diff --git a/README.md b/README.md index a694c44..2339675 100644 --- a/README.md +++ b/README.md @@ -1,5 +1,5 @@ [![DOI](https://zenodo.org/badge/41293576.svg)](https://zenodo.org/badge/latestdoi/41293576) -# Supporting data and code for: Host plant species and insecticides shape the evolution of genetic and clonal diversity in a major aphid crop pest. +# Supporting data and code for: Host plant and insecticides shape the evolution of genetic and clonal diversity in a major aphid crop pest. *This repository contains the R code used for the data analyses and production of the figures of the related article* ![alt text](https://am3pap005files.storage.live.com/y4mYreq84FFO7c5QbHRcPq_gwGer7NpFG6AP_IzV6Kpuj8z8JbcXNM9oVmCSUctcKa5FBnkGf1ynAGrDfFyJ3edz0V32Hzq1CtjWM3W2aQLIIE22rLzrmcupjoDUHIpnpmQzGIPPVdGiGmQ_02sx5gEkEaWWDuYETn7CgStK8A82doj8SPspdcFp-P9AJIrYa_x?width=1584&height=588&cropmode=none) diff --git a/session_info.txt b/session_info.txt index c10da8c..fc27836 100644 --- a/session_info.txt +++ b/session_info.txt @@ -8,7 +8,7 @@ collate French_France.1252 ctype French_France.1252 tz Europe/Paris - date 2022-04-29 + date 2022-05-11 rstudio 2021.09.2+382 Ghost Orchid (desktop) pandoc NA @@ -19,7 +19,7 @@ ape * 5.6-2 2022-03-02 [1] CRAN (R 4.1.3) assertthat 0.2.1 2019-03-21 [1] CRAN (R 4.1.0) boot 1.3-28 2021-05-03 [2] CRAN (R 4.1.2) - cli 3.2.0 2022-02-14 [1] CRAN (R 4.1.2) + cli 3.3.0 2022-04-25 [1] CRAN (R 4.1.3) cluster 2.1.2 2021-04-17 [2] CRAN (R 4.1.2) codetools 0.2-18 2020-11-04 [2] CRAN (R 4.1.2) colorspace 2.0-3 2022-02-21 [1] CRAN (R 4.1.2) @@ -28,20 +28,20 @@ data.table * 1.14.2 2021-09-27 [1] CRAN (R 4.1.1) DBI 1.1.2 2021-12-20 [1] CRAN (R 4.1.2) digest 0.6.29 2021-12-01 [1] CRAN (R 4.1.2) - dplyr * 1.0.8 2022-02-08 [1] CRAN (R 4.1.2) + dplyr * 1.0.9 2022-04-28 [1] CRAN (R 4.1.3) ellipsis 0.3.2 2021-04-29 [1] CRAN (R 4.1.0) fansi 1.0.3 2022-03-24 [1] CRAN (R 4.1.3) fastmap 1.1.0 2021-01-25 [1] CRAN (R 4.1.0) gdata * 2.18.0 2017-06-06 [1] CRAN (R 4.1.0) genepop * 1.1.7 2020-02-23 [1] CRAN (R 4.1.0) generics 0.1.2 2022-01-31 [1] CRAN (R 4.1.2) - ggplot2 3.3.5 2021-06-25 [1] CRAN (R 4.1.0) + ggplot2 3.3.6 2022-05-03 [1] CRAN (R 4.1.3) glue 1.6.2 2022-02-24 [1] CRAN (R 4.1.2) gtable 0.3.0 2019-03-25 [1] CRAN (R 4.1.0) gtools 3.9.2 2021-06-06 [1] CRAN (R 4.1.0) htmltools 0.5.2 2021-08-25 [1] CRAN (R 4.1.1) httpuv 1.6.5 2022-01-05 [1] CRAN (R 4.1.2) - igraph 1.3.0 2022-04-01 [1] CRAN (R 4.1.3) + igraph 1.3.1 2022-04-20 [1] CRAN (R 4.1.3) later 1.3.0 2021-08-18 [1] CRAN (R 4.1.0) lattice * 0.20-45 2021-09-22 [2] CRAN (R 4.1.2) LDheatmap * 1.0-6 2022-04-24 [1] CRAN (R 4.1.3) @@ -76,7 +76,7 @@ stringi 1.7.6 2021-11-29 [1] CRAN (R 4.1.2) stringr 1.4.0 2019-02-10 [1] CRAN (R 4.1.0) terra 1.5-21 2022-02-17 [1] CRAN (R 4.1.2) - tibble 3.1.6 2021-11-07 [1] CRAN (R 4.1.2) + tibble 3.1.7 2022-05-03 [1] CRAN (R 4.1.3) tidyr * 1.2.0 2022-02-01 [1] CRAN (R 4.1.2) tidyselect 1.1.2 2022-02-21 [1] CRAN (R 4.1.2) utf8 1.2.2 2021-07-24 [1] CRAN (R 4.1.0)