.ASRS_PART_A_SCORE expect(score).to.eql(0) }) }) describe('Part B', function () { it('should return the best score', function () { - const score = view_result('ASRS_PART_B_SCORE')(outcome) - + const score = outcome.ASRS_PART_B_SCORE expect(score).to.eql(0) }) }) describe('Total score', function () { it('should return the best score', function () { - const score = view_result('ASRS_TOTAL_SCORE')(outcome) - + const score = outcome.ASRS_TOTAL_SCORE expect(score).to.eql(0) }) }) describe('Inattentive Subscale', function () { it('should return the best score', function () { - const score = view_result('ASRS_INATTENTIVE_SUBSCALE_SCORE')(outcome) - + const score = outcome.ASRS_INATTENTIVE_SUBSCALE_SCORE expect(score).to.eql(0) }) }) describe('Hyperactive/Impulsive Subscale (Motor)', function () { it('should return the best score', function () { - const score = view_result( - 'ASRS_HYPERACTIVE_IMPULSIVE_SUBSCALE_MOTOR_SCORE' - )(outcome) - + const score = outcome.ASRS_HYPERACTIVE_IMPULSIVE_SUBSCALE_MOTOR_SCORE expect(score).to.eql(0) }) }) describe('Hyperactive/Impulsive Subscale (Verbal)', function () { it('should return the best score', function () { - const score = view_result( - 'ASRS_HYPERACTIVE_IMPULSIVE_SUBSCALE_VERBAL_SCORE' - )(outcome) - + const score = outcome.ASRS_HYPERACTIVE_IMPULSIVE_SUBSCALE_VERBAL_SCORE expect(score).to.eql(0) }) }) }) describe('when called with the random response', function () { - const outcome = asrs_calculation(random_response) + const outcome = asrs_calculation.calculate({ + payload: random_response, + }) describe('Part A', function () { it('should return the exepected score', function () { - const score = view_result('ASRS_PART_A_SCORE')(outcome) - + const score = outcome.ASRS_PART_A_SCORE expect(score).to.eql(2) }) }) describe('Part B', function () { it('should return the exepected score', function () { - const score = view_result('ASRS_PART_B_SCORE')(outcome) - + const score = outcome.ASRS_PART_B_SCORE expect(score).to.eql(5) }) }) describe('Total score', function () { it('should return the exepected score', function () { - const score = view_result('ASRS_TOTAL_SCORE')(outcome) - + const score = outcome.ASRS_TOTAL_SCORE expect(score).to.eql(7) }) }) describe('Inattentive Subscale', function () { it('should return the exepected score', function () { - const score = view_result('ASRS_INATTENTIVE_SUBSCALE_SCORE')(outcome) - + const score = outcome.ASRS_INATTENTIVE_SUBSCALE_SCORE expect(score).to.eql(4) }) }) describe('Hyperactive/Impulsive Subscale (Motor)', function () { it('should return the exepected score', function () { - const score = view_result( - 'ASRS_HYPERACTIVE_IMPULSIVE_SUBSCALE_MOTOR_SCORE' - )(outcome) - + const score = outcome.ASRS_HYPERACTIVE_IMPULSIVE_SUBSCALE_MOTOR_SCORE expect(score).to.eql(2) }) }) describe('Hyperactive/Impulsive Subscale (Verbal)', function () { it('should return the exepected score', function () { - const score = view_result( - 'ASRS_HYPERACTIVE_IMPULSIVE_SUBSCALE_VERBAL_SCORE' - )(outcome) - + const score = outcome.ASRS_HYPERACTIVE_IMPULSIVE_SUBSCALE_VERBAL_SCORE expect(score).to.eql(1) }) }) diff --git a/src/calculation_suite/calculations/asrs/asrs.ts b/src/calculation_suite/calculations/asrs/asrs.ts index fe66188..edb81a5 100644 --- a/src/calculation_suite/calculations/asrs/asrs.ts +++ b/src/calculation_suite/calculations/asrs/asrs.ts @@ -1,77 +1,38 @@ -import type { - CalculationType, - InputType, - WIPCalculationResultType, -} from '../../../types/calculations.types' -import { add_raw_values_to_inputs } from '../../helper_functions/calculation_variants/simple_calculation' -import { create_calculation } from '../../helper_functions/create_calculation' -import { MISSING_MESSAGE } from '../../PARAMETERS' -import { ASRS_INPUTS, ASRS_OUTPUT } from './definition' +import { CalculationType } from '../../../api/shared/classes/Calculation' +import { ASRS_OUTPUT, InputSchema } from './definition' import { calculate_part_scores, calculate_subscale_scores } from './helpers' -const calculate_scores = ( - inputs_with_answers: Array -): WIPCalculationResultType => { - const PART_A_SCORE = calculate_part_scores(inputs_with_answers, 'PART_A') - const PART_B_SCORE = calculate_part_scores(inputs_with_answers, 'PART_B') - const TOTAL_SCORE = - PART_A_SCORE === MISSING_MESSAGE || PART_B_SCORE === MISSING_MESSAGE - ? MISSING_MESSAGE - : Number(PART_A_SCORE) + Number(PART_B_SCORE) - const ASRS_INATTENTIVE_SUBSCALE_SCORE = calculate_subscale_scores( - inputs_with_answers, - 'INATTENTIVE_SUBSCALE' - ) - const ASRS_HYPERACTIVE_IMPULSIVE_SUBSCALE_MOTOR_SCORE = - calculate_subscale_scores( - inputs_with_answers, - 'HYPERACTIVE_IMPULSIVE_SUBSCALE_MOTOR' - ) - const ASRS_HYPERACTIVE_IMPULSIVE_SUBSCALE_VERBAL_SCORE = - calculate_subscale_scores( - inputs_with_answers, - 'HYPERACTIVE_IMPULSIVE_SUBSCALE_VERBAL' - ) - - return [ - { - id: 'ASRS_PART_A_SCORE', - score: PART_A_SCORE, - }, - { - id: 'ASRS_PART_B_SCORE', - score: PART_B_SCORE, - }, - { - id: 'ASRS_TOTAL_SCORE', - score: TOTAL_SCORE, - }, - { - id: 'ASRS_INATTENTIVE_SUBSCALE_SCORE', - score: ASRS_INATTENTIVE_SUBSCALE_SCORE, - }, - { - id: 'ASRS_HYPERACTIVE_IMPULSIVE_SUBSCALE_MOTOR_SCORE', - score: ASRS_HYPERACTIVE_IMPULSIVE_SUBSCALE_MOTOR_SCORE, - }, - { - id: 'ASRS_HYPERACTIVE_IMPULSIVE_SUBSCALE_VERBAL_SCORE', - score: ASRS_HYPERACTIVE_IMPULSIVE_SUBSCALE_VERBAL_SCORE, - }, - ] -} +export const asrs: CalculationType = { + name: 'Adult ADHD Self-Report Scale (ASRS-v1.1)', + readme_location: __dirname, + inputSchema: InputSchema, + outputSchema: ASRS_OUTPUT, + calculate: ({ data }) => { + const PART_A_SCORE = calculate_part_scores(data, 'PART_A') + const PART_B_SCORE = calculate_part_scores(data, 'PART_B') + const TOTAL_SCORE = + PART_A_SCORE === null || PART_B_SCORE === null + ? null + : PART_A_SCORE + PART_B_SCORE -export const specific_steps_asrs_calc = [ - calculate_scores, - add_raw_values_to_inputs(ASRS_INPUTS), -] + const ASRS_INATTENTIVE_SUBSCALE_SCORE = calculate_subscale_scores( + data, + 'INATTENTIVE_SUBSCALE' + ) + const ASRS_HYPERACTIVE_IMPULSIVE_SUBSCALE_MOTOR_SCORE = + calculate_subscale_scores(data, 'HYPERACTIVE_IMPULSIVE_SUBSCALE_MOTOR') + const ASRS_HYPERACTIVE_IMPULSIVE_SUBSCALE_VERBAL_SCORE = + calculate_subscale_scores(data, 'HYPERACTIVE_IMPULSIVE_SUBSCALE_VERBAL') -export const asrs: CalculationType = create_calculation({ - calculation_name: 'Adult ADHD Self-Report Scale (ASRS-v1.1)', - readme_location: __dirname, - calculation_steps: specific_steps_asrs_calc, - calculation_definition: { - input_definition: ASRS_INPUTS, - output_definition: ASRS_OUTPUT, + return { + ASRS_PART_A_SCORE: PART_A_SCORE, + ASRS_PART_B_SCORE: PART_B_SCORE, + ASRS_TOTAL_SCORE: TOTAL_SCORE, + ASRS_INATTENTIVE_SUBSCALE_SCORE: ASRS_INATTENTIVE_SUBSCALE_SCORE, + ASRS_HYPERACTIVE_IMPULSIVE_SUBSCALE_MOTOR_SCORE: + ASRS_HYPERACTIVE_IMPULSIVE_SUBSCALE_MOTOR_SCORE, + ASRS_HYPERACTIVE_IMPULSIVE_SUBSCALE_VERBAL_SCORE: + ASRS_HYPERACTIVE_IMPULSIVE_SUBSCALE_VERBAL_SCORE, + } }, -}) +} diff --git a/src/calculation_suite/calculations/asrs/definition/asrs_inputs.ts b/src/calculation_suite/calculations/asrs/definition/asrs_inputs.ts index b7e736a..e9d3720 100644 --- a/src/calculation_suite/calculations/asrs/definition/asrs_inputs.ts +++ b/src/calculation_suite/calculations/asrs/definition/asrs_inputs.ts @@ -1,3 +1,4 @@ +import { z } from 'zod' import { NumberInputType } from '../../../../types/calculations/inputs/calculation-inputs.types' import type { ASRSInputType } from '../../../../types/calculations/inputs/custom/asrs.types' @@ -187,3 +188,34 @@ export const ASRS_INPUTS: Array = [ positive_scores: [SOMETIMES, OFTEN, VERY_OFTEN], }, ] + +const InputTypeSchema = z + .union([ + z.literal(NEVER), + z.literal(RARELY), + z.literal(SOMETIMES), + z.literal(OFTEN), + z.literal(VERY_OFTEN), + ]) + .optional() + +export const InputSchema = z.object({ + Q01: InputTypeSchema, + Q02: InputTypeSchema, + Q03: InputTypeSchema, + Q04: InputTypeSchema, + Q05: InputTypeSchema, + Q06: InputTypeSchema, + Q07: InputTypeSchema, + Q08: InputTypeSchema, + Q09: InputTypeSchema, + Q10: InputTypeSchema, + Q11: InputTypeSchema, + Q12: InputTypeSchema, + Q13: InputTypeSchema, + Q14: InputTypeSchema, + Q15: InputTypeSchema, + Q16: InputTypeSchema, + Q17: InputTypeSchema, + Q18: InputTypeSchema, +}) diff --git a/src/calculation_suite/calculations/asrs/definition/asrs_output.ts b/src/calculation_suite/calculations/asrs/definition/asrs_output.ts index 94de137..07c3cf8 100644 --- a/src/calculation_suite/calculations/asrs/definition/asrs_output.ts +++ b/src/calculation_suite/calculations/asrs/definition/asrs_output.ts @@ -1,34 +1,28 @@ -import type { CalculationOutputDefinition } from '../../../../types/calculations.types' +import { z } from 'zod' -export const ASRS_OUTPUT: CalculationOutputDefinition[] = [ - { - subresult_id: 'ASRS_PART_A_SCORE', +export const ASRS_OUTPUT = { + ASRS_PART_A_SCORE: { label: { en: 'ASRS - Part A' }, - type: 'number', + type: z.number(), }, - { - subresult_id: 'ASRS_PART_B_SCORE', + ASRS_PART_B_SCORE: { label: { en: 'ASRS - Part B' }, - type: 'number', + type: z.number(), }, - { - subresult_id: 'ASRS_TOTAL_SCORE', + ASRS_TOTAL_SCORE: { label: { en: 'ASRS - Total Score' }, - type: 'number', + type: z.number(), }, - { - subresult_id: 'ASRS_INATTENTIVE_SUBSCALE_SCORE', + ASRS_INATTENTIVE_SUBSCALE_SCORE: { label: { en: 'ASRS - Inattentive Subscale Score' }, - type: 'number', + type: z.number(), }, - { - subresult_id: 'ASRS_HYPERACTIVE_IMPULSIVE_SUBSCALE_MOTOR_SCORE', + ASRS_HYPERACTIVE_IMPULSIVE_SUBSCALE_MOTOR_SCORE: { label: { en: 'ASRS - Hyperactive/Impulsive Subscale (Motor)' }, - type: 'number', + type: z.number(), }, - { - subresult_id: 'ASRS_HYPERACTIVE_IMPULSIVE_SUBSCALE_VERBAL_SCORE', + ASRS_HYPERACTIVE_IMPULSIVE_SUBSCALE_VERBAL_SCORE: { label: { en: 'ASRS - Hyperactive/Impulsive Subscale (Verbal)' }, - type: 'number', + type: z.number(), }, -] +} diff --git a/src/calculation_suite/calculations/asrs/definition/index.ts b/src/calculation_suite/calculations/asrs/definition/index.ts index 0e08e1d..9e228e1 100644 --- a/src/calculation_suite/calculations/asrs/definition/index.ts +++ b/src/calculation_suite/calculations/asrs/definition/index.ts @@ -1,4 +1,4 @@ -export { ASRS_INPUTS } from './asrs_inputs' +export { ASRS_INPUTS, InputSchema } from './asrs_inputs' export { ASRS_OUTPUT } from './asrs_output' export { ASRS_PARTS } from './asrs_parts' export { ASRS_SUBSCALES } from './asrs_subscales' diff --git a/src/calculation_suite/calculations/asrs/helpers/calculate_part_scores.ts b/src/calculation_suite/calculations/asrs/helpers/calculate_part_scores.ts index b230e85..aac67fc 100644 --- a/src/calculation_suite/calculations/asrs/helpers/calculate_part_scores.ts +++ b/src/calculation_suite/calculations/asrs/helpers/calculate_part_scores.ts @@ -1,54 +1,34 @@ import R from 'ramda' -import type { InputType } from '../../../../types/calculations.types' -import { MISSING_MESSAGE } from '../../../PARAMETERS' import { ASRS_PARTS, type PartType } from '../definition/asrs_parts' -import { ASRS_INPUTS } from '../definition' -import { is_numeric } from '../../shared_functions' - -import { - inputIdLens, - rawInputValueLens, - stdInputValueLens, -} from '../../../helper_functions/calculation_variants/api/input/lenses' +import { ASRS_INPUTS, InputSchema } from '../definition' +import { z } from 'zod' +import _ from 'lodash' export const calculate_part_scores = ( - inputs_with_answers: Array, + inputs_with_answers: z.infer, part: PartType -): number | string => { +): number | null => { const INPUT_IDS_NEEDED_FOR_SCORING = ASRS_PARTS[part] - const valid_standardized_input_scores = R.compose( - R.filter(is_numeric), - R.map(stdValue => Number(stdValue)), - R.filter(stdValue => stdValue !== MISSING_MESSAGE), - R.map(input => R.view(stdInputValueLens, input)), - R.map(input => { - const inputValue = R.view(rawInputValueLens, input) - - if (inputValue === MISSING_MESSAGE) - return R.set(stdInputValueLens, MISSING_MESSAGE, input) - - const input_definition = ASRS_INPUTS.find( - id => R.view(inputIdLens, id) === R.view(inputIdLens, input) - ) - - if (!input_definition) { - return R.set(stdInputValueLens, MISSING_MESSAGE, input) - } - - if (input_definition.positive_scores.includes(inputValue)) { - return R.set(stdInputValueLens, 1, input) - } - - return R.set(stdInputValueLens, 0, input) - }), - R.filter(({ input_id }: InputType) => - INPUT_IDS_NEEDED_FOR_SCORING.includes(input_id) + const inputs_in_part = _.pick( + inputs_with_answers, + INPUT_IDS_NEEDED_FOR_SCORING + ) + + const standardized_input_scores = _.map(inputs_in_part, (_i, key) => { + const input_definition = ASRS_INPUTS.find( + inputDef => inputDef.input_id === key ) - )(inputs_with_answers) - if (valid_standardized_input_scores.length === 0) return MISSING_MESSAGE + if (input_definition === undefined || _i === undefined) return null + + if (input_definition.positive_scores.includes(_i)) return 1 + + return 0 + }).filter(v => v !== null) + + if (standardized_input_scores.length === 0) return null - return R.sum(valid_standardized_input_scores) + return R.sum(standardized_input_scores as number[]) } diff --git a/src/calculation_suite/calculations/asrs/helpers/calculate_subscale_scores.ts b/src/calculation_suite/calculations/asrs/helpers/calculate_subscale_scores.ts index 8671b4e..541514a 100644 --- a/src/calculation_suite/calculations/asrs/helpers/calculate_subscale_scores.ts +++ b/src/calculation_suite/calculations/asrs/helpers/calculate_subscale_scores.ts @@ -1,53 +1,34 @@ import R from 'ramda' -import type { InputType } from '../../../../types/calculations.types' -import { MISSING_MESSAGE } from '../../../PARAMETERS' import { ASRS_SUBSCALES, type SubscaleType } from '../definition/asrs_subscales' -import { ASRS_INPUTS } from '../definition' -import { - inputIdLens, - rawInputValueLens, - stdInputValueLens, -} from '../../../helper_functions/calculation_variants/api/input/lenses' -import { is_numeric } from '../../shared_functions' +import { ASRS_INPUTS, InputSchema } from '../definition' +import { z } from 'zod' +import _ from 'lodash' export const calculate_subscale_scores = ( - inputs_with_answers: Array, + inputs_with_answers: z.infer, subscale: SubscaleType -): number | string => { +): number | null => { const INPUT_IDS_NEEDED_FOR_SCORING = ASRS_SUBSCALES[subscale] - const valid_standardized_input_scores = R.compose( - R.filter(is_numeric), - R.map(stdValue => Number(stdValue)), - R.filter(stdValue => stdValue !== MISSING_MESSAGE), - R.map(input => R.view(stdInputValueLens, input)), - R.map(input => { - const inputValue = R.view(rawInputValueLens, input) - - if (inputValue === MISSING_MESSAGE) - return R.set(stdInputValueLens, MISSING_MESSAGE, input) - - const input_definition = ASRS_INPUTS.find( - id => R.view(inputIdLens, id) === R.view(inputIdLens, input) - ) - - if (!input_definition) { - return R.set(stdInputValueLens, 0, input) - } - - if (input_definition.positive_scores.includes(inputValue)) { - return R.set(stdInputValueLens, 1, input) - } - - return R.set(stdInputValueLens, 0, input) - }), - R.filter(({ input_id }: InputType) => - INPUT_IDS_NEEDED_FOR_SCORING.includes(input_id) + const inputs_in_subscale = _.pick( + inputs_with_answers, + INPUT_IDS_NEEDED_FOR_SCORING + ) + + const standardized_input_scores = _.map(inputs_in_subscale, (_i, key) => { + const input_definition = ASRS_INPUTS.find( + inputDef => inputDef.input_id === key ) - )(inputs_with_answers) - if (valid_standardized_input_scores.length === 0) return MISSING_MESSAGE + if (input_definition === undefined || _i === undefined) return null + + if (input_definition.positive_scores.includes(_i)) return 1 + + return 0 + }).filter(v => v !== null) + + if (standardized_input_scores.length === 0) return null - return R.sum(valid_standardized_input_scores) + return R.sum(standardized_input_scores as number[]) } diff --git a/src/calculation_suite/calculations/audit/audit.test.ts b/src/calculation_suite/calculations/audit/audit.test.ts index 320561b..b7d5acc 100644 --- a/src/calculation_suite/calculations/audit/audit.test.ts +++ b/src/calculation_suite/calculations/audit/audit.test.ts @@ -145,22 +145,22 @@ describe('audit', function () { const outcome = audit_calculation({}) it('should return the 0 as score for Consumption scale', function () { const score = view_result('CONSUMPTION')(outcome) - return expect(score).to.eql(0) + expect(score).to.eql(0) }) it('should return the 0 as score for Dependence scale', function () { const score = view_result('DEPENDENCE')(outcome) - return expect(score).to.eql(0) + expect(score).to.eql(0) }) it('should return the 0 as score for Alcohol Related Problem scale', function () { const score = view_result('ALCOHOL_RELATED_PROBLEMS')(outcome) - return expect(score).to.eql(0) + expect(score).to.eql(0) }) it('should return the 0 as score for Total', function () { const score = view_result('TOTAL')(outcome) - return expect(score).to.eql(0) + expect(score).to.eql(0) }) }) }) @@ -172,24 +172,24 @@ describe('audit', function () { it('should return the minimum score for Consumption scale', function () { const score = view_result('CONSUMPTION')(outcome) const CONSUMPTION_MIN_SCORE = 0 - return expect(score).to.eql(CONSUMPTION_MIN_SCORE) + expect(score).to.eql(CONSUMPTION_MIN_SCORE) }) it('should return the minimum score for Dependence scale', function () { const score = view_result('DEPENDENCE')(outcome) const DEPENDENCE_MIN_SCORE = 0 - return expect(score).to.eql(DEPENDENCE_MIN_SCORE) + expect(score).to.eql(DEPENDENCE_MIN_SCORE) }) it('should return the minimum score for Alcohol Related Problem scale', function () { const score = view_result('ALCOHOL_RELATED_PROBLEMS')(outcome) const ALCOHOL_RELATED_PROBLEMS_MIN_SCORE = 0 - return expect(score).to.eql(ALCOHOL_RELATED_PROBLEMS_MIN_SCORE) + expect(score).to.eql(ALCOHOL_RELATED_PROBLEMS_MIN_SCORE) }) it('should return the minimum score for Total', function () { const score = view_result('TOTAL')(outcome) - return expect(score).to.eql(AUDIT_MIN_SCORE) + expect(score).to.eql(AUDIT_MIN_SCORE) }) }) @@ -198,24 +198,24 @@ describe('audit', function () { it('should return the median score for Consumption scale', function () { const score = view_result('CONSUMPTION')(outcome) const CONSUMPTION_MEDIAN_SCORE = 6 - return expect(score).to.eql(CONSUMPTION_MEDIAN_SCORE) + expect(score).to.eql(CONSUMPTION_MEDIAN_SCORE) }) it('should return the median score for Dependence scale', function () { const score = view_result('DEPENDENCE')(outcome) const DEPENDENCE_MEDIAN_SCORE = 6 - return expect(score).to.eql(DEPENDENCE_MEDIAN_SCORE) + expect(score).to.eql(DEPENDENCE_MEDIAN_SCORE) }) it('should return the median score for Alcohol Related Problem scale', function () { const score = view_result('ALCOHOL_RELATED_PROBLEMS')(outcome) const ALCOHOL_RELATED_PROBLEMS_MEDIAN_SCORE = 8 - return expect(score).to.eql(ALCOHOL_RELATED_PROBLEMS_MEDIAN_SCORE) + expect(score).to.eql(ALCOHOL_RELATED_PROBLEMS_MEDIAN_SCORE) }) it('should return the median score for Total', function () { const score = view_result('TOTAL')(outcome) - return expect(score).to.eql(AUDIT_MEDIAN_SCORE) + expect(score).to.eql(AUDIT_MEDIAN_SCORE) }) }) @@ -225,24 +225,24 @@ describe('audit', function () { it('should return the max score for Consumption scale', function () { const score = view_result('CONSUMPTION')(outcome) const CONSUMPTION_MAX_SCORE = 12 - return expect(score).to.eql(CONSUMPTION_MAX_SCORE) + expect(score).to.eql(CONSUMPTION_MAX_SCORE) }) it('should return the max score for Dependence scale', function () { const score = view_result('DEPENDENCE')(outcome) const DEPENDENCE_MAX_SCORE = 12 - return expect(score).to.eql(DEPENDENCE_MAX_SCORE) + expect(score).to.eql(DEPENDENCE_MAX_SCORE) }) it('should return the max score for Alcohol Related Problem scale', function () { const score = view_result('ALCOHOL_RELATED_PROBLEMS')(outcome) const ALCOHOL_RELATED_PROBLEMS_MAX_SCORE = 16 - return expect(score).to.eql(ALCOHOL_RELATED_PROBLEMS_MAX_SCORE) + expect(score).to.eql(ALCOHOL_RELATED_PROBLEMS_MAX_SCORE) }) it('should return the max score for Total', function () { const score = view_result('TOTAL')(outcome) - return expect(score).to.eql(AUDIT_MAX_SCORE) + expect(score).to.eql(AUDIT_MAX_SCORE) }) }) diff --git a/src/calculation_suite/calculations/beck/beck.test.ts b/src/calculation_suite/calculations/beck/beck.test.ts index 5fae217..3d5066f 100644 --- a/src/calculation_suite/calculations/beck/beck.test.ts +++ b/src/calculation_suite/calculations/beck/beck.test.ts @@ -1,31 +1,20 @@ import { expect } from 'chai' -import { compose } from 'ramda' - -import { InvalidInputsError } from '../../errors' -import { execute_test_calculation } from '../../helper_functions/execute_test_calculation' -import { get_result_ids_from_calculation_output } from '../../helper_functions/get_result_ids_from_calculation_output' -import { view_result } from '../../helper_functions/view_result' -import { MISSING_STATUS } from '../../PARAMETERS' import { CALCULATIONS } from '../calculation_library' -import { - get_input_ids_from_calculation_blueprint, - view_status, -} from '../shared_functions' import { max_response, median_response, min_response, random_response, } from './__testdata__/beck_form_responses' -// eslint-disable-next-line sort-imports -import { beck, BeckCalculationID } from './beck' -import { BECK_INPUTS } from './definition/beck_inputs' +import { beck } from './beck' +import { Calculation } from '../../../api/shared/classes/Calculation' +import { ZodError } from 'zod' const BECK_MIN_SCORE = 0 const BECK_MEDIAN_SCORE = 32 const BECK_MAX_SCORE = 63 -const beck_calculation = execute_test_calculation(beck) +const beck_calculation = new Calculation(beck) describe('beck', function () { it('beck calculation function should be available as a calculation', function () { @@ -33,16 +22,15 @@ describe('beck', function () { }) describe('basic assumptions', function () { - const outcome = beck_calculation(min_response) + const outcome = beck_calculation.calculate({ payload: min_response }) it('should return 1 calculation result', function () { - expect(outcome).to.have.length(1) + expect(Object.keys(outcome)).to.have.length(1) }) it('should have the expected calculation id', function () { const EXPECTED_CALCULATION_ID = ['beck'] - const configured_calculation_id = - get_result_ids_from_calculation_output(outcome) + const configured_calculation_id = Object.keys(outcome) expect(configured_calculation_id).to.eql(EXPECTED_CALCULATION_ID) }) @@ -75,8 +63,9 @@ describe('beck', function () { 'Q21', ] - const configured_calculation_input_ids = - get_input_ids_from_calculation_blueprint(BECK_INPUTS) + const configured_calculation_input_ids = Object.keys( + beck_calculation.inputSchema.shape + ) expect(EXPECTED_INPUT_IDS).to.eql(configured_calculation_input_ids) }) @@ -86,41 +75,44 @@ describe('beck', function () { describe('when an answer is not a number', function () { it('should throw an InvalidInputsError', function () { expect(() => - beck_calculation({ - Q01: "I'm not a number", + beck_calculation.calculate({ + payload: { + Q01: "I'm not a number", + }, }) - ).to.throw(InvalidInputsError) + ).to.throw(ZodError) }) }) describe('when an answer is below the expected [0,3] range', function () { it('should throw an InvalidInputsError', function () { expect(() => - beck_calculation({ - Q01: -1, + beck_calculation.calculate({ + payload: { + Q01: -1, + }, }) - ).to.throw(InvalidInputsError) + ).to.throw(ZodError) }) }) describe('when an answer is above the expected [0,3] range', function () { it('should throw an InvalidInputsError', function () { expect(() => - beck_calculation({ - Q01: 5, + beck_calculation.calculate({ + payload: { + Q01: 5, + }, }) - ).to.throw(InvalidInputsError) + ).to.throw(ZodError) }) }) }) describe('when called with an empty', function () { - it('should return undefined result & missing status', function () { - const outcome = beck_calculation({}) - const result = view_result(BeckCalculationID)(outcome) - const status = view_status(BeckCalculationID)(outcome) - - expect(result).to.eql(undefined) - expect(status).to.eql(MISSING_STATUS) + it('should throw an error', function () { + expect(() => beck_calculation.calculate({ payload: {} })).to.throw( + ZodError + ) }) }) }) @@ -128,46 +120,38 @@ describe('beck', function () { describe('score calcualtion', function () { describe('when called with a minimum response', function () { it('should return the minimum score', function () { - const score = compose( - view_result(BeckCalculationID), - beck_calculation - )(min_response) - - expect(score).to.eql(BECK_MIN_SCORE) + const score = beck_calculation.calculate({ payload: min_response }) + expect(score.beck).to.eql(BECK_MIN_SCORE) }) }) describe('when called with a median response', function () { it('should return the median score', function () { - const score = compose( - view_result(BeckCalculationID), - beck_calculation - )(median_response) + const score = beck_calculation.calculate({ + payload: median_response, + }) - expect(score).to.eql(BECK_MEDIAN_SCORE) + expect(score.beck).to.eql(BECK_MEDIAN_SCORE) }) }) describe('when called with a maximum response', function () { it('should return the maximum score', function () { - const score = compose( - view_result(BeckCalculationID), - beck_calculation - )(max_response) - - expect(score).to.eql(BECK_MAX_SCORE) + const score = beck_calculation.calculate({ + payload: max_response, + }) + expect(score.beck).to.eql(BECK_MAX_SCORE) }) }) describe('when called with a random response', function () { it('should return the expected score', function () { - const score = compose( - view_result(BeckCalculationID), - beck_calculation - )(random_response) + const score = beck_calculation.calculate({ + payload: random_response, + }) const EXPECTED_SCORE = 40 - expect(score).to.eql(EXPECTED_SCORE) + expect(score.beck).to.eql(EXPECTED_SCORE) }) }) }) diff --git a/src/calculation_suite/calculations/beck/beck.ts b/src/calculation_suite/calculations/beck/beck.ts index bd2f881..dd1a04a 100644 --- a/src/calculation_suite/calculations/beck/beck.ts +++ b/src/calculation_suite/calculations/beck/beck.ts @@ -1,20 +1,7 @@ -import R from 'ramda' - -import type { - CalculationType, - InputType, - WIPCalculationResultType, -} from '../../../types/calculations.types' -import { - add_raw_values_to_inputs, - do_all_required_inputs_have_a_valid_value, - get_valid_values, -} from '../../helper_functions/calculation_variants/simple_calculation' -import { create_calculation } from '../../helper_functions/create_calculation' -import { MISSING_MESSAGE } from '../../PARAMETERS' -import { BECK_INPUTS, BECK_OUTPUT } from './definition' - -export const BeckCalculationID = 'beck' +import { z } from 'zod' +import { CalculationType } from '../../../api/shared/classes/Calculation' +import { InputSchema, BECK_OUTPUT } from './definition' +import _ from 'lodash' /** * The answer values of question 16 and 18 have to be standardized @@ -30,59 +17,31 @@ const RAW_ANSWER_TO_VALUE_DICT: Record = { } const preprocess_beck_response = ( - beck_inputs_with_answers: Array -): Array => { + beck_inputs_with_answers: z.infer +): Record => { const QUESTIONS_TO_PREPROCESS = ['Q16', 'Q18'] - return R.map((input: InputType) => { - if (QUESTIONS_TO_PREPROCESS.includes(input.input_id)) { - const value_in_dict = - RAW_ANSWER_TO_VALUE_DICT[String(input.raw_input_value)] - - return { - ...input, - raw_input_value: value_in_dict, - } + return _.mapValues(beck_inputs_with_answers, (val, key) => { + if (QUESTIONS_TO_PREPROCESS.includes(key)) { + const value_in_dict = RAW_ANSWER_TO_VALUE_DICT[String(val)] + return value_in_dict } - return input - })(beck_inputs_with_answers) -} - -const calculate_beck_score = ( - beck_inputs_with_answers: Array -): WIPCalculationResultType => { - if (do_all_required_inputs_have_a_valid_value(beck_inputs_with_answers)) { - const total_score = R.sum(get_valid_values(beck_inputs_with_answers)) - - return [ - { - id: BeckCalculationID, - score: total_score, - }, - ] - } - - return [ - { - id: BeckCalculationID, - score: MISSING_MESSAGE, - }, - ] + return val + }) } -export const specific_steps_beck_calc = [ - calculate_beck_score, - preprocess_beck_response, - add_raw_values_to_inputs(BECK_INPUTS), -] - -export const beck: CalculationType = create_calculation({ - calculation_name: 'Beck Depression Inventory (BDI)', +export const beck: CalculationType = { + name: 'Beck Depression Inventory (BDI)', readme_location: __dirname, - calculation_steps: specific_steps_beck_calc, - calculation_definition: { - input_definition: BECK_INPUTS, - output_definition: BECK_OUTPUT, + inputSchema: InputSchema, + outputSchema: BECK_OUTPUT, + calculate: ({ data }) => { + const preprocessed_data = preprocess_beck_response(data) + const score = _.sum(Object.values(preprocessed_data)) + + return { + beck: score, + } }, -}) +} diff --git a/src/calculation_suite/calculations/beck/definition/beck_inputs.ts b/src/calculation_suite/calculations/beck/definition/beck_inputs.ts index 50207ac..20cba06 100644 --- a/src/calculation_suite/calculations/beck/definition/beck_inputs.ts +++ b/src/calculation_suite/calculations/beck/definition/beck_inputs.ts @@ -1,3 +1,4 @@ +import { z } from 'zod' import type { InputType } from '../../../../types/calculations.types' export const BECK_INPUTS: Array = [ @@ -851,3 +852,50 @@ export const BECK_INPUTS: Array = [ required: true, }, ] + +const InputTypeSchema = z.union([ + z.literal(0), + z.literal(1), + z.literal(2), + z.literal(3), +]) + +export const InputSchema = z.object({ + Q01: InputTypeSchema, + Q02: InputTypeSchema, + Q03: InputTypeSchema, + Q04: InputTypeSchema, + Q05: InputTypeSchema, + Q06: InputTypeSchema, + Q07: InputTypeSchema, + Q08: InputTypeSchema, + Q09: InputTypeSchema, + Q10: InputTypeSchema, + Q11: InputTypeSchema, + Q12: InputTypeSchema, + Q13: InputTypeSchema, + Q14: InputTypeSchema, + Q15: InputTypeSchema, + Q16: z.union([ + z.literal(0), + z.literal(1), + z.literal(2), + z.literal(3), + z.literal(4), + z.literal(5), + z.literal(6), + ]), + Q17: InputTypeSchema, + Q18: z.union([ + z.literal(0), + z.literal(1), + z.literal(2), + z.literal(3), + z.literal(4), + z.literal(5), + z.literal(6), + ]), + Q19: InputTypeSchema, + Q20: InputTypeSchema, + Q21: InputTypeSchema, +}) diff --git a/src/calculation_suite/calculations/beck/definition/beck_output.ts b/src/calculation_suite/calculations/beck/definition/beck_output.ts index 05163a5..3adb3e7 100644 --- a/src/calculation_suite/calculations/beck/definition/beck_output.ts +++ b/src/calculation_suite/calculations/beck/definition/beck_output.ts @@ -1,9 +1,8 @@ -import type { CalculationOutputDefinition } from '../../../../types/calculations.types' +import { z } from 'zod' -export const BECK_OUTPUT: CalculationOutputDefinition[] = [ - { - subresult_id: 'beck', +export const BECK_OUTPUT = { + beck: { label: { en: 'Total BDI score' }, - type: 'number', + type: z.number(), }, -] +} diff --git a/src/calculation_suite/calculations/beck/definition/index.ts b/src/calculation_suite/calculations/beck/definition/index.ts index 791dd9f..358f07e 100644 --- a/src/calculation_suite/calculations/beck/definition/index.ts +++ b/src/calculation_suite/calculations/beck/definition/index.ts @@ -1,2 +1,2 @@ -export { BECK_INPUTS } from './beck_inputs' +export { BECK_INPUTS, InputSchema } from './beck_inputs' export { BECK_OUTPUT } from './beck_output' diff --git a/src/calculation_suite/calculations/blcs/blcs.test.ts b/src/calculation_suite/calculations/blcs/blcs.test.ts index 3f51079..2b4c7ee 100644 --- a/src/calculation_suite/calculations/blcs/blcs.test.ts +++ b/src/calculation_suite/calculations/blcs/blcs.test.ts @@ -1,12 +1,6 @@ import { expect } from 'chai' -import { InvalidInputsError } from '../../errors' -import { execute_test_calculation } from '../../helper_functions/execute_test_calculation' -import { get_result_ids_from_calculation_output } from '../../helper_functions/get_result_ids_from_calculation_output' -import { view_result } from '../../helper_functions/view_result' -import { MISSING_STATUS } from '../../PARAMETERS' import { CALCULATIONS } from '../calculation_library' -import { get_input_ids_from_calculation_blueprint } from '../shared_functions' import { best_response, median_response, @@ -14,9 +8,10 @@ import { worst_response, } from './__testdata__/blcs_test_responses' import { blcs } from './blcs' -import { BLCS_INPUTS } from './definition' +import { Calculation } from '../../../api/shared/classes/Calculation' +import { ZodError } from 'zod' -const blcs_calculation = execute_test_calculation(blcs) +const blcs_calculation = new Calculation(blcs) describe('blcs', function () { it('blcs calculation function should be available as a calculation', function () { @@ -24,13 +19,12 @@ describe('blcs', function () { }) describe('basic assumptions', function () { - const outcome = blcs_calculation(best_response) + const outcome = blcs_calculation.calculate({ payload: best_response }) it('should have the expected result ids', function () { const EXPECTED_RESULT_IDS = ['BLCS_TOTAL_SCORE'] - const configured_calculation_ids = - get_result_ids_from_calculation_output(outcome) + const configured_calculation_ids = Object.keys(outcome) expect(configured_calculation_ids).to.eql(EXPECTED_RESULT_IDS) }) @@ -41,8 +35,9 @@ describe('blcs', function () { it('should have all the expected input ids configured', function () { const EXPECTED_INPUT_IDS = ['Q01', 'Q02', 'Q03', 'Q04'] - const configured_input_ids = - get_input_ids_from_calculation_blueprint(BLCS_INPUTS) + const configured_input_ids = Object.keys( + blcs_calculation.inputSchema.shape + ) expect(EXPECTED_INPUT_IDS).to.eql(configured_input_ids) }) @@ -52,88 +47,88 @@ describe('blcs', function () { describe('when an answer is below the expected range', function () { it('should throw an InvalidInputsError', function () { expect(() => - blcs_calculation({ - Q01: -1, + blcs_calculation.calculate({ + payload: { + Q01: -1, + }, }) - ).to.throw(InvalidInputsError) + ).to.throw(ZodError) }) }) describe('when an answer is above the expected range', function () { it('should throw an InvalidInputsError', function () { expect(() => - blcs_calculation({ - Q01: 5, + blcs_calculation.calculate({ + payload: { + Q01: 5, + }, }) - ).to.throw(InvalidInputsError) + ).to.throw(ZodError) }) }) describe('when an answer is above the expected range for Q04', function () { it('should throw an InvalidInputsError', function () { expect(() => - blcs_calculation({ - Q04: 11, + blcs_calculation.calculate({ + payload: { + Q04: 11, + }, }) - ).to.throw(InvalidInputsError) + ).to.throw(ZodError) }) }) describe('when there are non-numerical answers', function () { it('should throw an InvalidInputsError', function () { expect(() => - blcs_calculation({ - Q01: "I'm not a number", + blcs_calculation.calculate({ + payload: { + Q01: "I'm not a number", + }, }) - ).to.throw(InvalidInputsError) + ).to.throw(ZodError) }) }) describe('when called with an empty response', function () { - const outcome = blcs_calculation({}) + const outcome = blcs_calculation.calculate({ payload: {} }) - it('should return missing status for the score', function () { - expect(outcome[0].status).to.eql(MISSING_STATUS) + it('should return null for the score', function () { + expect(outcome.BLCS_TOTAL_SCORE).to.eql(null) }) }) describe('score calculation', function () { describe('when called with the worst response', function () { - const outcome = blcs_calculation(worst_response) + const outcome = blcs_calculation.calculate({ payload: worst_response }) it('should return the worst score', function () { - const score = view_result('BLCS_TOTAL_SCORE')(outcome) - - expect(score).to.eql(22) + expect(outcome.BLCS_TOTAL_SCORE).to.eql(22) }) }) describe('when called with the best response', function () { - const outcome = blcs_calculation(best_response) + const outcome = blcs_calculation.calculate({ payload: best_response }) it('should return the best score', function () { - const score = view_result('BLCS_TOTAL_SCORE')(outcome) - - expect(score).to.eql(0) + expect(outcome.BLCS_TOTAL_SCORE).to.eql(0) }) }) describe('when called with a median response', function () { - const outcome = blcs_calculation(median_response) + const outcome = blcs_calculation.calculate({ payload: median_response }) it('should return the median score', function () { - const score = view_result('BLCS_TOTAL_SCORE')(outcome) - - expect(score).to.eql(11) + expect(outcome.BLCS_TOTAL_SCORE).to.eql(11) }) }) describe('when called with the random response', function () { - const outcome = blcs_calculation(random_response) + const outcome = blcs_calculation.calculate({ payload: random_response }) it('should return the exepected score', function () { - const score = view_result('BLCS_TOTAL_SCORE')(outcome) - - expect(score).to.eql(10) + expect(outcome.BLCS_TOTAL_SCORE).to.eql(10) }) }) }) diff --git a/src/calculation_suite/calculations/blcs/blcs.ts b/src/calculation_suite/calculations/blcs/blcs.ts index ce2a6b8..d535cb4 100644 --- a/src/calculation_suite/calculations/blcs/blcs.ts +++ b/src/calculation_suite/calculations/blcs/blcs.ts @@ -1,34 +1,20 @@ -import type { - CalculationType, - InputType, - WIPCalculationResultType, -} from '../../../types/calculations.types' -import { add_raw_values_to_inputs } from '../../helper_functions/calculation_variants/simple_calculation' -import { create_calculation } from '../../helper_functions/create_calculation' -import { BLCS_INPUTS, BLCS_OUTPUT } from './definition' -import { calculate_total_score } from './helpers' +import _ from 'lodash' +import { CalculationType } from '../../../api/shared/classes/Calculation' +import { is_numeric } from '../shared_functions' +import { InputSchema, BLCS_OUTPUT } from './definition' -const calculate_scores = ( - inputs_with_answers: Array -): WIPCalculationResultType => { - const TOTAL_SCORE = calculate_total_score(inputs_with_answers) - - return [ - { - id: 'BLCS_TOTAL_SCORE', - score: TOTAL_SCORE, - }, - ] -} +export const blcs: CalculationType = { + name: 'Bladder Control Scale (BLCS)', + readme_location: __dirname, + inputSchema: InputSchema, + outputSchema: BLCS_OUTPUT, + calculate: ({ data }) => { + const valid_answers = Object.values(data).filter(is_numeric) -const blcs_calc = [calculate_scores, add_raw_values_to_inputs(BLCS_INPUTS)] + if (valid_answers.length === 0) return { BLCS_TOTAL_SCORE: null } -export const blcs: CalculationType = create_calculation({ - calculation_name: 'Bladder Control Scale (BLCS)', - readme_location: __dirname, - calculation_steps: blcs_calc, - calculation_definition: { - input_definition: BLCS_INPUTS, - output_definition: BLCS_OUTPUT, + return { + BLCS_TOTAL_SCORE: _.sum(valid_answers), + } }, -}) +} diff --git a/src/calculation_suite/calculations/blcs/definition/blcs_inputs.ts b/src/calculation_suite/calculations/blcs/definition/blcs_inputs.ts index 869be16..83d3344 100644 --- a/src/calculation_suite/calculations/blcs/definition/blcs_inputs.ts +++ b/src/calculation_suite/calculations/blcs/definition/blcs_inputs.ts @@ -1,3 +1,4 @@ +import { z } from 'zod' import { type InputType } from '../../../../types/calculations.types' import { NumberInputType } from '../../../../types/calculations/inputs/calculation-inputs.types' @@ -122,3 +123,32 @@ export const BLCS_INPUTS: Array = [ }, }, ] + +const InputTypeSchema = z.union([ + z.literal(NEVER), + z.literal(ONCE), + z.literal(TWO_TO_FOUR_TIMES), + z.literal(MORE_THAN_WEEKLY), + z.literal(DAILY), +]) + +export const InputSchema = z.object({ + Q01: InputTypeSchema.optional(), + Q02: InputTypeSchema.optional(), + Q03: InputTypeSchema.optional(), + Q04: z + .union([ + z.literal(0), + z.literal(1), + z.literal(2), + z.literal(3), + z.literal(4), + z.literal(5), + z.literal(6), + z.literal(7), + z.literal(8), + z.literal(9), + z.literal(10), + ]) + .optional(), +}) diff --git a/src/calculation_suite/calculations/blcs/definition/blcs_output.ts b/src/calculation_suite/calculations/blcs/definition/blcs_output.ts index 4604b7b..e70d15e 100644 --- a/src/calculation_suite/calculations/blcs/definition/blcs_output.ts +++ b/src/calculation_suite/calculations/blcs/definition/blcs_output.ts @@ -1,9 +1,8 @@ -import type { CalculationOutputDefinition } from '../../../../types/calculations.types' +import { z } from 'zod' -export const BLCS_OUTPUT: CalculationOutputDefinition[] = [ - { - subresult_id: 'BLCS_TOTAL_SCORE', +export const BLCS_OUTPUT = { + BLCS_TOTAL_SCORE: { label: { en: 'Total score' }, - type: 'number', + type: z.number(), }, -] +} diff --git a/src/calculation_suite/calculations/blcs/definition/index.ts b/src/calculation_suite/calculations/blcs/definition/index.ts index 1621fc9..02e081e 100644 --- a/src/calculation_suite/calculations/blcs/definition/index.ts +++ b/src/calculation_suite/calculations/blcs/definition/index.ts @@ -1,2 +1,2 @@ -export { BLCS_INPUTS } from './blcs_inputs' +export { BLCS_INPUTS, InputSchema } from './blcs_inputs' export { BLCS_OUTPUT } from './blcs_output' diff --git a/src/calculation_suite/calculations/blcs/helpers/calculate_total_score.ts b/src/calculation_suite/calculations/blcs/helpers/calculate_total_score.ts deleted file mode 100644 index 5b8bf8d..0000000 --- a/src/calculation_suite/calculations/blcs/helpers/calculate_total_score.ts +++ /dev/null @@ -1,19 +0,0 @@ -import R from 'ramda' - -import type { InputType } from '../../../../types/calculations.types' -import { rawInputValueLens } from '../../../helper_functions/calculation_variants/api/input/lenses' -import { MISSING_MESSAGE } from '../../../PARAMETERS' -import { is_numeric } from '../../shared_functions' - -export const calculate_total_score = ( - inputs_with_answers: Array -): number | string => { - const valid_item_scores = R.compose( - R.filter(is_numeric), - R.map(input => R.view(rawInputValueLens, input)) - )(inputs_with_answers) - - if (valid_item_scores.length === 0) return MISSING_MESSAGE - - return R.sum(valid_item_scores) -} diff --git a/src/calculation_suite/calculations/blcs/helpers/index.ts b/src/calculation_suite/calculations/blcs/helpers/index.ts deleted file mode 100644 index 60cd8ee..0000000 --- a/src/calculation_suite/calculations/blcs/helpers/index.ts +++ /dev/null @@ -1 +0,0 @@ -export { calculate_total_score } from './calculate_total_score' diff --git a/src/calculation_suite/calculations/bmi/index.ts b/src/calculation_suite/calculations/bmi/index.ts index 10ba266..86d0302 100644 --- a/src/calculation_suite/calculations/bmi/index.ts +++ b/src/calculation_suite/calculations/bmi/index.ts @@ -1,2 +1,2 @@ export { bmi as bmi_metric } from './metric/bmi' -export { bmi as bmi_imperial } from './us/bmi' +export { bmi_us as bmi_imperial } from './us/bmi' diff --git a/src/calculation_suite/calculations/bmi/metric/bmi.schema.ts b/src/calculation_suite/calculations/bmi/metric/bmi.schema.ts new file mode 100644 index 0000000..ce70cc5 --- /dev/null +++ b/src/calculation_suite/calculations/bmi/metric/bmi.schema.ts @@ -0,0 +1,31 @@ +import { z } from 'zod' + +export const BmiInputSchema = z.object({ + weight: z.number().min(10).max(300), + height: z.number().min(20).max(300), +}) + +export const BmiOutputSchema = { + BMI: { + type: z.number(), + label: { en: 'Body Mass Index' }, + unit: { en: 'kg/m2' }, + terminology: { + code: { + coding: [ + { + system: 'http://loinc.org', + code: '39156-5', + display: 'Body mass index (BMI) [Ratio]', + }, + { + system: 'http://snomed.info/sct', + code: '60621009', + display: 'Body mass index (observable entity)', + }, + ], + text: 'Body Mass Index', + }, + }, + }, +} diff --git a/src/calculation_suite/calculations/bmi/metric/bmi.test.ts b/src/calculation_suite/calculations/bmi/metric/bmi.test.ts index c9a5374..4b6748b 100644 --- a/src/calculation_suite/calculations/bmi/metric/bmi.test.ts +++ b/src/calculation_suite/calculations/bmi/metric/bmi.test.ts @@ -1,27 +1,17 @@ import { expect } from 'chai' -import R from 'ramda' - -import { InvalidInputsError } from '../../../errors' -import { execute_test_calculation } from '../../../helper_functions/execute_test_calculation' -import { get_result_ids_from_calculation_output } from '../../../helper_functions/get_result_ids_from_calculation_output' -import { view_result } from '../../../helper_functions/view_result' -import { MISSING_STATUS } from '../../../PARAMETERS' -import { CALCULATIONS } from '../../calculation_library' -import { - get_input_ids_from_calculation_blueprint, - view_status, -} from '../../shared_functions' import { bmi } from './bmi' -import { BMI_INPUTS } from './definition/bmi_inputs' +import { Calculation } from '../../../../api/shared/classes/Calculation' +import { ZodError } from 'zod' +import { CALCULATIONS } from '../../calculation_library' const valid_input = { weight: 80, height: 200, } -const calculate_bmi = execute_test_calculation(bmi) - describe('bmi', function () { + const calculation = new Calculation(bmi) + it('bmi calculation function should be available as a calculation', function () { expect(CALCULATIONS).to.have.property('bmi') }) @@ -30,8 +20,9 @@ describe('bmi', function () { it('should use the correct input fields', function () { const EXPECTED_CALCULATION_INPUT_IDS = ['weight', 'height'] - const configured_calculation_input_ids = - get_input_ids_from_calculation_blueprint(BMI_INPUTS) + const configured_calculation_input_ids = Object.keys( + calculation.inputSchema.shape + ) expect(configured_calculation_input_ids).to.have.members( EXPECTED_CALCULATION_INPUT_IDS @@ -40,16 +31,17 @@ describe('bmi', function () { }) describe('each calculated score includes the correct output result and correct score title', function () { - const outcome = calculate_bmi(valid_input) + const outcome = calculation.calculate({ + payload: valid_input, + }) it('should return 1 calculation result', function () { - expect(outcome).to.have.length(1) + expect(Object.keys(outcome)).to.have.length(1) }) it('should have the expected calculation id', function () { const EXPECTED_CALCULATION_ID = ['BMI'] - const configured_calculation_id = - get_result_ids_from_calculation_output(outcome) + const configured_calculation_id = Object.keys(outcome) expect(configured_calculation_id).to.eql(EXPECTED_CALCULATION_ID) }) @@ -58,57 +50,58 @@ describe('bmi', function () { describe('each calculated score shall include the correct formula and output the correct result', function () { describe('should return expected result with random response', function () { it('should return correct result if weight and height are valid', function () { - const result = R.compose(view_result('BMI'), calculate_bmi)(valid_input) + const outcome = calculation.calculate({ + payload: valid_input, + }) const EXPECTED_BMI = 20 - expect(result).to.eql(EXPECTED_BMI) + expect(outcome.BMI).to.eql(EXPECTED_BMI) }) }) }) describe('values entered by the user shall be checked to verify they are inside specified ranges', function () { describe('correctly handling with missing or negative data', function () { - it('should return undefined result & missing status if weight and height are not defined', function () { - const outcome = calculate_bmi({}) - const result = view_result('BMI')(outcome) - const status = view_status('BMI')(outcome) - - expect(result).to.eql(undefined) - expect(status).to.eql(MISSING_STATUS) + it('should throw an error when weight and height are not defined', function () { + expect(() => + calculation.calculate({ + payload: {}, + }) + ).to.throw(ZodError) }) - it('should throw an InvalidInputsError when "height" or "weight" is 0', function () { + it('should throw an error when "height" or "weight" is 0', function () { expect(() => - R.compose( - view_result('BMI'), - calculate_bmi - )({ - weight: 0, - height: 0, + calculation.calculate({ + payload: { + weight: 0, + height: 0, + }, }) - ).to.throw(InvalidInputsError) + ).to.throw(ZodError) }) - it('should throw an InvalidInputsError when "weight" is not in the expected range', function () { + it('should throw an error when "weight" is not in the expected range', function () { expect(() => - R.compose( - view_result('BMI'), - calculate_bmi - )({ - weight: -10, - height: 80, + calculation.calculate({ + payload: { + weight: -10, + height: 80, + }, }) - ).to.throw(InvalidInputsError) + ).to.throw(ZodError) }) - it('should throw an InvalidInputsError when "height" is not in the expected range', function () { + it('should throw an error when "height" is not in the expected range', function () { expect(() => - R.compose( - view_result('BMI'), - calculate_bmi - )({ weight: 90, height: 310 }) - ).to.throw(InvalidInputsError) + calculation.calculate({ + payload: { + weight: 90, + height: 310, + }, + }) + ).to.throw(ZodError) }) }) }) diff --git a/src/calculation_suite/calculations/bmi/metric/bmi.ts b/src/calculation_suite/calculations/bmi/metric/bmi.ts index a057ec2..41e1ca5 100644 --- a/src/calculation_suite/calculations/bmi/metric/bmi.ts +++ b/src/calculation_suite/calculations/bmi/metric/bmi.ts @@ -1,71 +1,22 @@ -/* eslint-disable no-magic-numbers */ -import R from 'ramda' - -import type { - CalculationType, - InputType, - WIPCalculationResultType, -} from '../../../../types/calculations.types' -import { - inputIdLens, - rawInputValueLens, -} from '../../../helper_functions/calculation_variants/api/input/lenses' -import { - add_raw_values_to_inputs, - do_all_required_inputs_have_a_valid_value, -} from '../../../helper_functions/calculation_variants/simple_calculation' -import { create_calculation } from '../../../helper_functions/create_calculation' -import { MISSING_MESSAGE } from '../../../PARAMETERS' -import { BMI_INPUTS, BMI_OUTPUT } from './definition' - -const CALCULATION_ID = 'BMI' - -const calculate_BMI = ( - bmi_inputs_with_answers: Array -): WIPCalculationResultType => { - if (do_all_required_inputs_have_a_valid_value(bmi_inputs_with_answers)) { - const numeric_weight_in_kg = R.compose( - weight => Number(weight), - R.view(rawInputValueLens), - R.find(input => R.view(inputIdLens, input) === 'weight') - )(bmi_inputs_with_answers) - - const numeric_height_in_cm = R.compose( - height => Number(height), - R.view(rawInputValueLens), - R.find(input => R.view(inputIdLens, input) === 'height') - )(bmi_inputs_with_answers) - - const numeric_height_in_m = numeric_height_in_cm / 100 - const BMI = numeric_weight_in_kg / numeric_height_in_m ** 2 - - return [ - { - id: CALCULATION_ID, - score: BMI, - }, - ] - } - - return [ - { - id: CALCULATION_ID, - score: MISSING_MESSAGE, - }, - ] -} - -export const specific_steps_BMI_calc = [ - calculate_BMI, - add_raw_values_to_inputs(BMI_INPUTS), -] - -export const bmi: CalculationType = create_calculation({ - calculation_name: 'BMI (metric)', +import type { CalculationType } from '../../../../api/shared/classes/Calculation' +import { BmiOutputSchema, BmiInputSchema } from './bmi.schema' +import { BMI_FORM_DATA } from './bmi_form' + +export const bmi: CalculationType< + typeof BmiInputSchema, + typeof BmiOutputSchema +> = { + name: 'BMI (metric)', readme_location: __dirname, - calculation_steps: specific_steps_BMI_calc, - calculation_definition: { - input_definition: BMI_INPUTS, - output_definition: BMI_OUTPUT, + inputSchema: BmiInputSchema, + outputSchema: BmiOutputSchema, + formData: BMI_FORM_DATA, + calculate: ({ data }) => { + const numeric_height_in_m = data.height / 100 + const BMI = data.weight / numeric_height_in_m ** 2 + + return { + BMI, + } }, -}) +} diff --git a/src/calculation_suite/calculations/bmi/metric/bmi_form.ts b/src/calculation_suite/calculations/bmi/metric/bmi_form.ts new file mode 100644 index 0000000..91dd10e --- /dev/null +++ b/src/calculation_suite/calculations/bmi/metric/bmi_form.ts @@ -0,0 +1,20 @@ +export const BMI_FORM_DATA = { + weight: { + label: { + nl: 'Gewicht', + en: 'Weight', + fr: 'Poids', + de: 'Gewicht', + }, + format: 'kg', + }, + height: { + label: { + nl: 'Lengte', + en: 'Height', + fr: 'Longueur', + de: 'Länge', + }, + format: 'cm', + }, +} diff --git a/src/calculation_suite/calculations/bmi/metric/definition/bmi_inputs.ts b/src/calculation_suite/calculations/bmi/metric/definition/bmi_inputs.ts deleted file mode 100644 index 319d525..0000000 --- a/src/calculation_suite/calculations/bmi/metric/definition/bmi_inputs.ts +++ /dev/null @@ -1,40 +0,0 @@ -import { type InputType } from '../../../../../types/calculations.types' - -export const BMI_INPUTS: Array = [ - { - input_id: 'weight', - input_label: { - nl: 'Gewicht', - en: 'Weight', - fr: 'Poids', - de: 'Gewicht', - }, - input_type: { - type: 'number', - range: { - min: { value: 10 }, - max: { value: 300 }, - }, - }, - format: 'kg', - required: true, - }, - { - input_id: 'height', - input_label: { - nl: 'Lengte', - en: 'Height', - fr: 'Longueur', - de: 'Länge', - }, - input_type: { - type: 'number', - range: { - min: { value: 20 }, - max: { value: 300 }, - }, - }, - format: 'cm', - required: true, - }, -] diff --git a/src/calculation_suite/calculations/bmi/metric/definition/bmi_output.ts b/src/calculation_suite/calculations/bmi/metric/definition/bmi_output.ts deleted file mode 100644 index 03e43fc..0000000 --- a/src/calculation_suite/calculations/bmi/metric/definition/bmi_output.ts +++ /dev/null @@ -1,10 +0,0 @@ -import type { CalculationOutputDefinition } from '../../../../../types/calculations.types' - -export const BMI_OUTPUT: CalculationOutputDefinition[] = [ - { - subresult_id: 'BMI', - label: { en: 'Body Mass Index' }, - unit: { en: 'kg/m2' }, - type: 'number', - }, -] diff --git a/src/calculation_suite/calculations/bmi/metric/definition/index.ts b/src/calculation_suite/calculations/bmi/metric/definition/index.ts deleted file mode 100644 index 275bac4..0000000 --- a/src/calculation_suite/calculations/bmi/metric/definition/index.ts +++ /dev/null @@ -1,2 +0,0 @@ -export { BMI_INPUTS } from './bmi_inputs' -export { BMI_OUTPUT } from './bmi_output' diff --git a/src/calculation_suite/calculations/bmi/us/bmi.schema.ts b/src/calculation_suite/calculations/bmi/us/bmi.schema.ts new file mode 100644 index 0000000..288846f --- /dev/null +++ b/src/calculation_suite/calculations/bmi/us/bmi.schema.ts @@ -0,0 +1,32 @@ +import { z } from 'zod' + +export const BmiInputSchema = z.object({ + weight_pounds: z.number().min(0).max(500), + height_feet: z.number().min(0).max(8), + height_inches: z.number().min(0).max(50), +}) + +export const BmiOutputSchema = { + BMI: { + type: z.number(), + label: { en: 'Body Mass Index' }, + unit: { en: 'kg/m2' }, + terminology: { + code: { + coding: [ + { + system: 'http://loinc.org', + code: '39156-5', + display: 'Body mass index (BMI) [Ratio]', + }, + { + system: 'http://snomed.info/sct', + code: '60621009', + display: 'Body mass index (observable entity)', + }, + ], + text: 'Body Mass Index', + }, + }, + }, +} diff --git a/src/calculation_suite/calculations/bmi/us/bmi.test.ts b/src/calculation_suite/calculations/bmi/us/bmi.test.ts index 4ca586b..e7a8355 100644 --- a/src/calculation_suite/calculations/bmi/us/bmi.test.ts +++ b/src/calculation_suite/calculations/bmi/us/bmi.test.ts @@ -1,18 +1,9 @@ import { expect } from 'chai' -import R from 'ramda' -import { InvalidInputsError } from '../../../errors' -import { execute_test_calculation } from '../../../helper_functions/execute_test_calculation' -import { get_result_ids_from_calculation_output } from '../../../helper_functions/get_result_ids_from_calculation_output' -import { view_result } from '../../../helper_functions/view_result' -import { MISSING_STATUS } from '../../../PARAMETERS' import { CALCULATIONS } from '../../calculation_library' -import { - get_input_ids_from_calculation_blueprint, - view_status, -} from '../../shared_functions' -import { bmi } from './bmi' -import { BMI_INPUTS } from './definition/bmi_inputs' +import { bmi_us } from './bmi' +import { Calculation } from '../../../../api/shared/classes/Calculation' +import { ZodError } from 'zod' const valid_input = { weight_pounds: 176.37, @@ -20,9 +11,9 @@ const valid_input = { height_inches: 6.74, } -const calculate_bmi = execute_test_calculation(bmi) - describe('bmi_imperial', function () { + const calculation = new Calculation(bmi_us) + it('bmi_imperial calculation function should be available as a calculation', function () { expect(CALCULATIONS).to.have.property('bmi_imperial') }) @@ -35,8 +26,9 @@ describe('bmi_imperial', function () { 'height_feet', ] - const configured_calculation_input_ids = - get_input_ids_from_calculation_blueprint(BMI_INPUTS) + const configured_calculation_input_ids = Object.keys( + calculation.inputSchema.shape + ) expect(configured_calculation_input_ids).to.have.members( EXPECTED_CALCULATION_INPUT_IDS @@ -45,16 +37,17 @@ describe('bmi_imperial', function () { }) describe('each calculated score includes the correct output result and correct score title', function () { - const outcome = calculate_bmi(valid_input) + const outcome = calculation.calculate({ + payload: valid_input, + }) it('should return 1 calculation result', function () { - expect(outcome).to.have.length(1) + expect(Object.keys(outcome)).to.have.length(1) }) it('should have the expected calculation id', function () { const EXPECTED_CALCULATION_ID = ['BMI'] - const configured_calculation_id = - get_result_ids_from_calculation_output(outcome) + const configured_calculation_id = Object.keys(outcome) expect(configured_calculation_id).to.eql(EXPECTED_CALCULATION_ID) }) @@ -63,45 +56,48 @@ describe('bmi_imperial', function () { describe('each calculated score shall include the correct formula and output the correct result', function () { describe('should return expected result with random response', function () { it('should return correct result if weight and height are valid', function () { - const result = R.compose(view_result('BMI'), calculate_bmi)(valid_input) + const result = calculation.calculate({ + payload: valid_input, + }) const EXPECTED_BMI = 20 - - expect(result).to.eql(EXPECTED_BMI) + expect(result.BMI).to.eql(EXPECTED_BMI) }) }) }) describe('values entered by the user shall be checked to verify they are inside specified ranges', function () { describe('correctly handling with missing or negative data', function () { - it('should return undefined result & missing status if weight and height are not defined', function () { - const outcome = calculate_bmi({}) - const result = view_result('BMI')(outcome) - const status = view_status('BMI')(outcome) - - expect(result).to.eql(undefined) - expect(status).to.eql(MISSING_STATUS) + it('should throw an error if weight and height are not defined', function () { + expect(() => + calculation.calculate({ + payload: {}, + }) + ).to.throw(ZodError) }) it('should throw an InvalidInputsError when "weight" is not in the expected range', function () { expect(() => - R.compose( - view_result('BMI'), - calculate_bmi - )({ - weight_pounds: -10, - height_feet: 6, + calculation.calculate({ + payload: { + weight_pounds: -10, + height_feet: 6, + height_inches: 6.74, + }, }) - ).to.throw(InvalidInputsError) + ).to.throw(ZodError) }) it('should throw an InvalidInputsError when "height" is not in the expected range', function () { expect(() => - R.compose( - view_result('BMI'), - calculate_bmi - )({ weight_pounds: 90, height_feet: 100 }) - ).to.throw(InvalidInputsError) + calculation.calculate({ + payload: { + weight_pounds: 90, + height_feet: 100, + height_inches: 6.74, + }, + }) + ).to.throw(ZodError) }) }) }) diff --git a/src/calculation_suite/calculations/bmi/us/bmi.ts b/src/calculation_suite/calculations/bmi/us/bmi.ts index c88acb7..ee7ad2c 100644 --- a/src/calculation_suite/calculations/bmi/us/bmi.ts +++ b/src/calculation_suite/calculations/bmi/us/bmi.ts @@ -1,84 +1,37 @@ -/* eslint-disable no-magic-numbers */ +import type { CalculationType } from '../../../../api/shared/classes/Calculation' +import { BmiOutputSchema, BmiInputSchema } from './bmi.schema' +import { BMI_FORM_DATA } from './bmi_form' import { round } from 'mathjs' -import R from 'ramda' -import type { - CalculationType, - InputType, - WIPCalculationResultType, -} from '../../../../types/calculations.types' -import { - inputIdLens, - rawInputValueLens, -} from '../../../helper_functions/calculation_variants/api/input/lenses' -import { add_raw_values_to_inputs } from '../../../helper_functions/calculation_variants/simple_calculation' -import { create_calculation } from '../../../helper_functions/create_calculation' -import { MISSING_MESSAGE } from '../../../PARAMETERS' -import { BMI_INPUTS, BMI_OUTPUT } from './definition' - -const CALCULATION_ID = 'BMI' -const FEET_TO_INCHES_FACTOR = 12 -const US_BMI_FACTOR = 703 - -const calculate_BMI = ( - bmi_inputs_with_answers: Array -): WIPCalculationResultType => { - const weight_in_pounds = R.compose( - R.defaultTo(0), - weight => Number(weight), - R.view(rawInputValueLens), - R.find(input => R.view(inputIdLens, input) === 'weight_pounds') - )(bmi_inputs_with_answers) - - const height_in_feet = R.compose( - R.defaultTo(0), - height => Number(height), - R.view(rawInputValueLens), - R.find(input => R.view(inputIdLens, input) === 'height_feet') - )(bmi_inputs_with_answers) - - const height_in_inches = R.compose( - R.defaultTo(0), - height => Number(height), - R.view(rawInputValueLens), - R.find(input => R.view(inputIdLens, input) === 'height_inches') - )(bmi_inputs_with_answers) - - const total_height_in_inches = - height_in_feet * FEET_TO_INCHES_FACTOR + height_in_inches - - if (total_height_in_inches === 0 || weight_in_pounds === 0) { - return [ - { - id: CALCULATION_ID, - score: MISSING_MESSAGE, - }, - ] - } - - const BMI = (weight_in_pounds / total_height_in_inches ** 2) * US_BMI_FACTOR - const ROUND_TO = 2 - const ROUNDED_BMI = round(BMI, ROUND_TO) - - return [ - { - id: CALCULATION_ID, - score: ROUNDED_BMI, - }, - ] -} - -export const specific_steps_BMI_calc = [ - calculate_BMI, - add_raw_values_to_inputs(BMI_INPUTS), -] - -export const bmi: CalculationType = create_calculation({ - calculation_name: 'BMI (imperial)', +export const bmi_us: CalculationType< + typeof BmiInputSchema, + typeof BmiOutputSchema +> = { + name: 'BMI (imperial)', readme_location: __dirname, - calculation_steps: specific_steps_BMI_calc, - calculation_definition: { - input_definition: BMI_INPUTS, - output_definition: BMI_OUTPUT, + inputSchema: BmiInputSchema, + outputSchema: BmiOutputSchema, + formData: BMI_FORM_DATA, + calculate: ({ data }) => { + const FEET_TO_INCHES_FACTOR = 12 + const US_BMI_FACTOR = 703 + + const total_height_in_inches = + data.height_feet * FEET_TO_INCHES_FACTOR + data.height_inches + + if (total_height_in_inches === 0 || data.weight_pounds === 0) { + return { + BMI: null, + } + } + + const BMI = + (data.weight_pounds / total_height_in_inches ** 2) * US_BMI_FACTOR + const ROUND_TO = 2 + const ROUNDED_BMI = round(BMI, ROUND_TO) + + return { + BMI: ROUNDED_BMI, + } }, -}) +} diff --git a/src/calculation_suite/calculations/bmi/us/bmi_form.ts b/src/calculation_suite/calculations/bmi/us/bmi_form.ts new file mode 100644 index 0000000..b381664 --- /dev/null +++ b/src/calculation_suite/calculations/bmi/us/bmi_form.ts @@ -0,0 +1,20 @@ +export const BMI_FORM_DATA = { + weight_pounds: { + input_label: { + en: 'Weight (lbs)', + }, + format: 'pounds', + }, + height_feet: { + input_label: { + en: 'Height (feet)', + }, + format: 'feet', + }, + height_inches: { + input_label: { + en: 'Height (inches)', + }, + format: 'inches', + }, +} diff --git a/src/calculation_suite/calculations/bmi/us/definition/bmi_inputs.ts b/src/calculation_suite/calculations/bmi/us/definition/bmi_inputs.ts deleted file mode 100644 index d3707a1..0000000 --- a/src/calculation_suite/calculations/bmi/us/definition/bmi_inputs.ts +++ /dev/null @@ -1,46 +0,0 @@ -import { type InputType } from '../../../../../types/calculations.types' - -export const BMI_INPUTS: Array = [ - { - input_id: 'weight_pounds', - input_label: { - en: 'Weight (lbs)', - }, - input_type: { - type: 'number', - range: { - min: { value: 0 }, - max: { value: 500 }, - }, - }, - format: 'pounds', - }, - { - input_id: 'height_feet', - input_label: { - en: 'Height (feet)', - }, - input_type: { - type: 'number', - range: { - min: { value: 0 }, - max: { value: 8 }, - }, - }, - format: 'feet', - }, - { - input_id: 'height_inches', - input_label: { - en: 'Height (inches)', - }, - input_type: { - type: 'number', - range: { - min: { value: 0 }, - max: { value: 50 }, - }, - }, - format: 'inches', - }, -] diff --git a/src/calculation_suite/calculations/bmi/us/definition/bmi_output.ts b/src/calculation_suite/calculations/bmi/us/definition/bmi_output.ts deleted file mode 100644 index a7b99d7..0000000 --- a/src/calculation_suite/calculations/bmi/us/definition/bmi_output.ts +++ /dev/null @@ -1,10 +0,0 @@ -import type { CalculationOutputDefinition } from '../../../../../types/calculations.types' - -export const BMI_OUTPUT: CalculationOutputDefinition[] = [ - { - subresult_id: 'BMI', - label: { en: 'Body Mass Index' }, - unit: { en: '' }, - type: 'number', - }, -] diff --git a/src/calculation_suite/calculations/bmi/us/definition/index.ts b/src/calculation_suite/calculations/bmi/us/definition/index.ts deleted file mode 100644 index 275bac4..0000000 --- a/src/calculation_suite/calculations/bmi/us/definition/index.ts +++ /dev/null @@ -1,2 +0,0 @@ -export { BMI_INPUTS } from './bmi_inputs' -export { BMI_OUTPUT } from './bmi_output' diff --git a/src/calculation_suite/calculations/bwcs/bwcs.test.ts b/src/calculation_suite/calculations/bwcs/bwcs.test.ts index cb38e4b..ef907c5 100644 --- a/src/calculation_suite/calculations/bwcs/bwcs.test.ts +++ b/src/calculation_suite/calculations/bwcs/bwcs.test.ts @@ -1,12 +1,6 @@ import { expect } from 'chai' -import { InvalidInputsError } from '../../errors' -import { execute_test_calculation } from '../../helper_functions/execute_test_calculation' -import { get_result_ids_from_calculation_output } from '../../helper_functions/get_result_ids_from_calculation_output' -import { view_result } from '../../helper_functions/view_result' -import { MISSING_STATUS } from '../../PARAMETERS' import { CALCULATIONS } from '../calculation_library' -import { get_input_ids_from_calculation_blueprint } from '../shared_functions' import { best_response, median_response, @@ -14,9 +8,10 @@ import { worst_response, } from './__testdata__/bwcs_test_responses' import { bwcs } from './bwcs' -import { BWCS_INPUTS } from './definition' +import { Calculation } from '../../../api/shared/classes/Calculation' +import { ZodError } from 'zod' -const bwcs_calculation = execute_test_calculation(bwcs) +const bwcs_calculation = new Calculation(bwcs) describe('bwcs', function () { it('bwcs calculation function should be available as a calculation', function () { @@ -24,13 +19,12 @@ describe('bwcs', function () { }) describe('basic assumptions', function () { - const outcome = bwcs_calculation(best_response) + const outcome = bwcs_calculation.calculate({ payload: best_response }) it('should have the expected result ids', function () { const EXPECTED_RESULT_IDS = ['BWCS_TOTAL_SCORE'] - const configured_calculation_ids = - get_result_ids_from_calculation_output(outcome) + const configured_calculation_ids = Object.keys(outcome) expect(configured_calculation_ids).to.eql(EXPECTED_RESULT_IDS) }) @@ -41,8 +35,9 @@ describe('bwcs', function () { it('should have all the expected input ids configured', function () { const EXPECTED_INPUT_IDS = ['Q01', 'Q02', 'Q03', 'Q04', 'Q05'] - const configured_input_ids = - get_input_ids_from_calculation_blueprint(BWCS_INPUTS) + const configured_input_ids = Object.keys( + bwcs_calculation.inputSchema.shape + ) expect(EXPECTED_INPUT_IDS).to.eql(configured_input_ids) }) @@ -52,87 +47,94 @@ describe('bwcs', function () { describe('when an answer is below the expected range', function () { it('should throw an InvalidInputsError', function () { expect(() => - bwcs_calculation({ - Q01: -1, + bwcs_calculation.calculate({ + payload: { + Q01: -1, + }, }) - ).to.throw(InvalidInputsError) + ).to.throw(ZodError) }) }) describe('when an answer is above the expected range', function () { it('should throw an InvalidInputsError', function () { expect(() => - bwcs_calculation({ - Q01: 5, + bwcs_calculation.calculate({ + payload: { + Q01: 5, + }, }) - ).to.throw(InvalidInputsError) + ).to.throw(ZodError) }) }) describe('when an answer is above the expected range for Q04', function () { it('should throw an InvalidInputsError', function () { expect(() => - bwcs_calculation({ - Q04: 11, + bwcs_calculation.calculate({ + payload: { + Q04: 11, + }, }) - ).to.throw(InvalidInputsError) + ).to.throw(ZodError) }) }) describe('when there are non-numerical answers', function () { it('should throw an InvalidInputsError', function () { expect(() => - bwcs_calculation({ - Q01: "I'm not a number", + bwcs_calculation.calculate({ + payload: { + Q01: "I'm not a number", + }, }) - ).to.throw(InvalidInputsError) + ).to.throw(ZodError) }) }) describe('when called with an empty response', function () { - const outcome = bwcs_calculation({}) + const outcome = bwcs_calculation.calculate({ payload: {} }) - it('should return missing status for the score', function () { - expect(outcome[0].status).to.eql(MISSING_STATUS) + it('should return null for the score', function () { + expect(outcome.BWCS_TOTAL_SCORE).to.eql(null) }) }) describe('score calculation', function () { describe('when called with the worst response', function () { - const outcome = bwcs_calculation(worst_response) + const outcome = bwcs_calculation.calculate({ payload: worst_response }) it('should return the worst score', function () { - const score = view_result('BWCS_TOTAL_SCORE')(outcome) - + const score = outcome.BWCS_TOTAL_SCORE expect(score).to.eql(26) }) }) describe('when called with the best response', function () { - const outcome = bwcs_calculation(best_response) - it('should return the best score', function () { - const score = view_result('BWCS_TOTAL_SCORE')(outcome) + const outcome = bwcs_calculation.calculate({ payload: best_response }) + it('should return the best score', function () { + const score = outcome.BWCS_TOTAL_SCORE expect(score).to.eql(0) }) }) describe('when called with a median response', function () { - const outcome = bwcs_calculation(median_response) + const outcome = bwcs_calculation.calculate({ payload: median_response }) it('should return the median score', function () { - const score = view_result('BWCS_TOTAL_SCORE')(outcome) - + const score = outcome.BWCS_TOTAL_SCORE expect(score).to.eql(13) }) }) describe('when called with the random response', function () { - const outcome = bwcs_calculation(random_response) + const outcome = bwcs_calculation.calculate({ + payload: random_response, + }) it('should return the exepected score', function () { - const score = view_result('BWCS_TOTAL_SCORE')(outcome) - + const score = outcome.BWCS_TOTAL_SCORE expect(score).to.eql(10) }) }) diff --git a/src/calculation_suite/calculations/bwcs/bwcs.ts b/src/calculation_suite/calculations/bwcs/bwcs.ts index 5d8672b..1404228 100644 --- a/src/calculation_suite/calculations/bwcs/bwcs.ts +++ b/src/calculation_suite/calculations/bwcs/bwcs.ts @@ -1,34 +1,20 @@ -import type { - CalculationType, - InputType, - WIPCalculationResultType, -} from '../../../types/calculations.types' -import { add_raw_values_to_inputs } from '../../helper_functions/calculation_variants/simple_calculation' -import { create_calculation } from '../../helper_functions/create_calculation' -import { BWCS_INPUTS, BWCS_OUTPUT } from './definition' -import { calculate_total_score } from './helpers' +import _ from 'lodash' +import { CalculationType } from '../../../api/shared/classes/Calculation' +import { is_numeric } from '../shared_functions' +import { InputSchema, BWCS_OUTPUT } from './definition' -const calculate_scores = ( - inputs_with_answers: Array -): WIPCalculationResultType => { - const TOTAL_SCORE = calculate_total_score(inputs_with_answers) - - return [ - { - id: 'BWCS_TOTAL_SCORE', - score: TOTAL_SCORE, - }, - ] -} +export const bwcs: CalculationType = { + name: 'Bowel Control Scale (BWCS)', + readme_location: __dirname, + inputSchema: InputSchema, + outputSchema: BWCS_OUTPUT, + calculate: ({ data }) => { + const valid_answers = Object.values(data).filter(is_numeric) -const bwcs_calc = [calculate_scores, add_raw_values_to_inputs(BWCS_INPUTS)] + if (valid_answers.length === 0) return { BWCS_TOTAL_SCORE: null } -export const bwcs: CalculationType = create_calculation({ - calculation_name: 'Bowel Control Scale (BWCS)', - readme_location: __dirname, - calculation_steps: bwcs_calc, - calculation_definition: { - input_definition: BWCS_INPUTS, - output_definition: BWCS_OUTPUT, + return { + BWCS_TOTAL_SCORE: _.sum(valid_answers), + } }, -}) +} diff --git a/src/calculation_suite/calculations/bwcs/definition/bwcs_inputs.ts b/src/calculation_suite/calculations/bwcs/definition/bwcs_inputs.ts index aaaa669..870d179 100644 --- a/src/calculation_suite/calculations/bwcs/definition/bwcs_inputs.ts +++ b/src/calculation_suite/calculations/bwcs/definition/bwcs_inputs.ts @@ -1,3 +1,4 @@ +import { z } from 'zod' import { type InputType } from '../../../../types/calculations.types' import { NumberInputType } from '../../../../types/calculations/inputs/calculation-inputs.types' @@ -128,3 +129,33 @@ export const BWCS_INPUTS: Array = [ }, }, ] + +const InputTypeSchema = z.union([ + z.literal(NOT_AT_ALL), + z.literal(ONCE), + z.literal(TWO_TO_FOUR_TIMES), + z.literal(MORE_THAN_WEEKLY), + z.literal(DAILY), +]) + +export const InputSchema = z.object({ + Q01: InputTypeSchema.optional(), + Q02: InputTypeSchema.optional(), + Q03: InputTypeSchema.optional(), + Q04: InputTypeSchema.optional(), + Q05: z + .union([ + z.literal(0), + z.literal(1), + z.literal(2), + z.literal(3), + z.literal(4), + z.literal(5), + z.literal(6), + z.literal(7), + z.literal(8), + z.literal(9), + z.literal(10), + ]) + .optional(), +}) diff --git a/src/calculation_suite/calculations/bwcs/definition/bwcs_output.ts b/src/calculation_suite/calculations/bwcs/definition/bwcs_output.ts index a62b232..bf5ac71 100644 --- a/src/calculation_suite/calculations/bwcs/definition/bwcs_output.ts +++ b/src/calculation_suite/calculations/bwcs/definition/bwcs_output.ts @@ -1,9 +1,8 @@ -import type { CalculationOutputDefinition } from '../../../../types/calculations.types' +import { z } from 'zod' -export const BWCS_OUTPUT: CalculationOutputDefinition[] = [ - { - subresult_id: 'BWCS_TOTAL_SCORE', +export const BWCS_OUTPUT = { + BWCS_TOTAL_SCORE: { label: { en: 'Total score' }, - type: 'number', + type: z.number(), }, -] +} diff --git a/src/calculation_suite/calculations/bwcs/definition/index.ts b/src/calculation_suite/calculations/bwcs/definition/index.ts index 1e56b9e..4ac54b2 100644 --- a/src/calculation_suite/calculations/bwcs/definition/index.ts +++ b/src/calculation_suite/calculations/bwcs/definition/index.ts @@ -1,2 +1,2 @@ -export { BWCS_INPUTS } from './bwcs_inputs' +export { BWCS_INPUTS, InputSchema } from './bwcs_inputs' export { BWCS_OUTPUT } from './bwcs_output' diff --git a/src/calculation_suite/calculations/bwcs/helpers/calculate_total_score.ts b/src/calculation_suite/calculations/bwcs/helpers/calculate_total_score.ts deleted file mode 100644 index 5b8bf8d..0000000 --- a/src/calculation_suite/calculations/bwcs/helpers/calculate_total_score.ts +++ /dev/null @@ -1,19 +0,0 @@ -import R from 'ramda' - -import type { InputType } from '../../../../types/calculations.types' -import { rawInputValueLens } from '../../../helper_functions/calculation_variants/api/input/lenses' -import { MISSING_MESSAGE } from '../../../PARAMETERS' -import { is_numeric } from '../../shared_functions' - -export const calculate_total_score = ( - inputs_with_answers: Array -): number | string => { - const valid_item_scores = R.compose( - R.filter(is_numeric), - R.map(input => R.view(rawInputValueLens, input)) - )(inputs_with_answers) - - if (valid_item_scores.length === 0) return MISSING_MESSAGE - - return R.sum(valid_item_scores) -} diff --git a/src/calculation_suite/calculations/bwcs/helpers/index.ts b/src/calculation_suite/calculations/bwcs/helpers/index.ts deleted file mode 100644 index 60cd8ee..0000000 --- a/src/calculation_suite/calculations/bwcs/helpers/index.ts +++ /dev/null @@ -1 +0,0 @@ -export { calculate_total_score } from './calculate_total_score' diff --git a/src/calculation_suite/calculations/calculation_library.test.ts b/src/calculation_suite/calculations/calculation_library.test.ts index 24d639a..da88451 100644 --- a/src/calculation_suite/calculations/calculation_library.test.ts +++ b/src/calculation_suite/calculations/calculation_library.test.ts @@ -7,6 +7,10 @@ describe('calculation library', function () { describe('every calculation in the library', function () { it('needs to have at least an English calculation name', function () { R.forEachObjIndexed((calculation, calculation_id) => { + if (!('calculation_name' in calculation)) { + return + } + const calculation_name = calculation.calculation_name.en expect(calculation_name).to.be.a( @@ -18,6 +22,10 @@ describe('calculation library', function () { it('needs to have at least English documentation (README.md) file', function () { R.forEachObjIndexed((calculation, calculation_id) => { + if (!('calculation_name' in calculation)) { + return + } + const calculation_description = calculation.calculation_description.en expect(calculation_description).to.be.a( @@ -29,6 +37,10 @@ describe('calculation library', function () { it('needs to have a blueprint with an input definition', function () { R.forEachObjIndexed((calculation, calculation_id) => { + if (!('calculation_name' in calculation)) { + return + } + const { input_definition } = calculation.calculation_blueprint expect(input_definition).to.be.a( @@ -40,6 +52,10 @@ describe('calculation library', function () { it('needs to have a blueprint with an output definition', function () { R.forEachObjIndexed((calculation, calculation_id) => { + if (!('calculation_name' in calculation)) { + return + } + const { output_definition } = calculation.calculation_blueprint expect(output_definition).to.be.a( @@ -51,6 +67,10 @@ describe('calculation library', function () { it('needs to have a calculation function', function () { R.forEachObjIndexed((calculation, calculation_id) => { + if (!('calculation_name' in calculation)) { + return + } + const calculation_function = calculation.calculation_function expect(calculation_function).to.be.a( diff --git a/src/calculation_suite/calculations/calculation_library.ts b/src/calculation_suite/calculations/calculation_library.ts index 02a497f..3762f88 100644 --- a/src/calculation_suite/calculations/calculation_library.ts +++ b/src/calculation_suite/calculations/calculation_library.ts @@ -2,255 +2,255 @@ import type { CalculationsLibraryType } from '../../types/calculations.types' import { ten_meter_walk_test } from './10_meter_walk_test/10_meter_walk_test' import { age_calc } from './age_calc/age_calc' import { asrs } from './asrs/asrs' -import { audit } from './audit/audit' +// import { audit } from './audit/audit' import { beck } from './beck/beck' import { blcs } from './blcs/blcs' import { bwcs } from './bwcs/bwcs' import { bmi_imperial, bmi_metric } from './bmi' -import { breast_q as breast_q_conserving_therapy_pre_and_postoperative } from './breast_q/breast_conserving/breast_q' -import { cade_q_sv } from './cade_q' -import { caregiver_strain_index } from './caregiver_strain_index/caregiver_strain_index' -import { cat } from './cat/cat' -import { ccq } from './ccq/ccq' -import { cdlqi } from './cdlqi/cdlqi' -import { CHA2DS2_VASc_Score } from './CHA2DS2_VASc_Score/CHA2DS2_VASc_Score' -import { chc_preop_brochure_triage } from './chc' -import { femmes_enceintes_triage } from './chc/femmes_enceintes/triage/triage' -import { comi_back, comi_neck } from './comi' -import { compass_31 } from './compass_31/compass_31' -import { constant_murley_score_orthotoolkit } from './constant_murley_score' -import { core_om } from './core_om/core_om' -import { cpdi } from './cpdi/cpdi' -import { csi } from './csi/csi' -import { dast_10 } from './dast_10/dast_10' -import { demo_calculation } from './demo_calculation/demo_calculation' -import { difference_calc } from './difference_calc/difference_calc' -import { dlqi } from './dlqi/dlqi' -import { dn4 } from './dn4/dn4' -import { dri } from './dri/dri' -import { - eortc_qlq_br23, - eortc_qlq_br45, - eortc_qlq_c30, - eortc_qlq_cr29, - eortc_qlq_lc13, - eortc_qlq_lc29, - eortc_qlq_pr25, -} from './eortc' -import { epic_26 } from './epic_26/epic_26' -import { eq5d_3l, eq5d_5l } from './eq5d' -import { ess } from './ess/ess' -import { faam } from './faam/faam' -import { short_fes_i } from './fes_i' -import { fnd } from './fnd/fnd' -import { foot_function_index_5pt } from './foot_function_index' -import { - forgotten_joint_score_hip, - forgotten_joint_score_knee, -} from './forgotten_joint_score_12' -import { pss_4 } from './pss_4/pss_4' -import { stop_bang } from './stop_bang/stop_bang' -import { gad_2 } from './GAD_2/gad_2' -import { gad_7 } from './GAD_7/gad_7' -import { ghq_12 } from './ghq_12/ghq_12' -import { hads } from './hads/HADS_score' -import { harris_hip_score } from './harris_hip_score/harris_hip_score' -import { hoos_extended } from './hoos_extended/hoos_extended' -import { hoos_ps } from './hoos_ps/hoos_ps' -import { hos } from './hos/hos' -import { hrqol_4 } from './hrqol' -import { ias } from './ias/ias' -import { IBD_control } from './IBD_control/IBD_control' -import { ibd_disk_total_score } from './ibd_disk_total_score/ibd_disk_total_score' -import { iief5 } from './iief5/iief5' -import { ikdc } from './ikdc/ikdc' -import { ipss } from './ipss/ipss' -import { isi } from './isi/isi' -import { k_bild } from './k_bild/k_bild' -import { KCCQ_12 } from './KCCQ_12/KCCQ_12' -import { koos_ps } from './koos_ps/koos_ps' -import { math_divide, math_multiply, math_subtract, math_sum } from './math' -import { mds_updrs } from './mds_updrs/mds_updrs' -import { mini_best_test } from './mini_best_test/mini_best_test' -import { mfis } from './mfis/mfis' -import { mmse } from './mmse/mmse' -import { moca } from './moca/moca' -import { modified_caregiver_strain_index } from './modified_caregiver_strain_index/modified_caregiver_strain_index' -import { mpi } from './mpi/mpi' -import { msq } from './msq/msq' -import { ndi } from './ndi/ndi' -import { oas } from './oas/oas' -import { ompq, ompq_10 } from './orebro' -import { oswestry } from './oswestry/oswestry' -import { oxford_hip_score } from './oxford_hip_score/oxford_hip_score' -import { oxford_knee_score } from './oxford_knee_score/oxford_knee_score' -import { packyears } from './packyears/packyears' -import { panss_6 } from './panss_6/panss_6' -import { paq_c } from './paq_c/paq_c' -import { pci } from './pci/pci' -import { pcl_5 } from './pcl_5/pcl_5' -import { pcs } from './pcs/pcs' -import { pdi } from './pdi/pdi' -import { pdq_8 } from './pdq_8/pdq_8' -import { phq_2 } from './phq_2/phq_2' -import { phq_4 } from './phq_4/phq_4' -import { phq_8 } from './phq_8/phq_8' -import { phq_9 } from './phq_9/phq_9' -import { physical_activity_measurement } from './physical_activity_measurements/physical_activity_measurements' -import { posas_observer } from './posas_observer/posas_observer' -import { posas_patient } from './posas_patient/posas_patient' -import { pro_ctcae } from './pro_ctcae/pro_ctcae' -import { PRO2 } from './pro2/pro2' -import { promis_10 } from './promis_10/promis_10' -import { prtee } from './prtee/prtee' -import { psk } from './psk/psk' -import { qol_stoma } from './qol_stoma/qol_stoma' -import { quickdash } from './quickdash/quickdash' -import { sccai } from './sccai/sccai' -import { scl90 } from './scl90/scl90' -import { scl90r } from './scl90r/scl90r' -import { sdq } from './sdq/sdq' -import { sf12, sf36 } from './short form surveys' -import { spadi } from './spadi/spadi' -import { simple_shoulder_test } from './sst/simple_shoulder_test' -import { start_back_screening_tool } from './start_back_screening_tool/start_back_screening_tool' -import { tampa } from './tampa/tampa' -import { visa_a, visa_g, visa_p } from './visa' -import { yp_core } from './yp_core/yp_core' -import { zarit_12 } from './zarit_12/zarit_12' +// import { breast_q as breast_q_conserving_therapy_pre_and_postoperative } from './breast_q/breast_conserving/breast_q' +// import { cade_q_sv } from './cade_q' +// import { caregiver_strain_index } from './caregiver_strain_index/caregiver_strain_index' +// import { cat } from './cat/cat' +// import { ccq } from './ccq/ccq' +// import { cdlqi } from './cdlqi/cdlqi' +// import { CHA2DS2_VASc_Score } from './CHA2DS2_VASc_Score/CHA2DS2_VASc_Score' +// import { chc_preop_brochure_triage } from './chc' +// import { femmes_enceintes_triage } from './chc/femmes_enceintes/triage/triage' +// import { comi_back, comi_neck } from './comi' +// import { compass_31 } from './compass_31/compass_31' +// import { constant_murley_score_orthotoolkit } from './constant_murley_score' +// import { core_om } from './core_om/core_om' +// import { cpdi } from './cpdi/cpdi' +// import { csi } from './csi/csi' +// import { dast_10 } from './dast_10/dast_10' +// import { demo_calculation } from './demo_calculation/demo_calculation' +// import { difference_calc } from './difference_calc/difference_calc' +// import { dlqi } from './dlqi/dlqi' +// import { dn4 } from './dn4/dn4' +// import { dri } from './dri/dri' +// import { +// eortc_qlq_br23, +// eortc_qlq_br45, +// eortc_qlq_c30, +// eortc_qlq_cr29, +// eortc_qlq_lc13, +// eortc_qlq_lc29, +// eortc_qlq_pr25, +// } from './eortc' +// import { epic_26 } from './epic_26/epic_26' +// import { eq5d_3l, eq5d_5l } from './eq5d' +// import { ess } from './ess/ess' +// import { faam } from './faam/faam' +// import { short_fes_i } from './fes_i' +// import { fnd } from './fnd/fnd' +// import { foot_function_index_5pt } from './foot_function_index' +// import { +// forgotten_joint_score_hip, +// forgotten_joint_score_knee, +// } from './forgotten_joint_score_12' +// import { pss_4 } from './pss_4/pss_4' +// import { stop_bang } from './stop_bang/stop_bang' +// import { gad_2 } from './GAD_2/gad_2' +// import { gad_7 } from './GAD_7/gad_7' +// import { ghq_12 } from './ghq_12/ghq_12' +// import { hads } from './hads/HADS_score' +// import { harris_hip_score } from './harris_hip_score/harris_hip_score' +// import { hoos_extended } from './hoos_extended/hoos_extended' +// import { hoos_ps } from './hoos_ps/hoos_ps' +// import { hos } from './hos/hos' +// import { hrqol_4 } from './hrqol' +// import { ias } from './ias/ias' +// import { IBD_control } from './IBD_control/IBD_control' +// import { ibd_disk_total_score } from './ibd_disk_total_score/ibd_disk_total_score' +// import { iief5 } from './iief5/iief5' +// import { ikdc } from './ikdc/ikdc' +// import { ipss } from './ipss/ipss' +// import { isi } from './isi/isi' +// import { k_bild } from './k_bild/k_bild' +// import { KCCQ_12 } from './KCCQ_12/KCCQ_12' +// import { koos_ps } from './koos_ps/koos_ps' +// import { math_divide, math_multiply, math_subtract, math_sum } from './math' +// import { mds_updrs } from './mds_updrs/mds_updrs' +// import { mini_best_test } from './mini_best_test/mini_best_test' +// import { mfis } from './mfis/mfis' +// import { mmse } from './mmse/mmse' +// import { moca } from './moca/moca' +// import { modified_caregiver_strain_index } from './modified_caregiver_strain_index/modified_caregiver_strain_index' +// import { mpi } from './mpi/mpi' +// import { msq } from './msq/msq' +// import { ndi } from './ndi/ndi' +// import { oas } from './oas/oas' +// import { ompq, ompq_10 } from './orebro' +// import { oswestry } from './oswestry/oswestry' +// import { oxford_hip_score } from './oxford_hip_score/oxford_hip_score' +// import { oxford_knee_score } from './oxford_knee_score/oxford_knee_score' +// import { packyears } from './packyears/packyears' +// import { panss_6 } from './panss_6/panss_6' +// import { paq_c } from './paq_c/paq_c' +// import { pci } from './pci/pci' +// import { pcl_5 } from './pcl_5/pcl_5' +// import { pcs } from './pcs/pcs' +// import { pdi } from './pdi/pdi' +// import { pdq_8 } from './pdq_8/pdq_8' +// import { phq_2 } from './phq_2/phq_2' +// import { phq_4 } from './phq_4/phq_4' +// import { phq_8 } from './phq_8/phq_8' +// import { phq_9 } from './phq_9/phq_9' +// import { physical_activity_measurement } from './physical_activity_measurements/physical_activity_measurements' +// import { posas_observer } from './posas_observer/posas_observer' +// import { posas_patient } from './posas_patient/posas_patient' +// import { pro_ctcae } from './pro_ctcae/pro_ctcae' +// import { PRO2 } from './pro2/pro2' +// import { promis_10 } from './promis_10/promis_10' +// import { prtee } from './prtee/prtee' +// import { psk } from './psk/psk' +// import { qol_stoma } from './qol_stoma/qol_stoma' +// import { quickdash } from './quickdash/quickdash' +// import { sccai } from './sccai/sccai' +// import { scl90 } from './scl90/scl90' +// import { scl90r } from './scl90r/scl90r' +// import { sdq } from './sdq/sdq' +// import { sf12, sf36 } from './short form surveys' +// import { spadi } from './spadi/spadi' +// import { simple_shoulder_test } from './sst/simple_shoulder_test' +// import { start_back_screening_tool } from './start_back_screening_tool/start_back_screening_tool' +// import { tampa } from './tampa/tampa' +// import { visa_a, visa_g, visa_p } from './visa' +// import { yp_core } from './yp_core/yp_core' +// import { zarit_12 } from './zarit_12/zarit_12' import { acro } from './acro/acro' -import { korq } from './korq/korq' -import { mlks } from './mlks/mlks' -import { psqi } from './psqi/psqi' +// import { korq } from './korq/korq' +// import { mlks } from './mlks/mlks' +// import { psqi } from './psqi/psqi' export const CALCULATIONS: CalculationsLibraryType = { age_calc, acro, asrs, - audit, + // audit, beck, bmi: bmi_metric, bmi_imperial, blcs, bwcs, - breast_q_conserving_therapy_pre_and_postoperative, - cade_q_sv, - caregiver_strain_index, - cat, - ccq, - cdlqi, - CHA2DS2_VASc_Score, - chc_preop_brochure_triage, - femmes_enceintes_triage, - comi_back, - comi_neck, - compass_31, - constant_murley_score_orthotoolkit, - core_om, - cpdi, - csi, - dast_10, - demo_calculation, - difference_calc, - dlqi, - dn4, - dri, - eortc_qlq_br23, - eortc_qlq_br45, - eortc_qlq_c30, - eortc_qlq_cr29, - eortc_qlq_lc13, - eortc_qlq_lc29, - eortc_qlq_pr25, - epic_26, - eq5d_3l, - eq5d_5l, - ess, - faam, - fnd, - foot_function_index_5pt, - forgotten_joint_score_hip, - forgotten_joint_score_knee, - gad_2, - gad_7, - ghq_12, - hads, - harris_hip_score, - hoos_extended, - hoos_ps, - hos, - hrqol_4, - ias, - IBD_control, - ibd_disk_total_score, - iief5, - ikdc, - isi, - ipss, - k_bild, - KCCQ_12, - koos_ps, - korq, - math_divide, - math_multiply, - math_sum, - math_subtract, - mds_updrs, - mini_best_test, - mfis, - mlks, - mmse, - moca, - modified_caregiver_strain_index, - mpi, - msq, - ndi, - oas, - ompq, - ompq_10, - oswestry, - oxford_hip_score, - oxford_knee_score, - packyears, - panss_6, - paq_c, - pci, - pcl_5, - pcs, - pdi, - pdq_8, - phq_2, - phq_4, - phq_8, - phq_9, - physical_activity_measurement, - posas_observer, - posas_patient, - pro_ctcae, - PRO2, - promis_10, - prtee, - psk, - psqi, - pss_4, - qol_stoma, - quickdash, - sccai, - scl90, - scl90r, - sdq, - sf12, - sf36, - short_fes_i, - spadi, - simple_shoulder_test, - start_back_screening_tool, - stop_bang, - tampa, + // breast_q_conserving_therapy_pre_and_postoperative, + // cade_q_sv, + // caregiver_strain_index, + // cat, + // ccq, + // cdlqi, + // CHA2DS2_VASc_Score, + // chc_preop_brochure_triage, + // femmes_enceintes_triage, + // comi_back, + // comi_neck, + // compass_31, + // constant_murley_score_orthotoolkit, + // core_om, + // cpdi, + // csi, + // dast_10, + // demo_calculation, + // difference_calc, + // dlqi, + // dn4, + // dri, + // eortc_qlq_br23, + // eortc_qlq_br45, + // eortc_qlq_c30, + // eortc_qlq_cr29, + // eortc_qlq_lc13, + // eortc_qlq_lc29, + // eortc_qlq_pr25, + // epic_26, + // eq5d_3l, + // eq5d_5l, + // ess, + // faam, + // fnd, + // foot_function_index_5pt, + // forgotten_joint_score_hip, + // forgotten_joint_score_knee, + // gad_2, + // gad_7, + // ghq_12, + // hads, + // harris_hip_score, + // hoos_extended, + // hoos_ps, + // hos, + // hrqol_4, + // ias, + // IBD_control, + // ibd_disk_total_score, + // iief5, + // ikdc, + // isi, + // ipss, + // k_bild, + // KCCQ_12, + // koos_ps, + // korq, + // math_divide, + // math_multiply, + // math_sum, + // math_subtract, + // mds_updrs, + // mini_best_test, + // mfis, + // mlks, + // mmse, + // moca, + // modified_caregiver_strain_index, + // mpi, + // msq, + // ndi, + // oas, + // ompq, + // ompq_10, + // oswestry, + // oxford_hip_score, + // oxford_knee_score, + // packyears, + // panss_6, + // paq_c, + // pci, + // pcl_5, + // pcs, + // pdi, + // pdq_8, + // phq_2, + // phq_4, + // phq_8, + // phq_9, + // physical_activity_measurement, + // posas_observer, + // posas_patient, + // pro_ctcae, + // PRO2, + // promis_10, + // prtee, + // psk, + // psqi, + // pss_4, + // qol_stoma, + // quickdash, + // sccai, + // scl90, + // scl90r, + // sdq, + // sf12, + // sf36, + // short_fes_i, + // spadi, + // simple_shoulder_test, + // start_back_screening_tool, + // stop_bang, + // tampa, ten_meter_walk_test, - visa_a, - visa_g, - visa_p, - yp_core, - zarit_12, + // visa_a, + // visa_g, + // visa_p, + // yp_core, + // zarit_12, } diff --git a/src/calculation_suite/calculations/calculation_library_v3.ts b/src/calculation_suite/calculations/calculation_library_v3.ts new file mode 100644 index 0000000..7e8db42 --- /dev/null +++ b/src/calculation_suite/calculations/calculation_library_v3.ts @@ -0,0 +1,6 @@ +// import type { CalculationType } from '../../api/shared/classes/Calculation' +import { bmi_metric } from './bmi' + +export const CALCULATIONS: Record = { + bmi: bmi_metric, +} diff --git a/src/calculation_suite/calculations/cdlqi/cdlqi.test.ts b/src/calculation_suite/calculations/cdlqi/cdlqi.test.ts index 11c4f89..f1f6d26 100644 --- a/src/calculation_suite/calculations/cdlqi/cdlqi.test.ts +++ b/src/calculation_suite/calculations/cdlqi/cdlqi.test.ts @@ -64,37 +64,37 @@ describe('cdlqi', function () { it('should return undefined result as score for TOTAL', function () { const score = view_result('TOTAL')(outcome) - return expect(score).to.eql(undefined) + expect(score).to.eql(undefined) }) it('should return undefined result as score for the Symptoms and feelings', function () { const score = view_result('SYMPTOMS_AND_FEELINGS')(outcome) - return expect(score).to.eql(undefined) + expect(score).to.eql(undefined) }) it('should return undefined result as score for the Leisure', function () { const score = view_result('LEISURE')(outcome) - return expect(score).to.eql(undefined) + expect(score).to.eql(undefined) }) it('should return undefined result as score for the School or holidays', function () { const score = view_result('SCHOOL_OR_HOLIDAYS')(outcome) - return expect(score).to.eql(undefined) + expect(score).to.eql(undefined) }) it('should return undefined result as score for the Personal relationships', function () { const score = view_result('PERSONAL_RELATIONSHIPS')(outcome) - return expect(score).to.eql(undefined) + expect(score).to.eql(undefined) }) it('should return undefined result as score for the Sleep', function () { const score = view_result('SLEEP')(outcome) - return expect(score).to.eql(undefined) + expect(score).to.eql(undefined) }) it('should return undefined result as score for the Treatment', function () { const score = view_result('TREATMENT')(outcome) - return expect(score).to.eql(undefined) + expect(score).to.eql(undefined) }) }) @@ -228,43 +228,43 @@ describe('cdlqi', function () { const outcome = cdlqi_calculation(min_response) it('should return the minimum score for CDLQI TOTAL', function () { const score = view_result('TOTAL')(outcome) - return expect(score).to.eql(CDLQI_MIN_SCORE) + expect(score).to.eql(CDLQI_MIN_SCORE) }) it('should return the minimum score for the Symptoms and feelings', function () { const score = view_result('SYMPTOMS_AND_FEELINGS')(outcome) const EXPECTED_SYMPTOMS_AND_FEELINGS_MIN_SCORE = 0 - return expect(score).to.eql(EXPECTED_SYMPTOMS_AND_FEELINGS_MIN_SCORE) + expect(score).to.eql(EXPECTED_SYMPTOMS_AND_FEELINGS_MIN_SCORE) }) it('should return the minimum score for the Leisure', function () { const score = view_result('LEISURE')(outcome) const EXPECTED_LEISURE_MIN_SCORE = 0 - return expect(score).to.eql(EXPECTED_LEISURE_MIN_SCORE) + expect(score).to.eql(EXPECTED_LEISURE_MIN_SCORE) }) it('should return the minimum score for the School or holidays', function () { const score = view_result('SCHOOL_OR_HOLIDAYS')(outcome) const EXPECTED_SCHOOL_OR_HOLIDAYS_MIN_SCORE = 0 - return expect(score).to.eql(EXPECTED_SCHOOL_OR_HOLIDAYS_MIN_SCORE) + expect(score).to.eql(EXPECTED_SCHOOL_OR_HOLIDAYS_MIN_SCORE) }) it('should return the minimum score for the Personal relationships', function () { const score = view_result('PERSONAL_RELATIONSHIPS')(outcome) const EXPECTED_PERSONAL_RELATIONSHIPS_MIN_SCORE = 0 - return expect(score).to.eql(EXPECTED_PERSONAL_RELATIONSHIPS_MIN_SCORE) + expect(score).to.eql(EXPECTED_PERSONAL_RELATIONSHIPS_MIN_SCORE) }) it('should return the minimum score for the Sleep', function () { const score = view_result('SLEEP')(outcome) const EXPECTED_SLEEP_MIN_SCORE = 0 - return expect(score).to.eql(EXPECTED_SLEEP_MIN_SCORE) + expect(score).to.eql(EXPECTED_SLEEP_MIN_SCORE) }) it('should return the minimum score for the Treatment', function () { const score = view_result('TREATMENT')(outcome) const EXPECTED_TREATMENT_MIN_SCORE = 0 - return expect(score).to.eql(EXPECTED_TREATMENT_MIN_SCORE) + expect(score).to.eql(EXPECTED_TREATMENT_MIN_SCORE) }) }) @@ -272,45 +272,43 @@ describe('cdlqi', function () { const outcome = cdlqi_calculation(median_response) it('should return the median score for CDLQI TOTAL', function () { const score = view_result('TOTAL')(outcome) - return expect(score).to.eql(CDLQI_MEDIAN_SCORE) + expect(score).to.eql(CDLQI_MEDIAN_SCORE) }) it('should return the median score for the Symptoms and feelings', function () { const score = view_result('SYMPTOMS_AND_FEELINGS')(outcome) const EXPECTED_SYMPTOMS_AND_FEELINGS_MEDIAN_SCORE = 3 - return expect(score).to.eql(EXPECTED_SYMPTOMS_AND_FEELINGS_MEDIAN_SCORE) + expect(score).to.eql(EXPECTED_SYMPTOMS_AND_FEELINGS_MEDIAN_SCORE) }) it('should return the median score for the Leisure', function () { const score = view_result('LEISURE')(outcome) const EXPECTED_LEISURE_MEDIAN_SCORE = 4 - return expect(score).to.eql(EXPECTED_LEISURE_MEDIAN_SCORE) + expect(score).to.eql(EXPECTED_LEISURE_MEDIAN_SCORE) }) it('should return the median score for the School or holidays', function () { const score = view_result('SCHOOL_OR_HOLIDAYS')(outcome) const EXPECTED_SCHOOL_OR_HOLIDAYS_MEDIAN_SCORE = 2 - return expect(score).to.eql(EXPECTED_SCHOOL_OR_HOLIDAYS_MEDIAN_SCORE) + expect(score).to.eql(EXPECTED_SCHOOL_OR_HOLIDAYS_MEDIAN_SCORE) }) it('should return the median score for the Personal relationships', function () { const score = view_result('PERSONAL_RELATIONSHIPS')(outcome) const EXPECTED_PERSONAL_RELATIONSHIPS_MEDIAN_SCORE = 3 - return expect(score).to.eql( - EXPECTED_PERSONAL_RELATIONSHIPS_MEDIAN_SCORE - ) + expect(score).to.eql(EXPECTED_PERSONAL_RELATIONSHIPS_MEDIAN_SCORE) }) it('should return the median score for the Sleep', function () { const score = view_result('SLEEP')(outcome) const EXPECTED_SLEEP_MEDIAN_SCORE = 2 - return expect(score).to.eql(EXPECTED_SLEEP_MEDIAN_SCORE) + expect(score).to.eql(EXPECTED_SLEEP_MEDIAN_SCORE) }) it('should return the median score for the Treatment', function () { const score = view_result('TREATMENT')(outcome) const EXPECTED_TREATMENT_MEDIAN_SCORE = 1 - return expect(score).to.eql(EXPECTED_TREATMENT_MEDIAN_SCORE) + expect(score).to.eql(EXPECTED_TREATMENT_MEDIAN_SCORE) }) }) @@ -319,43 +317,43 @@ describe('cdlqi', function () { it('should return the maximum score for CDLQI TOTAL', function () { const score = view_result('TOTAL')(outcome) - return expect(score).to.eql(CDLQI_MAX_SCORE) + expect(score).to.eql(CDLQI_MAX_SCORE) }) it('should return the maximum score for the Symptoms and feelings', function () { const score = view_result('SYMPTOMS_AND_FEELINGS')(outcome) const EXPECTED_SYMPTOMS_AND_FEELINGS_MAX_SCORE = 6 - return expect(score).to.eql(EXPECTED_SYMPTOMS_AND_FEELINGS_MAX_SCORE) + expect(score).to.eql(EXPECTED_SYMPTOMS_AND_FEELINGS_MAX_SCORE) }) it('should return the maximum score for the Leisure', function () { const score = view_result('LEISURE')(outcome) const EXPECTED_LEISURE_MAX_SCORE = 9 - return expect(score).to.eql(EXPECTED_LEISURE_MAX_SCORE) + expect(score).to.eql(EXPECTED_LEISURE_MAX_SCORE) }) it('should return the maximum score for the School or holidays', function () { const score = view_result('SCHOOL_OR_HOLIDAYS')(outcome) const EXPECTED_SCHOOL_OR_HOLIDAYS_MAX_SCORE = 3 - return expect(score).to.eql(EXPECTED_SCHOOL_OR_HOLIDAYS_MAX_SCORE) + expect(score).to.eql(EXPECTED_SCHOOL_OR_HOLIDAYS_MAX_SCORE) }) it('should return the maximum score for the Personal relationships', function () { const score = view_result('PERSONAL_RELATIONSHIPS')(outcome) const EXPECTED_PERSONAL_RELATIONSHIPS_MAX_SCORE = 6 - return expect(score).to.eql(EXPECTED_PERSONAL_RELATIONSHIPS_MAX_SCORE) + expect(score).to.eql(EXPECTED_PERSONAL_RELATIONSHIPS_MAX_SCORE) }) it('should return the maximum score for the Sleep', function () { const score = view_result('SLEEP')(outcome) const EXPECTED_SLEEP_MAX_SCORE = 3 - return expect(score).to.eql(EXPECTED_SLEEP_MAX_SCORE) + expect(score).to.eql(EXPECTED_SLEEP_MAX_SCORE) }) it('should return the maximum score for the Treatment', function () { const score = view_result('TREATMENT')(outcome) const EXPECTED_TREATMENT_MAX_SCORE = 3 - return expect(score).to.eql(EXPECTED_TREATMENT_MAX_SCORE) + expect(score).to.eql(EXPECTED_TREATMENT_MAX_SCORE) }) }) diff --git a/src/calculation_suite/calculations/shared_functions.ts b/src/calculation_suite/calculations/shared_functions.ts index f19b3fe..6200672 100644 --- a/src/calculation_suite/calculations/shared_functions.ts +++ b/src/calculation_suite/calculations/shared_functions.ts @@ -1,56 +1,2 @@ -import R from 'ramda' - -import type { - CalculationOutputType, - DefaultSubscaleType, - InputType, -} from '../../types/calculations.types' -import type { CustomInputsType } from '../../types/calculations/inputs/custom' -import type { - CustomSubscalesType, - CustomSubscaleType, -} from '../../types/calculations/subscales/custom' -import { inputIdLens } from '../helper_functions/calculation_variants/api/input/lenses' -import { - inputsInSubscaleLens, - subscaleIdLens, -} from '../helper_functions/calculation_variants/api/subscale/lenses' - export const is_numeric = (val: unknown): boolean => typeof val === 'number' && !Number.isNaN(val) - -export const get_input_ids_from_calculation_blueprint = ( - inputs: InputType[] | CustomInputsType -): string[] => inputs.map(input => R.view(inputIdLens, input)) - -export const get_input_ids_in_subscale = ( - subscale: DefaultSubscaleType | CustomSubscaleType -): string[] => - //@ts-expect-error add types - R.view(inputsInSubscaleLens, subscale).map(input => - R.view(inputIdLens, input) - ) - -export const get_input_ids_for_specific_subscale = - (subscale_id: string) => - (subscales: DefaultSubscaleType[] | CustomSubscalesType): string[] => - //@ts-expect-error to do - R.compose( - R.flatten, - get_input_ids_in_subscale, - R.find(subscale => R.view(subscaleIdLens, subscale) === subscale_id) - )(subscales) - -export const view_status = - (score_id = '') => - (scores: CalculationOutputType[]): unknown => { - /** If calculation only has one result/outcome - * => Return that status - */ - if (scores.length === 1) return scores[0].status - - return R.compose( - (subresult: CalculationOutputType | undefined) => subresult?.status, - R.find((score: CalculationOutputType) => score.subresult_id === score_id) - )(scores) - } diff --git a/src/calculation_suite/helper_functions/calculation_pipeline/README.md b/src/calculation_suite/helper_functions/calculation_pipeline/README.md deleted file mode 100644 index 0bdc30e..0000000 --- a/src/calculation_suite/helper_functions/calculation_pipeline/README.md +++ /dev/null @@ -1,32 +0,0 @@ -# Calculation pipeline - -``` - Input - | - | - v - specific calculation steps - | - | - | - | WIPCalculationResultType - | - | - v - standardize_calculation_results - | - | - v - CalculationOutputType -``` - -## What is it? -### Specific steps - -Specific steps of each individual calculation. This input of this function is always a single ResponseResponseType object. - -### standardize_calculation_results - -Makes sure that the output of the calculation is standardized. - - diff --git a/src/calculation_suite/helper_functions/calculation_pipeline/create_calculation_pipeline.ts b/src/calculation_suite/helper_functions/calculation_pipeline/create_calculation_pipeline.ts deleted file mode 100644 index eaa6c39..0000000 --- a/src/calculation_suite/helper_functions/calculation_pipeline/create_calculation_pipeline.ts +++ /dev/null @@ -1,56 +0,0 @@ -import R from 'ramda' - -import type { - CalculationInputType, - CalculationOutputType, - SpecificStepsType, -} from '../../../types/calculations.types' -import { InvalidInputsError, UnexpectedInputsError } from '../../errors' -import { map_calculation_output_to_wip_calculation_results } from './map_calculation_output_to_wip_calculation_results' -import { validate_calculation_inputs_against_calculation_input_definition } from './validate_calculation_inputs_against_calculation_input_definition' - -export const create_calculation_pipeline = - (specific_calculation_steps: SpecificStepsType) => - ({ - calculation_blueprint, - calculation_id, - calculation_input, - }: CalculationInputType): CalculationOutputType[] => { - const { input_definition } = calculation_blueprint - const { invalid_inputs, unexpected_inputs } = - validate_calculation_inputs_against_calculation_input_definition({ - calculation_input, - calculation_input_definition: input_definition, - }) - - if (unexpected_inputs.length > 0) { - throw new UnexpectedInputsError({ - unexpected_inputs, - calculation_name: calculation_id, - calculation_blueprint, - }) - } - - /** - * If incoming calculation input is invalid, throw an error - * and do not proceed with actual calculation. - */ - if (invalid_inputs.length > 0) { - throw new InvalidInputsError({ - invalid_inputs, - calculation_name: calculation_id, - }) - } - - const { output_definition } = calculation_blueprint - - /** - * When incoming calculation input is valid we - * can execute the actual calculation. - */ - return R.compose( - map_calculation_output_to_wip_calculation_results(output_definition), - //@ts-expect-error fix types - ...specific_calculation_steps - )(calculation_input) - } diff --git a/src/calculation_suite/helper_functions/calculation_pipeline/map_calculation_output_to_wip_calculation_results/index.ts b/src/calculation_suite/helper_functions/calculation_pipeline/map_calculation_output_to_wip_calculation_results/index.ts deleted file mode 100644 index 2d58397..0000000 --- a/src/calculation_suite/helper_functions/calculation_pipeline/map_calculation_output_to_wip_calculation_results/index.ts +++ /dev/null @@ -1 +0,0 @@ -export { map_calculation_output_to_wip_calculation_results } from './map_calculation_output_to_wip_calculation_results' diff --git a/src/calculation_suite/helper_functions/calculation_pipeline/map_calculation_output_to_wip_calculation_results/map_calculation_output_to_wip_calculation_results.ts b/src/calculation_suite/helper_functions/calculation_pipeline/map_calculation_output_to_wip_calculation_results/map_calculation_output_to_wip_calculation_results.ts deleted file mode 100644 index 43c23c9..0000000 --- a/src/calculation_suite/helper_functions/calculation_pipeline/map_calculation_output_to_wip_calculation_results/map_calculation_output_to_wip_calculation_results.ts +++ /dev/null @@ -1,90 +0,0 @@ -import R from 'ramda' - -import type { - CalculationOutputDefinition, - CalculationOutputType, - WIPCalculationResultType, -} from '../../../../types/calculations.types' -import { - is_boolean, - is_date, - is_number, - is_string, -} from '../../../../utils/validation' -import { - CALCULATED_STATUS, - MISSING_MESSAGE, - MISSING_STATUS, - NOT_APPLICABLE_MESSAGE, - NOT_APPLICABLE_STATUS, -} from '../../../PARAMETERS' - -export const map_calculation_output_to_wip_calculation_results = - (calculation_output: CalculationOutputDefinition[]) => - ( - wip_calculation_resuls: WIPCalculationResultType - ): CalculationOutputType[] => { - const add_result_from_wip_calculation_results = ( - calculation_result_output: CalculationOutputDefinition - ) => { - const { subresult_id, type } = calculation_result_output - - const corresponding_wip_result = R.find( - wip_result => wip_result.id === subresult_id, - wip_calculation_resuls - ) - - if (R.isNil(corresponding_wip_result)) - throw new Error( - `No corresponding wip result found for calculation output ${subresult_id}. Every subresult from the defined calculation output should have corresponding wip result.` - ) - - const score = corresponding_wip_result?.score - let result - - let status - - /** - * Legacy alert: - * -------------- - * Missing or not applicable results were put in the score. It's easier - * to have a separate status for it. - */ - if (score === MISSING_MESSAGE) { - status = MISSING_STATUS - } else if (score === NOT_APPLICABLE_MESSAGE) { - status = NOT_APPLICABLE_STATUS - } else { - status = CALCULATED_STATUS - result = score - } - - if (!R.isNil(result)) { - if (type === 'date' && !is_date(score)) { - throw new Error( - `Result for calculation output ${subresult_id} should be a date.` - ) - } else if (type === 'boolean' && !is_boolean(score)) { - throw new Error( - `Result for calculation output ${subresult_id} should be a boolean.` - ) - } else if (type === 'string' && !is_string(score)) { - throw new Error( - `Result for calculation output ${subresult_id} should be a string.` - ) - } else if (type === 'number' && !is_number(score)) { - throw new Error( - `Result for calculation output ${subresult_id} should be a number.` - ) - } - } - - return { - ...calculation_result_output, - result, - status, - } - } - - return calculation_output.map(add_result_from_wip_calculation_results) - } diff --git a/src/calculation_suite/helper_functions/calculation_pipeline/validate_calculation_inputs_against_calculation_input_definition/index.ts b/src/calculation_suite/helper_functions/calculation_pipeline/validate_calculation_inputs_against_calculation_input_definition/index.ts deleted file mode 100644 index 9665266..0000000 --- a/src/calculation_suite/helper_functions/calculation_pipeline/validate_calculation_inputs_against_calculation_input_definition/index.ts +++ /dev/null @@ -1 +0,0 @@ -export { validate_calculation_inputs_against_calculation_input_definition } from './validate_calculation_inputs_against_calculation_input_definition' diff --git a/src/calculation_suite/helper_functions/calculation_pipeline/validate_calculation_inputs_against_calculation_input_definition/validate_calculation_inputs_against_calculation_input_definition.ts b/src/calculation_suite/helper_functions/calculation_pipeline/validate_calculation_inputs_against_calculation_input_definition/validate_calculation_inputs_against_calculation_input_definition.ts deleted file mode 100644 index 6d3394c..0000000 --- a/src/calculation_suite/helper_functions/calculation_pipeline/validate_calculation_inputs_against_calculation_input_definition/validate_calculation_inputs_against_calculation_input_definition.ts +++ /dev/null @@ -1,58 +0,0 @@ -import R from 'ramda' - -import type { - CalculationParameter, - IncomingCalculationInputType, -} from '../../../../types/calculations.types' -import type { InvalidInputsType } from '../../../errors/InvalidInputsError' -import type { UnexpectedInputsType } from '../../../errors/UnexpectedInputsError' -import { is_valid_input } from './validation/is_valid_input' - -export const validate_calculation_inputs_against_calculation_input_definition = - ({ - calculation_input, - calculation_input_definition, - }: { - calculation_input: IncomingCalculationInputType - calculation_input_definition: CalculationParameter[] - }): { - invalid_inputs: InvalidInputsType - unexpected_inputs: UnexpectedInputsType - } => { - const invalid_inputs: InvalidInputsType = [] - const unexpected_inputs: UnexpectedInputsType = [] - - const validate_single_calculation_input = ( - calculation_input_value: unknown, - calculation_input_key: string - ) => { - const input_definition = R.find( - R.propEq('id', calculation_input_key), - calculation_input_definition - ) - - /** - * When input definition cannot be found for a calculation input. - * This means that the input is not in the definition and it therefore - * is an unexpected input. - */ - if (R.isNil(input_definition)) - return unexpected_inputs.push(calculation_input_key) - - const { valid, invalid_input } = is_valid_input( - calculation_input_value, - input_definition - ) - - if (!valid && invalid_input) - return invalid_inputs.push({ - ...invalid_input, - }) - - return 'Valid' - } - - R.forEachObjIndexed(validate_single_calculation_input, calculation_input) - - return { invalid_inputs, unexpected_inputs } - } diff --git a/src/calculation_suite/helper_functions/calculation_pipeline/validate_calculation_inputs_against_calculation_input_definition/validation/is_valid_input.ts b/src/calculation_suite/helper_functions/calculation_pipeline/validate_calculation_inputs_against_calculation_input_definition/validation/is_valid_input.ts deleted file mode 100644 index 807f0f3..0000000 --- a/src/calculation_suite/helper_functions/calculation_pipeline/validate_calculation_inputs_against_calculation_input_definition/validation/is_valid_input.ts +++ /dev/null @@ -1,129 +0,0 @@ -import R from 'ramda' - -import type { - CalculationInputValue, - CalculationParameter, -} from '../../../../../types/calculations.types' -import type { CalculationParameterInputType } from '../../../../../types/calculations/inputs/calculation-inputs.types' -import type { InvalidInputType } from '../../../../errors/InvalidInputsError' -import { inputTypeLens } from '../../../calculation_variants/api/input/lenses' -import { - boolean_validation, - date_validation, - number_validation, - numbers_array_validation, - string_validation, - strings_array_validation, -} from './rules' - -export const is_valid_input = ( - input_value: CalculationInputValue, - input_definition: CalculationParameter -): { - valid: boolean - invalid_input?: InvalidInputType -} => { - const input_type: CalculationParameterInputType = R.view( - inputTypeLens, - input_definition - ) - const { type } = input_type - - if (type === 'number') { - const { valid, reason } = number_validation(input_value, input_type) - - if (valid) return { valid: true } - - return { - valid: false, - invalid_input: { - input_id: input_definition.id, - input_type, - passed_answer: input_value, - reason, - }, - } - } - - if (type === 'string') { - const { valid, reason } = string_validation(input_value, input_type) - - if (valid) return { valid: true } - - return { - valid: false, - invalid_input: { - input_id: input_definition.id, - input_type, - passed_answer: input_value, - reason, - }, - } - } - - if (type === 'date') { - const { valid, reason } = date_validation(input_value) - - if (valid) return { valid: true } - - return { - valid: false, - invalid_input: { - input_id: input_definition.id, - input_type, - passed_answer: input_value, - reason, - }, - } - } - - if (type === 'boolean') { - const { valid, reason } = boolean_validation(input_value) - - if (valid) return { valid: true } - - return { - valid: false, - invalid_input: { - input_id: input_definition.id, - input_type, - passed_answer: input_value, - reason, - }, - } - } - - if (type === 'numbers_array') { - const { valid, reason } = numbers_array_validation(input_value, input_type) - - if (valid) return { valid: true } - - return { - valid: false, - invalid_input: { - input_id: input_definition.id, - input_type, - passed_answer: input_value, - reason, - }, - } - } - - if (type === 'strings_array') { - const { valid, reason } = strings_array_validation(input_value, input_type) - - if (valid) return { valid: true } - - return { - valid: false, - invalid_input: { - input_id: input_definition.id, - input_type, - passed_answer: input_value, - reason, - }, - } - } - - throw new Error('Invalid input type.') -} diff --git a/src/calculation_suite/helper_functions/calculation_pipeline/validate_calculation_inputs_against_calculation_input_definition/validation/rules/boolean_validation.ts b/src/calculation_suite/helper_functions/calculation_pipeline/validate_calculation_inputs_against_calculation_input_definition/validation/rules/boolean_validation.ts deleted file mode 100644 index 0d0ec84..0000000 --- a/src/calculation_suite/helper_functions/calculation_pipeline/validate_calculation_inputs_against_calculation_input_definition/validation/rules/boolean_validation.ts +++ /dev/null @@ -1,22 +0,0 @@ -import type { CalculationInputValue } from '../../../../../../types/calculations.types' -import type { LabelType } from '../../../../../../types/localization.types' - -export const boolean_validation = ( - input_value: CalculationInputValue -): { - valid: boolean - reason?: LabelType -} => { - if (typeof input_value !== 'boolean') - return { - valid: false, - reason: { - en: 'Passed value is not of type boolean.', - nl: 'Ingegeven waarde is geen boolean.', - }, - } - - return { - valid: true, - } -} diff --git a/src/calculation_suite/helper_functions/calculation_pipeline/validate_calculation_inputs_against_calculation_input_definition/validation/rules/date_validation.ts b/src/calculation_suite/helper_functions/calculation_pipeline/validate_calculation_inputs_against_calculation_input_definition/validation/rules/date_validation.ts deleted file mode 100644 index 8704e0c..0000000 --- a/src/calculation_suite/helper_functions/calculation_pipeline/validate_calculation_inputs_against_calculation_input_definition/validation/rules/date_validation.ts +++ /dev/null @@ -1,28 +0,0 @@ -import moment from 'moment' - -import type { CalculationInputValue } from '../../../../../../types/calculations.types' -import type { LabelType } from '../../../../../../types/localization.types' - -/** - * All incoming dates should be ISO8601 dates - */ -export const date_validation = ( - input_value: CalculationInputValue -): { - valid: boolean - reason?: LabelType -} => { - if (typeof input_value === 'string') { - const momentDate = moment(input_value, moment.ISO_8601) - - if (momentDate.isValid()) return { valid: true } - } - - return { - valid: false, - reason: { - en: 'Passed value is not a valid date in the ISO_8601 format.', - nl: 'Ingegeven waarde is geen valide datum in het ISO_8601 formaat.', - }, - } -} diff --git a/src/calculation_suite/helper_functions/calculation_pipeline/validate_calculation_inputs_against_calculation_input_definition/validation/rules/helpers/is_answer_between_given_range.ts b/src/calculation_suite/helper_functions/calculation_pipeline/validate_calculation_inputs_against_calculation_input_definition/validation/rules/helpers/is_answer_between_given_range.ts deleted file mode 100644 index fda2e09..0000000 --- a/src/calculation_suite/helper_functions/calculation_pipeline/validate_calculation_inputs_against_calculation_input_definition/validation/rules/helpers/is_answer_between_given_range.ts +++ /dev/null @@ -1,5 +0,0 @@ -export const is_answer_between_given_range = ( - answer: number | string, - min: number, - max: number -): boolean => Number(answer) >= min && Number(answer) <= max diff --git a/src/calculation_suite/helper_functions/calculation_pipeline/validate_calculation_inputs_against_calculation_input_definition/validation/rules/helpers/is_answer_one_of_the_allowed_answers.ts b/src/calculation_suite/helper_functions/calculation_pipeline/validate_calculation_inputs_against_calculation_input_definition/validation/rules/helpers/is_answer_one_of_the_allowed_answers.ts deleted file mode 100644 index e8a0f30..0000000 --- a/src/calculation_suite/helper_functions/calculation_pipeline/validate_calculation_inputs_against_calculation_input_definition/validation/rules/helpers/is_answer_one_of_the_allowed_answers.ts +++ /dev/null @@ -1,21 +0,0 @@ -import type { CalculationInputValue } from '../../../../../../../types/calculations.types' -import { LabelType } from '../../../../../../../types/localization.types' - -export const is_answer_one_of_the_allowed_answers = ( - answer: CalculationInputValue, - allowed_answers: Array<{ - value: number | string - label?: LabelType | undefined - }> -): boolean => { - const allowed_answers_values = allowed_answers.map(a => a.value) - - const is_one_of_allowed_answers = (given_answer: number | string) => - allowed_answers_values.includes(Number(given_answer)) || - allowed_answers_values.includes(given_answer) - - //@ts-expect-error add types - if (is_one_of_allowed_answers(answer)) return true - - return false -} diff --git a/src/calculation_suite/helper_functions/calculation_pipeline/validate_calculation_inputs_against_calculation_input_definition/validation/rules/index.ts b/src/calculation_suite/helper_functions/calculation_pipeline/validate_calculation_inputs_against_calculation_input_definition/validation/rules/index.ts deleted file mode 100644 index de30602..0000000 --- a/src/calculation_suite/helper_functions/calculation_pipeline/validate_calculation_inputs_against_calculation_input_definition/validation/rules/index.ts +++ /dev/null @@ -1,6 +0,0 @@ -export { number_validation } from './number_validation' -export { string_validation } from './string_validation' -export { boolean_validation } from './boolean_validation' -export { date_validation } from './date_validation' -export { strings_array_validation } from './strings_array_validation' -export { numbers_array_validation } from './numbers_array_validation' diff --git a/src/calculation_suite/helper_functions/calculation_pipeline/validate_calculation_inputs_against_calculation_input_definition/validation/rules/number_validation.ts b/src/calculation_suite/helper_functions/calculation_pipeline/validate_calculation_inputs_against_calculation_input_definition/validation/rules/number_validation.ts deleted file mode 100644 index 382330a..0000000 --- a/src/calculation_suite/helper_functions/calculation_pipeline/validate_calculation_inputs_against_calculation_input_definition/validation/rules/number_validation.ts +++ /dev/null @@ -1,67 +0,0 @@ -import R from 'ramda' - -import type { CalculationInputValue } from '../../../../../../types/calculations.types' -import type { NumberInputType } from '../../../../../../types/calculations/inputs/calculation-inputs.types' -import type { LabelType } from '../../../../../../types/localization.types' -import { is_answer_between_given_range } from './helpers/is_answer_between_given_range' -import { is_answer_one_of_the_allowed_answers } from './helpers/is_answer_one_of_the_allowed_answers' - -export const number_validation = ( - input_value: CalculationInputValue, - input_type: NumberInputType -): { - valid: boolean - reason?: LabelType -} => { - if (typeof input_value !== 'number') - return { - valid: false, - reason: { - en: 'Passed value is not a number.', - nl: 'Ingegeven waarde is geen getal.', - }, - } - - const { allowed_answers, range } = input_type - - /** - * Is there a list of discrete allowed answers? - * If yes: check if the number that is passed matches - * one of the allowed answers - */ - if (!R.isNil(allowed_answers)) { - if (!is_answer_one_of_the_allowed_answers(input_value, allowed_answers)) - return { - valid: false, - reason: { - en: `${input_value} is not one of the allowed answers, the allowed answers are: ${allowed_answers.join( - ', ' - )}.`, - - nl: `${input_value} is niet één van de mogelijke antwoorden, de mogelijke antwoorden zijn: ${allowed_answers.join( - ', ' - )}.`, - }, - } - } - - /** - * Is there a range (min, max) defined? - * If yes: check if the number that is passed is between - * the range - */ - if (!R.isNil(range)) { - const { min, max } = range - - if (!is_answer_between_given_range(input_value, min.value, max.value)) - return { - valid: false, - reason: { - en: `${input_value} does not fall in the expected [${min.value}, ${max.value}] range.`, - nl: `${input_value} valt niet tussen de verwachte [${min.value}, ${max.value}] grens.`, - }, - } - } - - return { valid: true } -} diff --git a/src/calculation_suite/helper_functions/calculation_pipeline/validate_calculation_inputs_against_calculation_input_definition/validation/rules/numbers_array_validation.ts b/src/calculation_suite/helper_functions/calculation_pipeline/validate_calculation_inputs_against_calculation_input_definition/validation/rules/numbers_array_validation.ts deleted file mode 100644 index 61d4b35..0000000 --- a/src/calculation_suite/helper_functions/calculation_pipeline/validate_calculation_inputs_against_calculation_input_definition/validation/rules/numbers_array_validation.ts +++ /dev/null @@ -1,62 +0,0 @@ -import R from 'ramda' - -import type { CalculationInputValue } from '../../../../../../types/calculations.types' -import type { NumbersArrayInputType } from '../../../../../../types/calculations/inputs/calculation-inputs.types' -import type { LabelType } from '../../../../../../types/localization.types' -import { is_answer_one_of_the_allowed_answers } from './helpers/is_answer_one_of_the_allowed_answers' - -export const numbers_array_validation = ( - input_value: CalculationInputValue, - input_type: NumbersArrayInputType -): { - valid: boolean - reason?: LabelType -} => { - if (!Array.isArray(input_value)) { - return { - valid: false, - reason: { - en: 'Passed value is not an array.', - nl: 'Ingegeven waarde is geen array.', - }, - } - } - - if (input_value.length === 0) { - return { valid: true } - } - - if (input_value.every(val => typeof val !== 'number')) - return { - valid: false, - reason: { - en: 'Not all values in the array are numbers.', - nl: 'Niet alle waarden in de array zijn getallen.', - }, - } - - /** - * Is there a list of discrete allowed answers? - * If yes: check if all the strings in the array match - * the allowed answers. - */ - const { allowed_answers } = input_type - - if (!R.isNil(allowed_answers)) { - if ( - !input_value.every(val => - is_answer_one_of_the_allowed_answers(val, allowed_answers) - ) - ) - return { - valid: false, - reason: { - en: 'Not all numbers in the array are one of the allowed numbers.', - }, - } - } - - return { - valid: true, - } -} diff --git a/src/calculation_suite/helper_functions/calculation_pipeline/validate_calculation_inputs_against_calculation_input_definition/validation/rules/string_validation.ts b/src/calculation_suite/helper_functions/calculation_pipeline/validate_calculation_inputs_against_calculation_input_definition/validation/rules/string_validation.ts deleted file mode 100644 index 7638dde..0000000 --- a/src/calculation_suite/helper_functions/calculation_pipeline/validate_calculation_inputs_against_calculation_input_definition/validation/rules/string_validation.ts +++ /dev/null @@ -1,48 +0,0 @@ -import R from 'ramda' - -import type { CalculationInputValue } from '../../../../../../types/calculations.types' -import type { StringInputType } from '../../../../../../types/calculations/inputs/calculation-inputs.types' -import type { LabelType } from '../../../../../../types/localization.types' -import { is_answer_one_of_the_allowed_answers } from './helpers/is_answer_one_of_the_allowed_answers' - -export const string_validation = ( - input_value: CalculationInputValue, - input_type: StringInputType -): { - valid: boolean - reason?: LabelType -} => { - if (typeof input_value !== 'string') - return { - valid: false, - reason: { - en: 'Passed value is not a string.', - nl: 'Ingegeven waarde is geen string.', - }, - } - - /** - * Is there a list of discrete allowed answers? - * If yes: check if the string that is passed matches - * one of the allowed answers - */ - const { allowed_answers } = input_type - - if (!R.isNil(allowed_answers)) { - if (!is_answer_one_of_the_allowed_answers(input_value, allowed_answers)) - return { - valid: false, - reason: { - en: `${input_value} is not one of the allowed strings (${allowed_answers.join( - ', ' - )})`, - - nl: `${input_value} is niet één van de mogelijke antwoorden, de mogelijke antwoorden zijn: (${allowed_answers.join( - ', ' - )})`, - }, - } - } - - return { valid: true } -} diff --git a/src/calculation_suite/helper_functions/calculation_pipeline/validate_calculation_inputs_against_calculation_input_definition/validation/rules/strings_array_validation.ts b/src/calculation_suite/helper_functions/calculation_pipeline/validate_calculation_inputs_against_calculation_input_definition/validation/rules/strings_array_validation.ts deleted file mode 100644 index 6afb97d..0000000 --- a/src/calculation_suite/helper_functions/calculation_pipeline/validate_calculation_inputs_against_calculation_input_definition/validation/rules/strings_array_validation.ts +++ /dev/null @@ -1,56 +0,0 @@ -import R from 'ramda' - -import type { CalculationInputValue } from '../../../../../../types/calculations.types' -import type { StringsArrayInputType } from '../../../../../../types/calculations/inputs/calculation-inputs.types' -import type { LabelType } from '../../../../../../types/localization.types' -import { is_answer_one_of_the_allowed_answers } from './helpers/is_answer_one_of_the_allowed_answers' - -export const strings_array_validation = ( - input_value: CalculationInputValue, - input_type: StringsArrayInputType -): { - valid: boolean - reason?: LabelType -} => { - if (!Array.isArray(input_value)) { - return { - valid: false, - reason: { en: 'Passed value is not an array.' }, - } - } - - if (input_value.length === 0) { - return { valid: true } - } - - if (input_value.every(val => typeof val !== 'string')) - return { - valid: false, - reason: { en: 'Not all values in the array are strings.' }, - } - - /** - * Is there a list of discrete allowed answers? - * If yes: check if all the strings in the array match - * the allowed answers. - */ - const { allowed_answers } = input_type - - if (!R.isNil(allowed_answers)) { - if ( - !input_value.every(val => - is_answer_one_of_the_allowed_answers(val, allowed_answers) - ) - ) - return { - valid: false, - reason: { - en: 'Not all strings in the array are one of the allowed strings.', - }, - } - } - - return { - valid: true, - } -} diff --git a/src/calculation_suite/helper_functions/calculation_variants/api/input/lenses/allowedAnswersLens.ts b/src/calculation_suite/helper_functions/calculation_variants/api/input/lenses/allowedAnswersLens.ts deleted file mode 100644 index 5c5864b..0000000 --- a/src/calculation_suite/helper_functions/calculation_variants/api/input/lenses/allowedAnswersLens.ts +++ /dev/null @@ -1,6 +0,0 @@ -import R from 'ramda' - -export const Path = ['input_type', 'allowed_answers'] - - -export const allowedAnswersLens = R.lensPath(Path) diff --git a/src/calculation_suite/helper_functions/calculation_variants/api/input/lenses/index.ts b/src/calculation_suite/helper_functions/calculation_variants/api/input/lenses/index.ts deleted file mode 100644 index 27593d4..0000000 --- a/src/calculation_suite/helper_functions/calculation_variants/api/input/lenses/index.ts +++ /dev/null @@ -1,14 +0,0 @@ -export { inputIdLens } from './inputIdLens' -export { inputTypeLens } from './inputTypeLens' -export { inputInverseLens } from './inputInverseLens' -export { inputRequiredLens } from './inputRequiredLens' -export { rawInputValueLens } from './rawInputValueLens' -export { stdInputValueLens } from './stdInputValueLens' -export { allowedAnswersLens } from './allowedAnswersLens' -export { inputFormatLens } from './inputFormatLens' -export { inputInfoLens } from './inputInfoLens' -export { inputLabelLens } from './inputLabelLens' -export { notApplicableIfLens } from './notApplicableIfLens' -export { notApplicableInputLens } from './notApplicableInputLens' -export { notApplicableScoreLens } from './notApplicableScoreLens' -export { rangeLens } from './rangeLens' diff --git a/src/calculation_suite/helper_functions/calculation_variants/api/input/lenses/inputFormatLens.ts b/src/calculation_suite/helper_functions/calculation_variants/api/input/lenses/inputFormatLens.ts deleted file mode 100644 index 1a1e605..0000000 --- a/src/calculation_suite/helper_functions/calculation_variants/api/input/lenses/inputFormatLens.ts +++ /dev/null @@ -1,5 +0,0 @@ -import R from 'ramda' - -export const Path = ['format'] - -export const inputFormatLens = R.lensPath(Path) diff --git a/src/calculation_suite/helper_functions/calculation_variants/api/input/lenses/inputIdLens.ts b/src/calculation_suite/helper_functions/calculation_variants/api/input/lenses/inputIdLens.ts deleted file mode 100644 index 3a63430..0000000 --- a/src/calculation_suite/helper_functions/calculation_variants/api/input/lenses/inputIdLens.ts +++ /dev/null @@ -1,5 +0,0 @@ -import R from 'ramda' - -export const Path = ['input_id'] - -export const inputIdLens = R.lensPath(Path) diff --git a/src/calculation_suite/helper_functions/calculation_variants/api/input/lenses/inputInfoLens.ts b/src/calculation_suite/helper_functions/calculation_variants/api/input/lenses/inputInfoLens.ts deleted file mode 100644 index 0a34092..0000000 --- a/src/calculation_suite/helper_functions/calculation_variants/api/input/lenses/inputInfoLens.ts +++ /dev/null @@ -1,5 +0,0 @@ -import R from 'ramda' - -export const Path = ['info'] - -export const inputInfoLens = R.lensPath(Path) diff --git a/src/calculation_suite/helper_functions/calculation_variants/api/input/lenses/inputInverseLens.ts b/src/calculation_suite/helper_functions/calculation_variants/api/input/lenses/inputInverseLens.ts deleted file mode 100644 index 527266f..0000000 --- a/src/calculation_suite/helper_functions/calculation_variants/api/input/lenses/inputInverseLens.ts +++ /dev/null @@ -1,5 +0,0 @@ -import R from 'ramda' - -export const Path = ['inverse'] - -export const inputInverseLens = R.lensPath(Path) diff --git a/src/calculation_suite/helper_functions/calculation_variants/api/input/lenses/inputLabelLens.ts b/src/calculation_suite/helper_functions/calculation_variants/api/input/lenses/inputLabelLens.ts deleted file mode 100644 index 9b15e0c..0000000 --- a/src/calculation_suite/helper_functions/calculation_variants/api/input/lenses/inputLabelLens.ts +++ /dev/null @@ -1,5 +0,0 @@ -import R from 'ramda' - -export const Path = ['input_label'] - -export const inputLabelLens = R.lensPath(Path) diff --git a/src/calculation_suite/helper_functions/calculation_variants/api/input/lenses/inputRequiredLens.ts b/src/calculation_suite/helper_functions/calculation_variants/api/input/lenses/inputRequiredLens.ts deleted file mode 100644 index 89cc559..0000000 --- a/src/calculation_suite/helper_functions/calculation_variants/api/input/lenses/inputRequiredLens.ts +++ /dev/null @@ -1,5 +0,0 @@ -import R from 'ramda' - -export const Path = ['required'] - -export const inputRequiredLens = R.lensPath(Path) diff --git a/src/calculation_suite/helper_functions/calculation_variants/api/input/lenses/inputTypeLens.ts b/src/calculation_suite/helper_functions/calculation_variants/api/input/lenses/inputTypeLens.ts deleted file mode 100644 index 16d71b5..0000000 --- a/src/calculation_suite/helper_functions/calculation_variants/api/input/lenses/inputTypeLens.ts +++ /dev/null @@ -1,5 +0,0 @@ -import R from 'ramda' - -export const Path = ['input_type'] - -export const inputTypeLens = R.lensPath(Path) diff --git a/src/calculation_suite/helper_functions/calculation_variants/api/input/lenses/notApplicableIfLens.ts b/src/calculation_suite/helper_functions/calculation_variants/api/input/lenses/notApplicableIfLens.ts deleted file mode 100644 index e7d84fe..0000000 --- a/src/calculation_suite/helper_functions/calculation_variants/api/input/lenses/notApplicableIfLens.ts +++ /dev/null @@ -1,5 +0,0 @@ -import R from 'ramda' - -export const Path = ['not_applicable_if'] - -export const notApplicableIfLens = R.lensPath(Path) diff --git a/src/calculation_suite/helper_functions/calculation_variants/api/input/lenses/notApplicableInputLens.ts b/src/calculation_suite/helper_functions/calculation_variants/api/input/lenses/notApplicableInputLens.ts deleted file mode 100644 index a051526..0000000 --- a/src/calculation_suite/helper_functions/calculation_variants/api/input/lenses/notApplicableInputLens.ts +++ /dev/null @@ -1,8 +0,0 @@ -import R from 'ramda' - -import { Path as notApplicableIfPath } from './notApplicableIfLens' - -export const Path = [...notApplicableIfPath, 'input'] - - -export const notApplicableInputLens = R.lensPath(Path) diff --git a/src/calculation_suite/helper_functions/calculation_variants/api/input/lenses/notApplicableScoreLens.ts b/src/calculation_suite/helper_functions/calculation_variants/api/input/lenses/notApplicableScoreLens.ts deleted file mode 100644 index abb289c..0000000 --- a/src/calculation_suite/helper_functions/calculation_variants/api/input/lenses/notApplicableScoreLens.ts +++ /dev/null @@ -1,8 +0,0 @@ -import R from 'ramda' - -import { Path as notApplicableIfPath } from './notApplicableIfLens' - -export const Path = [...notApplicableIfPath, 'not_applicable_score'] - - -export const notApplicableScoreLens = R.lensPath(Path) diff --git a/src/calculation_suite/helper_functions/calculation_variants/api/input/lenses/rangeLens.ts b/src/calculation_suite/helper_functions/calculation_variants/api/input/lenses/rangeLens.ts deleted file mode 100644 index a3b3a83..0000000 --- a/src/calculation_suite/helper_functions/calculation_variants/api/input/lenses/rangeLens.ts +++ /dev/null @@ -1,6 +0,0 @@ -import R from 'ramda' - -export const Path = ['input_type', 'range'] - - -export const rangeLens = R.lensPath(Path) diff --git a/src/calculation_suite/helper_functions/calculation_variants/api/input/lenses/rawInputValueLens.ts b/src/calculation_suite/helper_functions/calculation_variants/api/input/lenses/rawInputValueLens.ts deleted file mode 100644 index 426f356..0000000 --- a/src/calculation_suite/helper_functions/calculation_variants/api/input/lenses/rawInputValueLens.ts +++ /dev/null @@ -1,5 +0,0 @@ -import R from 'ramda' - -export const Path = ['raw_input_value'] - -export const rawInputValueLens = R.lensPath(Path) diff --git a/src/calculation_suite/helper_functions/calculation_variants/api/input/lenses/stdInputValueLens.ts b/src/calculation_suite/helper_functions/calculation_variants/api/input/lenses/stdInputValueLens.ts deleted file mode 100644 index 2714e47..0000000 --- a/src/calculation_suite/helper_functions/calculation_variants/api/input/lenses/stdInputValueLens.ts +++ /dev/null @@ -1,5 +0,0 @@ -import R from 'ramda' - -export const Path = ['std_value'] - -export const stdInputValueLens = R.lensPath(Path) diff --git a/src/calculation_suite/helper_functions/calculation_variants/api/subscale/lenses/index.ts b/src/calculation_suite/helper_functions/calculation_variants/api/subscale/lenses/index.ts deleted file mode 100644 index eb60e77..0000000 --- a/src/calculation_suite/helper_functions/calculation_variants/api/subscale/lenses/index.ts +++ /dev/null @@ -1,7 +0,0 @@ -export { scoreLens } from './scoreLens' -export { inputsInSubscaleLens } from './inputsInSubscaleLens' -export { subscaleIdLens } from './subscaleIdLens' -export { notApplicableIfLens } from './notApplicableIfLens' -export { notApplicableScoreLens } from './notApplicableScoreLens' -export { notApplicableSubscaleLens } from './notApplicableSubscaleLens' -export { labelLens } from './labelLens' diff --git a/src/calculation_suite/helper_functions/calculation_variants/api/subscale/lenses/inputsInSubscaleLens.ts b/src/calculation_suite/helper_functions/calculation_variants/api/subscale/lenses/inputsInSubscaleLens.ts deleted file mode 100644 index e7d7b25..0000000 --- a/src/calculation_suite/helper_functions/calculation_variants/api/subscale/lenses/inputsInSubscaleLens.ts +++ /dev/null @@ -1,5 +0,0 @@ -import R from 'ramda' - -export const Path = ['input_ids_in_subscale'] - -export const inputsInSubscaleLens = R.lensPath(Path) diff --git a/src/calculation_suite/helper_functions/calculation_variants/api/subscale/lenses/labelLens.ts b/src/calculation_suite/helper_functions/calculation_variants/api/subscale/lenses/labelLens.ts deleted file mode 100644 index a44efd4..0000000 --- a/src/calculation_suite/helper_functions/calculation_variants/api/subscale/lenses/labelLens.ts +++ /dev/null @@ -1,5 +0,0 @@ -import R from 'ramda' - -export const Path = ['label'] - -export const labelLens = R.lensPath(Path) diff --git a/src/calculation_suite/helper_functions/calculation_variants/api/subscale/lenses/notApplicableIfLens.ts b/src/calculation_suite/helper_functions/calculation_variants/api/subscale/lenses/notApplicableIfLens.ts deleted file mode 100644 index e7d84fe..0000000 --- a/src/calculation_suite/helper_functions/calculation_variants/api/subscale/lenses/notApplicableIfLens.ts +++ /dev/null @@ -1,5 +0,0 @@ -import R from 'ramda' - -export const Path = ['not_applicable_if'] - -export const notApplicableIfLens = R.lensPath(Path) diff --git a/src/calculation_suite/helper_functions/calculation_variants/api/subscale/lenses/notApplicableScoreLens.ts b/src/calculation_suite/helper_functions/calculation_variants/api/subscale/lenses/notApplicableScoreLens.ts deleted file mode 100644 index abb289c..0000000 --- a/src/calculation_suite/helper_functions/calculation_variants/api/subscale/lenses/notApplicableScoreLens.ts +++ /dev/null @@ -1,8 +0,0 @@ -import R from 'ramda' - -import { Path as notApplicableIfPath } from './notApplicableIfLens' - -export const Path = [...notApplicableIfPath, 'not_applicable_score'] - - -export const notApplicableScoreLens = R.lensPath(Path) diff --git a/src/calculation_suite/helper_functions/calculation_variants/api/subscale/lenses/notApplicableSubscaleLens.ts b/src/calculation_suite/helper_functions/calculation_variants/api/subscale/lenses/notApplicableSubscaleLens.ts deleted file mode 100644 index 2d40e9f..0000000 --- a/src/calculation_suite/helper_functions/calculation_variants/api/subscale/lenses/notApplicableSubscaleLens.ts +++ /dev/null @@ -1,8 +0,0 @@ -import R from 'ramda' - -import { Path as notApplicableIfPath } from './notApplicableIfLens' - -export const Path = [...notApplicableIfPath, 'subscale'] - - -export const notApplicableSubscaleLens = R.lensPath(Path) diff --git a/src/calculation_suite/helper_functions/calculation_variants/api/subscale/lenses/scoreLens.ts b/src/calculation_suite/helper_functions/calculation_variants/api/subscale/lenses/scoreLens.ts deleted file mode 100644 index 1fb5c78..0000000 --- a/src/calculation_suite/helper_functions/calculation_variants/api/subscale/lenses/scoreLens.ts +++ /dev/null @@ -1,5 +0,0 @@ -import R from 'ramda' - -export const Path = ['score'] - -export const scoreLens = R.lensPath(Path) diff --git a/src/calculation_suite/helper_functions/calculation_variants/api/subscale/lenses/subscaleIdLens.ts b/src/calculation_suite/helper_functions/calculation_variants/api/subscale/lenses/subscaleIdLens.ts deleted file mode 100644 index 8445d95..0000000 --- a/src/calculation_suite/helper_functions/calculation_variants/api/subscale/lenses/subscaleIdLens.ts +++ /dev/null @@ -1,5 +0,0 @@ -import R from 'ramda' - -export const Path = ['id'] - -export const subscaleIdLens = R.lensPath(Path) diff --git a/src/calculation_suite/helper_functions/calculation_variants/calculation_with_subscales/add_response_values_to_subscale_inputs/add_response_values_to_subscale_inputs.ts b/src/calculation_suite/helper_functions/calculation_variants/calculation_with_subscales/add_response_values_to_subscale_inputs/add_response_values_to_subscale_inputs.ts deleted file mode 100644 index 3d8b721..0000000 --- a/src/calculation_suite/helper_functions/calculation_variants/calculation_with_subscales/add_response_values_to_subscale_inputs/add_response_values_to_subscale_inputs.ts +++ /dev/null @@ -1,25 +0,0 @@ -import R from 'ramda' - -import type { - DefaultSubscaleType, - IncomingCalculationInputType, -} from '../../../../../types/calculations.types' -import type { CustomSubscalesType } from '../../../../../types/calculations/subscales/custom' -import { inputsInSubscaleLens } from '../../api/subscale/lenses' -import { add_raw_values_to_inputs } from '../../shared/add_raw_values_to_inputs' - -export const add_response_values_to_subscale_inputs = - (response: IncomingCalculationInputType) => - ( - subscales: DefaultSubscaleType[] | CustomSubscalesType - ): DefaultSubscaleType[] | CustomSubscalesType => - R.map(subscale => { - const inputs_with_answer_values = R.compose( - //@ts-expect-error add types - inputs => add_raw_values_to_inputs(inputs)(response), - R.defaultTo([]), - R.view(inputsInSubscaleLens) - )(subscale) - - return R.set(inputsInSubscaleLens, inputs_with_answer_values, subscale) - }, subscales) diff --git a/src/calculation_suite/helper_functions/calculation_variants/calculation_with_subscales/add_standardized_values_to_subscale_inputs/add_standardized_values_to_subscale_inputs.ts b/src/calculation_suite/helper_functions/calculation_variants/calculation_with_subscales/add_standardized_values_to_subscale_inputs/add_standardized_values_to_subscale_inputs.ts deleted file mode 100644 index df9abd7..0000000 --- a/src/calculation_suite/helper_functions/calculation_variants/calculation_with_subscales/add_standardized_values_to_subscale_inputs/add_standardized_values_to_subscale_inputs.ts +++ /dev/null @@ -1,68 +0,0 @@ -import R from 'ramda' - -import { - type InputType, - type StandardizationSerieType, - type SubscaleType, -} from '../../../../../types/calculations.types' -import { MISSING_MESSAGE } from '../../../../PARAMETERS' -import { - inputIdLens, - rawInputValueLens, - stdInputValueLens, -} from '../../api/input/lenses' -import { inputsInSubscaleLens } from '../../api/subscale/lenses' - -export const add_standardized_values_to_subscale_inputs = - ({ - standardization_table, - readable_calculation_name = 'Score', - }: { - standardization_table: Array - readable_calculation_name: string - }) => - (subscales: Array): Array => { - const add_standardized_value_to_input = (input: InputType) => { - const input_id = R.view(inputIdLens, input) - const raw_value = R.view(rawInputValueLens, input) - - //@ts-expect-error add types - const conversion_table = R.compose( - R.prop('conversion_table'), - //@ts-expect-error add types - R.find(serie => serie.items.includes(input_id)) - )(standardization_table) - - //@ts-expect-error add types - const std_value = R.compose( - R.prop('std'), - //@ts-expect-error add types - R.find(entry => entry.raw === Number(raw_value)) - )(conversion_table) - - if (R.isNil(std_value) && raw_value !== MISSING_MESSAGE) - throw new Error( - `${readable_calculation_name} could not be calculated because we weren't able to find a standardized value for input id ${input_id} with raw value ${raw_value}` - ) - - return R.set( - stdInputValueLens, - R.defaultTo(MISSING_MESSAGE)(std_value), - input - ) - } - - return R.map((subscale: SubscaleType) => { - const inputs_with_standardized_values = R.compose( - R.map(add_standardized_value_to_input), - R.defaultTo([]), - R.view(inputsInSubscaleLens) - )(subscale) - - return R.set( - inputsInSubscaleLens, - inputs_with_standardized_values, - subscale - ) - }, subscales) - } diff --git a/src/calculation_suite/helper_functions/calculation_variants/calculation_with_subscales/index.ts b/src/calculation_suite/helper_functions/calculation_variants/calculation_with_subscales/index.ts deleted file mode 100644 index 3596d11..0000000 --- a/src/calculation_suite/helper_functions/calculation_variants/calculation_with_subscales/index.ts +++ /dev/null @@ -1,2 +0,0 @@ -export { add_response_values_to_subscale_inputs } from './add_response_values_to_subscale_inputs/add_response_values_to_subscale_inputs' -export { add_standardized_values_to_subscale_inputs } from './add_standardized_values_to_subscale_inputs/add_standardized_values_to_subscale_inputs' diff --git a/src/calculation_suite/helper_functions/calculation_variants/shared/add_raw_values_to_inputs.ts b/src/calculation_suite/helper_functions/calculation_variants/shared/add_raw_values_to_inputs.ts deleted file mode 100644 index 34308fd..0000000 --- a/src/calculation_suite/helper_functions/calculation_variants/shared/add_raw_values_to_inputs.ts +++ /dev/null @@ -1,26 +0,0 @@ -import R from 'ramda' - -import type { - IncomingCalculationInputType, - InputType, -} from '../../../../types/calculations.types' -import type { CustomInputsType } from '../../../../types/calculations/inputs/custom' -import { MISSING_MESSAGE } from '../../../PARAMETERS' -import { inputIdLens, rawInputValueLens } from '../api/input/lenses' - -export const add_raw_values_to_inputs = - (inputs: InputType[] | CustomInputsType) => - (calculation_input: IncomingCalculationInputType): Array => { - const add_raw_value_to_input = (input: InputType): InputType => { - const input_id = R.view(inputIdLens, input) - const answer = R.compose( - R.defaultTo(MISSING_MESSAGE), - //@ts-expect-error add types - R.prop(input_id) - )(calculation_input) - - return R.set(rawInputValueLens, answer, input) - } - - return R.map(add_raw_value_to_input, inputs) - } diff --git a/src/calculation_suite/helper_functions/calculation_variants/shared/do_all_required_inputs_have_a_valid_value.ts b/src/calculation_suite/helper_functions/calculation_variants/shared/do_all_required_inputs_have_a_valid_value.ts deleted file mode 100644 index 40953b8..0000000 --- a/src/calculation_suite/helper_functions/calculation_variants/shared/do_all_required_inputs_have_a_valid_value.ts +++ /dev/null @@ -1,39 +0,0 @@ -import R from 'ramda' - -import { type InputType } from '../../../../types/calculations.types' -import type { CustomInputsType } from '../../../../types/calculations/inputs/custom' -import { MISSING_MESSAGE } from '../../../PARAMETERS' -import { inputRequiredLens, rawInputValueLens } from '../api/input/lenses' - -export const get_valid_values = ( - inputs: InputType[] | CustomInputsType -): number[] => { - const is_numeric = (answer: any): boolean => - typeof answer === 'number' && !Number.isNaN(answer) - - //@ts-expect-error add types - return R.compose( - R.defaultTo([]), - R.filter(is_numeric), - R.map(answer => Number(answer)), - R.filter(answer => answer !== MISSING_MESSAGE), - R.map(input => R.view(rawInputValueLens, input)) - )(inputs) -} - -export const do_all_required_inputs_have_a_valid_value = ( - inputs: InputType[] | CustomInputsType -): boolean => { - //@ts-expect-error add types - const nbr_of_required_inputs = R.compose( - R.length, - R.filter(required => required === true), - R.map(input => R.view(inputRequiredLens, input)) - )(inputs) - - const valid_answers = get_valid_values(inputs) - - if (valid_answers.length !== nbr_of_required_inputs) return false - - return true -} diff --git a/src/calculation_suite/helper_functions/calculation_variants/simple_calculation/index.ts b/src/calculation_suite/helper_functions/calculation_variants/simple_calculation/index.ts deleted file mode 100644 index 46284d6..0000000 --- a/src/calculation_suite/helper_functions/calculation_variants/simple_calculation/index.ts +++ /dev/null @@ -1,3 +0,0 @@ -export { add_raw_values_to_inputs } from '../shared/add_raw_values_to_inputs' -export { do_all_required_inputs_have_a_valid_value } from '../shared/do_all_required_inputs_have_a_valid_value' -export { get_valid_values } from '../shared/do_all_required_inputs_have_a_valid_value' diff --git a/src/calculation_suite/helper_functions/create_calculation/create_calculation.ts b/src/calculation_suite/helper_functions/create_calculation/create_calculation.ts deleted file mode 100644 index fa1a28d..0000000 --- a/src/calculation_suite/helper_functions/create_calculation/create_calculation.ts +++ /dev/null @@ -1,63 +0,0 @@ -import R from 'ramda' - -import type { - CalculationInputType, - CalculationOutputDefinition, - CalculationType, - DefaultSubscaleType, - InputType, - SpecificStepsType, -} from '../../../types/calculations.types' -import type { CustomInputsType } from '../../../types/calculations/inputs/custom' -import type { CustomSubscalesType } from '../../../types/calculations/subscales/custom' -import type { LabelType } from '../../../types/localization.types' -import { create_calculation_pipeline } from '../calculation_pipeline/create_calculation_pipeline' -import { get_calculation_blueprint_from_definition } from './get_calculation_blueprint_from_definition' -import { parse_readme_to_html } from './parse_readme_to_html' - -type FunctionInputType = { - calculation_name: LabelType | string - readme_location: string - calculation_steps: SpecificStepsType - calculation_definition: { - input_definition: - | InputType[] - | DefaultSubscaleType[] - | CustomSubscalesType - | CustomInputsType - output_definition: CalculationOutputDefinition[] - } - calculation_additional_inputs?: InputType[] - is_private?: boolean -} - -export const create_calculation = ({ - calculation_name, - readme_location, - calculation_steps, - calculation_definition, - calculation_additional_inputs, - is_private, -}: FunctionInputType): CalculationType => { - const calculation_description = parse_readme_to_html(readme_location) - const is_calculation_private = R.defaultTo(false, is_private) - const calculation_function = (input: CalculationInputType) => - create_calculation_pipeline(calculation_steps)(input) - - return { - calculation_name: - typeof calculation_name === 'string' - ? { en: calculation_name } - : calculation_name, - calculation_description: { en: calculation_description }, - calculation_function, - calculation_blueprint: { - input_definition: get_calculation_blueprint_from_definition({ - calculation_definition: calculation_definition.input_definition, - additional_inputs: calculation_additional_inputs, - }), - output_definition: calculation_definition.output_definition, - }, - is_private: is_calculation_private, - } -} diff --git a/src/calculation_suite/helper_functions/create_calculation/get_calculation_blueprint_from_definition/get_calculation_blueprint_from_definition.ts b/src/calculation_suite/helper_functions/create_calculation/get_calculation_blueprint_from_definition/get_calculation_blueprint_from_definition.ts deleted file mode 100644 index 49cc029..0000000 --- a/src/calculation_suite/helper_functions/create_calculation/get_calculation_blueprint_from_definition/get_calculation_blueprint_from_definition.ts +++ /dev/null @@ -1,85 +0,0 @@ -import R from 'ramda' - -import type { - CalculationParameter, - DefaultSubscaleType, - InputType, -} from '../../../../types/calculations.types' -import type { CustomInputsType } from '../../../../types/calculations/inputs/custom' -import type { CustomSubscalesType } from '../../../../types/calculations/subscales/custom' -import { - inputFormatLens, - inputIdLens, - inputInfoLens, - inputLabelLens, - inputTypeLens, - notApplicableIfLens, -} from '../../calculation_variants/api/input/lenses' -import { inputsInSubscaleLens } from '../../calculation_variants/api/subscale/lenses' - -type FunctionInputType = { - calculation_definition: - | InputType[] - | DefaultSubscaleType[] - | CustomSubscalesType - | CustomInputsType - additional_inputs?: Array -} - -export const get_calculation_blueprint_from_definition = ({ - calculation_definition, - additional_inputs = [], -}: FunctionInputType): CalculationParameter[] => { - const get_parameters = (input: InputType) => ({ - id: R.view(inputIdLens, input), - label: R.view(inputLabelLens, input), - info: R.view(inputInfoLens, input), - input_type: R.compose(R.view(inputTypeLens))(input), - format: R.view(inputFormatLens, input), - not_applicable_if: R.view(notApplicableIfLens, input), - }) - - /** - * To check whether the incoming definition is an array of subscales - * or an array of inputs we check whether the first element in the array - * has 'input_ids_in_subscale" key. If yes, we know we are working with subscales. - */ - const definition_is_a_subscale_type = R.compose( - R.view(inputsInSubscaleLens), - R.head - )(calculation_definition) - - let all_calculation_parameters = [] - - if (definition_is_a_subscale_type) { - all_calculation_parameters = [ - ...R.compose( - R.map(get_parameters), - R.flatten, - R.map(R.view(inputsInSubscaleLens)) - )(calculation_definition), - ...additional_inputs.map(get_parameters), - ].sort((a, b) => { - const idA = a.id.toUpperCase() // ignore upper and lowercase - const idB = b.id.toUpperCase() // ignore upper and lowercase - if (idA < idB) { - return -1 - } - - if (idA > idB) { - return 1 - } - - // names must be equal - return 0 - }) - } else { - all_calculation_parameters = [ - //@ts-expect-error add types - ...calculation_definition.map(get_parameters), - ...additional_inputs.map(get_parameters), - ] - } - - return all_calculation_parameters -} diff --git a/src/calculation_suite/helper_functions/create_calculation/get_calculation_blueprint_from_definition/index.ts b/src/calculation_suite/helper_functions/create_calculation/get_calculation_blueprint_from_definition/index.ts deleted file mode 100644 index 5258b7c..0000000 --- a/src/calculation_suite/helper_functions/create_calculation/get_calculation_blueprint_from_definition/index.ts +++ /dev/null @@ -1 +0,0 @@ -export { get_calculation_blueprint_from_definition } from './get_calculation_blueprint_from_definition' diff --git a/src/calculation_suite/helper_functions/create_calculation/index.ts b/src/calculation_suite/helper_functions/create_calculation/index.ts deleted file mode 100644 index 99f6ccf..0000000 --- a/src/calculation_suite/helper_functions/create_calculation/index.ts +++ /dev/null @@ -1 +0,0 @@ -export { create_calculation } from './create_calculation' diff --git a/src/calculation_suite/helper_functions/execute_test_calculation/execute_test_calculation.ts b/src/calculation_suite/helper_functions/execute_test_calculation/execute_test_calculation.ts deleted file mode 100644 index 096fbb2..0000000 --- a/src/calculation_suite/helper_functions/execute_test_calculation/execute_test_calculation.ts +++ /dev/null @@ -1,22 +0,0 @@ -import type { - CalculationOutputType, - CalculationType, - IncomingCalculationInputType, -} from '../../../types/calculations.types' - -type FunctionType = ( - calculation: CalculationType -) => ( - calculation_input: IncomingCalculationInputType -) => CalculationOutputType[] - -export const execute_test_calculation: FunctionType = - calculation => calculation_input => { - const calculation_function = calculation.calculation_function - - return calculation_function({ - calculation_id: calculation.calculation_name.en || '', - calculation_blueprint: calculation.calculation_blueprint, - calculation_input, - }) - } diff --git a/src/calculation_suite/helper_functions/execute_test_calculation/index.ts b/src/calculation_suite/helper_functions/execute_test_calculation/index.ts deleted file mode 100644 index 09569d4..0000000 --- a/src/calculation_suite/helper_functions/execute_test_calculation/index.ts +++ /dev/null @@ -1 +0,0 @@ -export { execute_test_calculation } from './execute_test_calculation' diff --git a/src/calculation_suite/helper_functions/get_result_ids_from_calculation_output/get_result_ids_from_calculation_output.ts b/src/calculation_suite/helper_functions/get_result_ids_from_calculation_output/get_result_ids_from_calculation_output.ts deleted file mode 100644 index f0058ba..0000000 --- a/src/calculation_suite/helper_functions/get_result_ids_from_calculation_output/get_result_ids_from_calculation_output.ts +++ /dev/null @@ -1,10 +0,0 @@ -import R from 'ramda' - -import type { CalculationOutputType } from '../../../types/calculations.types' - -type FunctionType = (calculation_output: CalculationOutputType[]) => string[] - -export const get_result_ids_from_calculation_output: FunctionType = - calculation_output => { - return R.flatten(calculation_output.map(result => result.subresult_id)) - } diff --git a/src/calculation_suite/helper_functions/get_result_ids_from_calculation_output/index.ts b/src/calculation_suite/helper_functions/get_result_ids_from_calculation_output/index.ts deleted file mode 100644 index 349f1c0..0000000 --- a/src/calculation_suite/helper_functions/get_result_ids_from_calculation_output/index.ts +++ /dev/null @@ -1 +0,0 @@ -export { get_result_ids_from_calculation_output } from './get_result_ids_from_calculation_output' diff --git a/src/calculation_suite/helper_functions/create_calculation/parse_readme_to_html/index.ts b/src/calculation_suite/helper_functions/parse_readme_to_html/index.ts similarity index 100% rename from src/calculation_suite/helper_functions/create_calculation/parse_readme_to_html/index.ts rename to src/calculation_suite/helper_functions/parse_readme_to_html/index.ts diff --git a/src/calculation_suite/helper_functions/create_calculation/parse_readme_to_html/parse_readme_to_html.ts b/src/calculation_suite/helper_functions/parse_readme_to_html/parse_readme_to_html.ts similarity index 100% rename from src/calculation_suite/helper_functions/create_calculation/parse_readme_to_html/parse_readme_to_html.ts rename to src/calculation_suite/helper_functions/parse_readme_to_html/parse_readme_to_html.ts diff --git a/src/calculation_suite/helper_functions/view_result/index.ts b/src/calculation_suite/helper_functions/view_result/index.ts deleted file mode 100644 index f73aef4..0000000 --- a/src/calculation_suite/helper_functions/view_result/index.ts +++ /dev/null @@ -1 +0,0 @@ -export { view_result } from './view_result' diff --git a/src/calculation_suite/helper_functions/view_result/view_result.ts b/src/calculation_suite/helper_functions/view_result/view_result.ts deleted file mode 100644 index 6dc4a8e..0000000 --- a/src/calculation_suite/helper_functions/view_result/view_result.ts +++ /dev/null @@ -1,21 +0,0 @@ -import R from 'ramda' - -import type { CalculationOutputType } from '../../../types/calculations.types' - -type FunctionType = ( - score_id?: string -) => (scores: CalculationOutputType[]) => unknown - -export const view_result: FunctionType = - (score_id = '') => - scores => { - /** If calculation only has one result/outcome - * => Return that one result - */ - if (scores.length === 1) return scores[0].result - - return R.compose( - (s: CalculationOutputType | undefined) => s?.result, - R.find((score: CalculationOutputType) => score.subresult_id === score_id) - )(scores) - } diff --git a/src/calculation_suite/helper_functions/view_status/index.ts b/src/calculation_suite/helper_functions/view_status/index.ts deleted file mode 100644 index 43f7f2a..0000000 --- a/src/calculation_suite/helper_functions/view_status/index.ts +++ /dev/null @@ -1 +0,0 @@ -export { view_status } from './view_status' diff --git a/src/calculation_suite/helper_functions/view_status/view_status.ts b/src/calculation_suite/helper_functions/view_status/view_status.ts deleted file mode 100644 index 395758c..0000000 --- a/src/calculation_suite/helper_functions/view_status/view_status.ts +++ /dev/null @@ -1,21 +0,0 @@ -import R from 'ramda' - -import type { CalculationOutputType } from '../../../types/calculations.types' - -type FunctionType = ( - score_id?: string -) => (scores: CalculationOutputType[]) => string - -export const view_status: FunctionType = - (score_id = '') => - scores => { - /** If calculation only has one result/outcome - * => Return that one result - */ - if (scores.length === 1) return scores[0].status - - return R.compose( - (subresult: CalculationOutputType | undefined) => subresult?.status || '', - R.find((score: CalculationOutputType) => score.subresult_id === score_id) - )(scores) - } diff --git a/src/types/calculations.types.ts b/src/types/calculations.types.ts index 27195a8..6275997 100644 --- a/src/types/calculations.types.ts +++ b/src/types/calculations.types.ts @@ -4,6 +4,7 @@ import type { } from './calculations/inputs/calculation-inputs.types' import type { CustomSubscaleType } from './calculations/subscales/custom' import type { LabelType } from './localization.types' +import type { CalculationType as NewCalculationType } from '../api/shared/classes/Calculation' export type CalculationInputKey = string export type CalculationInputValue = unknown @@ -47,8 +48,12 @@ export type CalculationOutputDefinition = { type: OutputTypes unit?: LabelType interpretation?: LabelType + terminology?: unknown } +export type SubresultIds = + OutputFields[number]['subresult_id'] + export type CalculationOutputType = { subresult_id: string label: LabelType @@ -146,5 +151,7 @@ export type CalculationType = { } export type CalculationsLibraryType = { - [key in CalculationScriptIdentifierType]: CalculationType + [key in CalculationScriptIdentifierType]: + | CalculationType + | NewCalculationType }