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I am running into an numpy type error (see below) whenever I set value for the parameters mcmc==True or ci==0.95 in any convoys model. This is consistent across data sources and even occurs when using the example data sets. If I remove these parameters the code runs as expected with no errors. Is this something anyone else has come across? Any help is much appreciated!
TypeError: 'numpy.float64' object cannot be interpreted as an integer
---------------------------------------------------------------------------
TypeError Traceback (most recent call last)
<ipython-input-160-acdf74229cef> in <module>
----> 1 model_test.fit(X,B,T)
~/opt/anaconda3/lib/python3.8/site-packages/convoys/multi.py in fit(self, G, B, T)
29 for i, group in enumerate(G):
30 X[i,group] = 1
---> 31 self.base_model.fit(X, B, T)
32
33 def _get_x(self, group):
~/opt/anaconda3/lib/python3.8/site-packages/convoys/regression.py in fit(self, X, B, T, W)
267 ' %d walkers [' % n_walkers,
268 progressbar.AdaptiveETA(), ']'])
--> 269 for i, _ in enumerate(sampler.sample(p0, iterations=n_iterations)):
270 bar.update(i+1)
271 result['samples'] = sampler.chain[:, n_burnin:, :] \
~/opt/anaconda3/lib/python3.8/site-packages/emcee/ensemble.py in sample(self, initial_state, log_prob0, rstate0, blobs0, iterations, tune, skip_initial_state_check, thin_by, thin, store, progress, progress_kwargs)
377 checkpoint_step = thin_by
378 if store:
--> 379 self.backend.grow(iterations, state.blobs)
380
381 # Set up a wrapper around the relevant model functions
~/opt/anaconda3/lib/python3.8/site-packages/emcee/backends/backend.py in grow(self, ngrow, blobs)
173 self._check_blobs(blobs)
174 i = ngrow - (len(self.chain) - self.iteration)
--> 175 a = np.empty((i, self.nwalkers, self.ndim), dtype=self.dtype)
176 self.chain = np.concatenate((self.chain, a), axis=0)
177 a = np.empty((i, self.nwalkers), dtype=self.dtype)
TypeError: 'numpy.float64' object cannot be interpreted as an integer
The text was updated successfully, but these errors were encountered:
I am running into an numpy type error (see below) whenever I set value for the parameters
mcmc==True
orci==0.95
in any convoys model. This is consistent across data sources and even occurs when using the example data sets. If I remove these parameters the code runs as expected with no errors. Is this something anyone else has come across? Any help is much appreciated!The text was updated successfully, but these errors were encountered: